These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6191#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 4833 fasta sequence [CATGGCCGCCGGCGACCACCTGCGGCCGGGCTCCTACCTCGGCGACGTCTCCGCGCTCTCCTTCCTCCCCTCCTCCCCCCGCCCTCTTCTCCTCGCCGGCACCGGATCGGAGCTGCTCGTCTACGACGTCGACGCCGCCAGGCTTGTCGCCTCCTTCCAAGTGTTCGACGGCGTCCGCGTCCACGGCATCCAGCCCCGCTGCCCGGACGGCCCGTCTCCTGGCGATGTCACCGTGTTGGTGTTCGGTGAGAGGAGGGTGAAGATTTTCAGGATTCGCGCCGACTTCGAGGATGGCGAAGCGTGCGGCGTGCGGTTGGAGTTGGAGCAGAGGCTCCCCGGATTTGATCACTGGGTGCTGGACGCCTGCTTCCTGGAGGCTGATGGGCTGCTCGCGATCGGTTTGAGTGACAATTCAGTGGCATTATGGGATTTGAGCCAGCGTGTGTTGCATGCCCGAGTGAAATCGCCAGAGAAGTGCCTACTGTATTCGATGAGAATGTGGGGAAACTCTCTTGAATCTCTTCTCGTGGCTTCTGGAACAATTTTAAATGAGATTCTTATTTGGAAAATTGTACCCCGAGCTCTGGAAAAATCCTTGTTATGCTCATATAAGAGCAACACTCTCGGTGTAGAGGACTATGAGAATATGCATATTAGTGATAAGCAATATATAACAATTCATCTTGGAAGGTTAAAGGAACATGAAGGTTCAATATTTAGAATAGCTTGGTCCTCTGATGGATCAAAGTTCATGTCTGTTTCCGATGACCGTAGTGCTCGCATCTGGATGTTGAGTTCTCAGTCACAGAACTTTGTCAATAAGGCAGATGGACAAAATGATGTTCAGATTATACCGAAACTCACACTTTTTGGGCATAGTGCTAGAATATGGGATTGCTATGTATCTAATTCTTTAGTTATTACAGTCGGCGAGGATTGTTCTTGTTGCATCTGGGCTATGGACGGAAAGCTAATCAAGAAGTTCAGGGAACACATCGGCCGAGGAATATGGCGGTGTTTATATGATCCAAGCACACTACTGCTTGCCACTGCTGGGTTTGATTCAGCCATCAAAGTGCACCATCTTTATAACTCATCTTGTCATGACAAAATGGAAGACAAGGTGGTCTCAGACGATGTCAATTATGATTCTGAGGTCTTTTCAATATCATCCCCTACAGTGTCAGGACAGTATGGGCCCATGGACAGCAAAAGTGAGTATGTACGATACCTACACTTTGTAAAAGAAAATGATCTCTATGTTGCCACAAACAATGGATATCTGCATCATGCTGAGCTCTCTAATTCCAACAATGTAAGATGGACCAAGGTTACTCAAGTTGCTGAGGTGGCACCGATTATTTGCATGGATGTTATGGTAATGCACTCAGATATTTCACTGAATAGGGATGATATCATTGCCCTTGGAGATGGACGTGGAAATGTTACTGTTGTCCATTTAACTGCCTGTGATCTTGGACCTAAAGTGAATTCATCTTTTACCTGGCCAGCAGAAAAAGATAGGCAGCTACTAGGAGTATACTGGTGCAAATCTCTTGAATGTAGACACATTTTCACAGCTGATCCTAGAGGTGTGCTTAAGTTATGGGACATAAGGAATGCCCTTTTTTCAAATACCCTTGATATCACTACATCTCAGAAGGTTCCTCTTATTGCTGTGTTTGAATCTTCCTTTGGGGCAAGAATCATGTGCTTAGATGCGTTTCCTCAGGACGAGGTCCTTGTAGCTGGTGATAAGAAGGGTAACATAACTGCCTTTCACTTCCCTAAAGTACTGGTAGAACATGAGAGCTGTGGGACGCAACAGAATATGCCTTCATGTGATCGTTTTAAAGGAGCTCATGGAATTTCTAGTGTCACAAGTGTTCGTATAATTACCTCAACTTCTGATCATCTTCAAATTCACACCACAGGGGGAGACGGTTGCATTTGCTTTTTCAAGTATGACAGAAATGTGCAAAAGATTGAATTTTTTGGAATGAGACAAGTAAAAGAGTTGGGCACCGTTCAATCCATCTTTCCTCCTCATGCCTCAGAAAAGCAATTGCTTAGCACCTATGCAATAGGTTTCACTTCTGCCGATTTTATCATTTGGGACCTTGAAAATGAAACAAAGCTGCTTCAAATATCCTGTGGAGGGTGGCGCCGTCCTTATTCATATTATCTTGGCATGGTCCCTGAGTATCAGAATTGTTTTGCCTTTGTTAAGGATCATAACATTCACATTCATAGGCACTGGGCACCATGTCAAGACAAGAAATTGCTTCCTCAAGTTTTCCATATGCAGTTCCATGGAAGAGAAGTGCACTCTTTGTGCTTCATAGATCCAGCAGGCTATTCAAATCCTGAGAAGAGCTCAAATCTGTATATTGCAACAGGATGTGAAGATGGAACCATGCGACTTACAGGGAACTCAATTAATAGTGCTGGAAAATGGTGTTCCTCCAAGCTGCTGGGGGAGCATGTTGGTGGACCAGCTGTGAGAGCGACATGCTTCGTGCAGAAGGGCTACACATCGTTAGATAAATCATGTAACATCATCCCCAATGGCAACTCTGATGACACTTTAGTCAAAAACAAGGATAACATTTCCTTATTAATATCCGTTGGATCAAAGCAAGTCCTGACTACTTGGGTTTTACAGCCTAAGGTTGCAGAAAATAGACATATCTGTTCTAGTGGCTTAGATGTAGACTCCAAGCAAAGCTTGAAAGGTGATTCAGCCATGACATTTCAATGGCTTTCTACCCACATGCCTCCAAAGCTTACCAATAGGTTGAAAACTGGCAATGTAAAAAATAATAATGAGGAAGGGGATTCCTCTATGATGCAACCCAACCAGTTTATTGTGGATCAGCTGGAAAATGACTGGCGTTATCTTTCGGTTACAGCATTTCTTTTGGAACATCCTTCCACCAATTCGACAGTGTGTTTTGTTGTTGCTGCTTGCTCTGACGCTACAGTCGTGCTCCGTGCTCTTCTTTTGCCTTCTAGGCTATGGTTTGATGTTGCCTTGTTGGCTCCACAGGGATCACCAGTTCTGGTGCTCAAGCATATTATTGCTGCAGCTAGTGTCAACTGCAAAGACACCGCAGACCATGGAGATACATACATTGTTGTGAGTGGATCTACAGATGGTAGCATTACTTTCTGGGACCTTACAGATACTATTCATGGATTTATGCAACTAGTATCAGAGACTCAACCACACATGGTTATTGATTGCCAAAAGCGGCCCAGAACAGGAAGAGGAAGTCAAGGCGGTCGGCGCAGGTGGAGAACACTGCCGGGCCGTTCTTTGAAAAAGATAAATAAAGAGACATCGATCCCTGATGGGAGCATCCCGAATACTCCAAATGCCACTGAAAATACATCTGAAACTTCTAATGTGGAAGAAACTGATGCCACAAACCAGAACTATGCATTCTCAAATTTGCAATCGTGTAATATACCTGAAGTGACACCAATGCACAGATTCTCCGGTGTTCACCAGTCAGGCGTCAACTGCCTCCATGTCTCAGAGATGAGGGCTTGCTCGTACTCGACACCTGGCATGTCTTACTGTGTCATAAGCGGTGGGGATGATCAAGCTGTTCACTGTTTCAGTTTTACATTAGGATCTCTTCAGGATTGCGCAATAAATACAAGCCTAGACTCACCTGACAATGGTGCAGTTAAAATTATTTGTCAACATAGGGTTCCTTCTGCCCACAGTTCAGCAGTTAAAGGCATCTGGACGGATGGCATATGGGCTTTCTCTACTGGCCTTGATCAAAGAGTAAGATGTTGGAAGATGGAGTCATCTGGCAAATTCACTGAGTATTCCCATGCTATCATCAGCGTACCTGAGCCAGAAACTTTGGATGTTGTACATGACCGTGCAGAGAGGAAATACTGGGTTGCTGTTGCTGGAAGGGGAATGCAAATGGTTGAGTTCTTGTCAGCAGAAAATGACGAGGAAGAAATATCAAAATGACTCTTTTTTTTAGATGAGATGTTAGTTCATTTGGTGTGAAACAGGATGCCCACCAGAGAACTGGAATTTTATGTGGACTTCTGCAACTTGATCAAAACTTTGAAATATGTCAGGCAGAACGTACACAGCATGCCGACCAGGTTGGTGCGGGTCTGCTTGAACAACCTCATCGCGCTGATCGAGCAGTGGATTGTGCGAAGTTTAAGCTGTAGTGCTGTACTGATTTCACTCATGGTGGACGGTGACAATGGCAAGTGGAACTGTCCGTCTGTCCGTCCAAGTTGATGAGAGCTTGTCACCTAGTGGATTTTCCTGGCTGGACGAGCAGTGGCGGCGTGTCATGACAACTAGGAAGTATGCAACTAATGACTAACGTGACATGTTTGTTGGTAGGAGTGATTCTGCAATCTCTAACCGACCATGAACCCATGATGTTAACTGGTGAAAGATGACCAGATTCAAGAGTGATTCTGTAGATTCTTGAACCAGCCATGAGGCCGTGATGTTAACTGGTGATAAGTGATCAGATTCAAAAACATTATTTTTAGTATTGTAAAGGGCTTTGAGCTTCATCTAAGGTCCCTTTCTTTCTTTTTGCTGATGCTGTGGCAAACGTTTCTCAATTGTGGTGGCAGATGCTGCACAAGATGGTGTGCTTTGCTTTGGTCCTTCCTGGTCCATTTATTCCGTCAGTCAGGCTTTCAGACTTCAGAAGTTCAGAGACTTCATTTAAACTGGTGTGCCTCTGTCTAGAATCCTATGTTGACTGGAGTTATATATCTGTCTTGACCGGTCAATGCCCAAATTTTGATTGGTGATGATAAAACTTAAAACAA] [+] EMBL AK121627 [CATGGCCGCCGGCGACCACCTGCGGCCGGGCTCCTACCTCGGCGACGTCTCCGCGCTCTCCTTCCTCCCCTCCTCCCCCCGCCCTCTTCTCCTCGCCGGCACCGGATCGGAGCTGCTCGTCTACGACGTCGACGCCGCCAGGCTTGTCGCCTCCTTCCAAGTGTTCGACGGCGTCCGCGTCCACGGCATCCAGCCCCGCTGCCCGGACGGCCCGTCTCCTGGCGATGTCACCGTGTTGGTGTTCGGTGAGAGGAGGGTGAAGATTTTCAGGATTCGCGCCGACTTCGAGGATGGCGAAGCGTGCGGCGTGCGGTTGGAGTTGGAGCAGAGGCTCCCCGGATTTGATCACTGGGTGCTGGACGCCTGCTTCCTGGAGGCTGATGGGCTGCTCGCGATCGGTTTGAGTGACAATTCAGTGGCATTATGGGATTTGAGCCAGCGTGTGTTGCATGCCCGAGTGAAATCGCCAGAGAAGTGCCTACTGTATTCGATGAGAATGTGGGGAAACTCTCTTGAATCTCTTCTCGTGGCTTCTGGAACAATTTTAAATGAGATTCTTATTTGGAAAATTGTACCCCGAGCTCTGGAAAAATCCTTGTTATGCTCATATAAGAGCAACACTCTCGGTGTAGAGGACTATGAGAATATGCATATTAGTGATAAGCAATATATAACAATTCATCTTGGAAGGTTAAAGGAACATGAAGGTTCAATATTTAGAATAGCTTGGTCCTCTGATGGATCAAAGTTCATGTCTGTTTCCGATGACCGTAGTGCTCGCATCTGGATGTTGAGTTCTCAGTCACAGAACTTTGTCAATAAGGCAGATGGACAAAATGATGTTCAGATTATACCGAAACTCACACTTTTTGGGCATAGTGCTAGAATATGGGATTGCTATGTATCTAATTCTTTAGTTATTACAGTCGGCGAGGATTGTTCTTGTTGCATCTGGGCTATGGACGGAAAGCTAATCAAGAAGTTCAGGGAACACATCGGCCGAGGAATATGGCGGTGTTTATATGATCCAAGCACACTACTGCTTGCCACTGCTGGGTTTGATTCAGCCATCAAAGTGCACCATCTTTATAACTCATCTTGTCATGACAAAATGGAAGACAAGGTGGTCTCAGACGATGTCAATTATGATTCTGAGGTCTTTTCAATATCATCCCCTACAGTGTCAGGACAGTATGGGCCCATGGACAGCAAAAGTGAGTATGTACGATACCTACACTTTGTAAAAGAAAATGATCTCTATGTTGCCACAAACAATGGATATCTGCATCATGCTGAGCTCTCTAATTCCAACAATGTAAGATGGACCAAGGTTACTCAAGTTGCTGAGGTGGCACCGATTATTTGCATGGATGTTATGGTAATGCACTCAGATATTTCACTGAATAGGGATGATATCATTGCCCTTGGAGATGGACGTGGAAATGTTACTGTTGTCCATTTAACTGCCTGTGATCTTGGACCTAAAGTGAATTCATCTTTTACCTGGCCAGCAGAAAAAGATAGGCAGCTACTAGGAGTATACTGGTGCAAATCTCTTGAATGTAGACACATTTTCACAGCTGATCCTAGAGGTGTGCTTAAGTTATGGGACATAAGGAATGCCCTTTTTTCAAATACCCTTGATATCACTACATCTCAGAAGGTTCCTCTTATTGCTGTGTTTGAATCTTCCTTTGGGGCAAGAATCATGTGCTTAGATGCGTTTCCTCAGGACGAGGTCCTTGTAGCTGGTGATAAGAAGGGTAACATAACTGCCTTTCACTTCCCTAAAGTACTGGTAGAACATGAGAGCTGTGGGACGCAACAGAATATGCCTTCATGTGATCGTTTTAAAGGAGCTCATGGAATTTCTAGTGTCACAAGTGTTCGTATAATTACCTCAACTTCTGATCATCTTCAAATTCACACCACAGGGGGAGACGGTTGCATTTGCTTTTTCAAGTATGACAGAAATGTGCAAAAGATTGAATTTTTTGGAATGAGACAAGTAAAAGAGTTGGGCACCGTTCAATCCATCTTTCCTCCTCATGCCTCAGAAAAGCAATTGCTTAGCACCTATGCAATAGGTTTCACTTCTGCCGATTTTATCATTTGGGACCTTGAAAATGAAACAAAGCTGCTTCAAATATCCTGTGGAGGGTGGCGCCGTCCTTATTCATATTATCTTGGCATGGTCCCTGAGTATCAGAATTGTTTTGCCTTTGTTAAGGATCATAACATTCACATTCATAGGCACTGGGCACCATGTCAAGACAAGAAATTGCTTCCTCAAGTTTTCCATATGCAGTTCCATGGAAGAGAAGTGCACTCTTTGTGCTTCATAGATCCAGCAGGCTATTCAAATCCTGAGAAGAGCTCAAATCTGTATATTGCAACAGGATGTGAAGATGGAACCATGCGACTTACAGGGAACTCAATTAATAGTGCTGGAAAATGGTGTTCCTCCAAGCTGCTGGGGGAGCATGTTGGTGGACCAGCTGTGAGAGCGACATGCTTCGTGCAGAAGGGCTACACATCGTTAGATAAATCATGTAACATCATCCCCAATGGCAACTCTGATGACACTTTAGTCAAAAACAAGGATAACATTTCCTTATTAATATCCGTTGGATCAAAGCAAGTCCTGACTACTTGGGTTTTACAGCCTAAGGTTGCAGAAAATAGACATATCTGTTCTAGTGGCTTAGATGTAGACTCCAAGCAAAGCTTGAAAGGTGATTCAGCCATGACATTTCAATGGCTTTCTACCCACATGCCTCCAAAGCTTACCAATAGGTTGAAAACTGGCAATGTAAAAAATAATAATGAGGAAGGGGATTCCTCTATGATGCAACCCAACCAGTTTATTGTGGATCAGCTGGAAAATGACTGGCGTTATCTTTCGGTTACAGCATTTCTTTTGGAACATCCTTCCACCAATTCGACAGTGTGTTTTGTTGTTGCTGCTTGCTCTGACGCTACAGTCGTGCTCCGTGCTCTTCTTTTGCCTTCTAGGCTATGGTTTGATGTTGCCTTGTTGGCTCCACAGGGATCACCAGTTCTGGTGCTCAAGCATATTATTGCTGCAGCTAGTGTCAACTGCAAAGACACCGCAGACCATGGAGATACATACATTGTTGTGAGTGGATCTACAGATGGTAGCATTACTTTCTGGGACCTTACAGATACTATTCATGGATTTATGCAACTAGTATCAGAGACTCAACCACACATGGTTATTGATTGCCAAAAGCGGCCCAGAACAGGAAGAGGAAGTCAAGGCGGTCGGCGCAGGTGGAGAACACTGCCGGGCCGTTCTTTGAAAAAGATAAATAAAGAGACATCGATCCCTGATGGGAGCATCCCGAATACTCCAAATGCCACTGAAAATACATCTGAAACTTCTAATGTGGAAGAAACTGATGCCACAAACCAGAACTATGCATTCTCAAATTTGCAATCGTGTAATATACCTGAAGTGACACCAATGCACAGATTCTCCGGTGTTCACCAGTCAGGCGTCAACTGCCTCCATGTCTCAGAGATGAGGGCTTGCTCGTACTCGACACCTGGCATGTCTTACTGTGTCATAAGCGGTGGGGATGATCAAGCTGTTCACTGTTTCAGTTTTACATTAGGATCTCTTCAGGATTGCGCAATAAATACAAGCCTAGACTCACCTGACAATGGTGCAGTTAAAATTATTTGTCAACATAGGGTTCCTTCTGCCCACAGTTCAGCAGTTAAAGGCATCTGGACGGATGGCATATGGGCTTTCTCTACTGGCCTTGATCAAAGAGTAAGATGTTGGAAGATGGAGTCATCTGGCAAATTCACTGAGTATTCCCATGCTATCATCAGCGTACCTGAGCCAGAAACTTTGGATGTTGTACATGACCGTGCAGAGAGGAAATACTGGGTTGCTGTTGCTGGAAGGGGAATGCAAATGGTTGAGTTCTTGTCAGCAGAAAATGACGAGGAAGAAATATCAAAATGACTCTTTTTTTTAGATGAGATGTTAGTTCATTTGGTGTGAAACAGGATGCCCACCAGAGAACTGGAATTTTATGTGGACTTCTGCAACTTGATCAAAACTTTGAAATATGTCAGGCAGAACGTACACAGCATGCCGACCAGGTTGGTGCGGGTCTGCTTGAACAACCTCATCGCGCTGATCGAGCAGTGGATTGTGCGAAGTTTAAGCTGTAGTGCTGTACTGATTTCACTCATGGTGGACGGTGACAATGGCAAGTGGAACTGTCCGTCTGTCCGTCCAAGTTGATGAGAGCTTGTCACCTAGTGGATTTTCCTGGCTGGACGAGCAGTGGCGGCGTGTCATGACAACTAGGAAGTATGCAACTAATGACTAACGTGACATGTTTGTTGGTAGGAGTGATTCTGCAATCTCTAACCGACCATGAACCCATGATGTTAACTGGTGAAAGATGACCAGATTCAAGAGTGATTCTGTAGATTCTTGAACCAGCCATGAGGCCGTGATGTTAACTGGTGATAAGTGATCAGATTCAAAAACATTATTTTTAGTATTGTAAAGGGCTTTGAGCTTCATCTAAGGTCCCTTTCTTTCTTTTTGCTGATGCTGTGGCAAACGTTTCTCAATTGTGGTGGCAGATGCTGCACAAGATGGTGTGCTTTGCTTTGGTCCTTCCTGGTCCATTTATTCCGTCAGTCAGGCTTTCAGACTTCAGAAGTTCAGAGACTTCATTTAAACTGGTGTGCCTCTGTCTAGAATCCTATGTTGACTGGAGTTATATATCTGTCTTGACCGGTCAATGCCCAAATTTTGATTGGTGATGATAAAACTTAAAACAA] [+] EMBL D43384 [ AAATGCCACTGAAAATACATCTGAAACTTCTAATGTGGAAGAAACTGATGCCACAAACCAGAACTATGCATTCTCAAATTTGCAATCGTGTAATATACCTGAGGTGACACCANTGCACAGATTCTCCGGTGTTCACCAGTCAGGCGTCAACTGCCTCCATGTCTCAGAGATGAGGGCTTGCTCGTACTCGACACCTGGCATGTNTTACTGTGTCATAAGCGGTGGGGATGATCAAGCTGTTCACTGTTTCAGNTTTACATTAGGNTCTCTTCAGGATTGCGCAGTAANTACAAGCCTAGACTCACCTGACAATGG ] consensusID : consensus_6191#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 689 fasta sequence [GGGGGAACTCCAAAGTGGTTGCGTTCTTGTTCCCCCAAAGAAAGCGCGCGGGGGAGAAAGTTCCAGAAAGCCTTTTTTTTAAGTTGAGATGGTTAGGTTCCTTTGGGCGGTAACCAAGGATGCCCCCCAAGAAGACCGGGGATTGTTAATGGGGACTTTTGCAACTTGGATCAAAACTTTTAAATTATGTCCAAACAAAAACGTACCCAAGCATGCCCGACCTTTTGGGTTGGTCCGGGTTTTGCTTTAACAACCCTCATTGCCCTTGATCGAGCAGTGGATTGTGCGAAGTTTAAGCCGTAGGGCTGTACTGGTATCACTCATGGGTGGACGGTGACAATGGCAAGTGGAACTGTCCGTCTGTCCGTCCAAGTTGATGAGAGCTTGTCACCTAGTGGATTTTCCTGGCTGGACGAGCAGGGGCGGCGTGTCATGACAACTAGGAAGTATGCAACTAATGACTAACGTGACATGTTTGTTGGTAGGAGTGTTCTGCAATCTTTAACCAACCATGAACCCATGATGTTAACTGGTGAAAGATGACCAGATTCAAGAGTGATTCTGTAATCTTGATTCTTGAACCAGCCATGAGGCCGTGATGTTAACTGGTGAAAAGTGATCAGATTCAAAAACATTATTTTTAGTATTGTAAAGGGCTTTGAGCCTTTGAGCTTCAAAAAAAAAAAAAA] [-] EMBL CA763165 [GGGGGAACTCCAAAGTGGTTGCGTTCTTGTTCCCCCAAAGAAAGCGCGCGGGGGAGAAAGTTCCAGAAAGCCTTTTTTTTAAGTTGAGATGGTTAGGTTCCTTTGGGCGGTAACCAAGGATGCCCCCCAAGAAGACCGGGGATTGTTAATGGGGACTTTTGCAACTTGGATCAAAACTTTTAAATTATGTCCAAACAAAAACGTACCCAAGCATGCCCGACCTTTTGGGTTGGTCCGGGTTTTGCTTTAACAACCCTCATTGCCCTTGATCGAGCAGTGGATTGTGCGAAGTTTAAGCCGTAGGGCTGTACTGGTATCACTCATGGGTGGACGGTGACAATGGCAAGTGGAACTGTCCGTCTGTCCGTCCAAGTTGATGAGAGCTTGTCACCTAGTGGATTTTCCTGGCTGGACGAGCAGGGGCGGCGTGTCATGACAACTAGGAAGTATGCAACTAATGACTAACGTGACATGTTTGTTGGTAGGAGTGTTCTGCAATCTTTAACCAACCATGAACCCATGATGTTAACTGGTGAAAGATGACCAGATTCAAGAGTGATTCTGTAATCTTGATTCTTGAACCAGCCATGAGGCCGTGATGTTAACTGGTGAAAAGTGATCAGATTCAAAAACATTATTTTTAGTATTGTAAAGGGCTTTGAGCCTTTGAGCTTCAAAAAAAAAAAAAA] consensusID : consensus_6191#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 156 fasta sequence [GCCATGAGGCCGTGATGTTAACTGGTGATAAGTGATCAGATTCAAAAACATTATTTTTAGTATTGTAAAGGGCTTTGAGCTTCATCTAAGGTCCCTTTCTTTCTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU181812 [GCCATGAGGCCGTGATGTTAACTGGTGATAAGTGATCAGATTCAAAAACATTATTTTTAGTATTGTAAAGGGCTTTGAGCTTCATCTAAGGTCCCTTTCTTTCTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_6191#0 CATGGCCGCCGGCGACCACCTGCGGCCGGGCTCCTACCTCGGCGACGTCTCCGCGCTCTC 60 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 CTTCCTCCCCTCCTCCCCCCGCCCTCTTCTCCTCGCCGGCACCGGATCGGAGCTGCTCGT 120 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 CTACGACGTCGACGCCGCCAGGCTTGTCGCCTCCTTCCAAGTGTTCGACGGCGTCCGCGT 180 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 CCACGGCATCCAGCCCCGCTGCCCGGACGGCCCGTCTCCTGGCGATGTCACCGTGTTGGT 240 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 GTTCGGTGAGAGGAGGGTGAAGATTTTCAGGATTCGCGCCGACTTCGAGGATGGCGAAGC 300 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 GTGCGGCGTGCGGTTGGAGTTGGAGCAGAGGCTCCCCGGATTTGATCACTGGGTGCTGGA 360 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 CGCCTGCTTCCTGGAGGCTGATGGGCTGCTCGCGATCGGTTTGAGTGACAATTCAGTGGC 420 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 ATTATGGGATTTGAGCCAGCGTGTGTTGCATGCCCGAGTGAAATCGCCAGAGAAGTGCCT 480 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 ACTGTATTCGATGAGAATGTGGGGAAACTCTCTTGAATCTCTTCTCGTGGCTTCTGGAAC 540 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 AATTTTAAATGAGATTCTTATTTGGAAAATTGTACCCCGAGCTCTGGAAAAATCCTTGTT 600 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 ATGCTCATATAAGAGCAACACTCTCGGTGTAGAGGACTATGAGAATATGCATATTAGTGA 660 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TAAGCAATATATAACAATTCATCTTGGAAGGTTAAAGGAACATGAAGGTTCAATATTTAG 720 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 AATAGCTTGGTCCTCTGATGGATCAAAGTTCATGTCTGTTTCCGATGACCGTAGTGCTCG 780 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 CATCTGGATGTTGAGTTCTCAGTCACAGAACTTTGTCAATAAGGCAGATGGACAAAATGA 840 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TGTTCAGATTATACCGAAACTCACACTTTTTGGGCATAGTGCTAGAATATGGGATTGCTA 900 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TGTATCTAATTCTTTAGTTATTACAGTCGGCGAGGATTGTTCTTGTTGCATCTGGGCTAT 960 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 GGACGGAAAGCTAATCAAGAAGTTCAGGGAACACATCGGCCGAGGAATATGGCGGTGTTT 1020 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 ATATGATCCAAGCACACTACTGCTTGCCACTGCTGGGTTTGATTCAGCCATCAAAGTGCA 1080 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 CCATCTTTATAACTCATCTTGTCATGACAAAATGGAAGACAAGGTGGTCTCAGACGATGT 1140 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 CAATTATGATTCTGAGGTCTTTTCAATATCATCCCCTACAGTGTCAGGACAGTATGGGCC 1200 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 CATGGACAGCAAAAGTGAGTATGTACGATACCTACACTTTGTAAAAGAAAATGATCTCTA 1260 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TGTTGCCACAAACAATGGATATCTGCATCATGCTGAGCTCTCTAATTCCAACAATGTAAG 1320 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 ATGGACCAAGGTTACTCAAGTTGCTGAGGTGGCACCGATTATTTGCATGGATGTTATGGT 1380 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 AATGCACTCAGATATTTCACTGAATAGGGATGATATCATTGCCCTTGGAGATGGACGTGG 1440 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 AAATGTTACTGTTGTCCATTTAACTGCCTGTGATCTTGGACCTAAAGTGAATTCATCTTT 1500 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TACCTGGCCAGCAGAAAAAGATAGGCAGCTACTAGGAGTATACTGGTGCAAATCTCTTGA 1560 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 ATGTAGACACATTTTCACAGCTGATCCTAGAGGTGTGCTTAAGTTATGGGACATAAGGAA 1620 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TGCCCTTTTTTCAAATACCCTTGATATCACTACATCTCAGAAGGTTCCTCTTATTGCTGT 1680 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 GTTTGAATCTTCCTTTGGGGCAAGAATCATGTGCTTAGATGCGTTTCCTCAGGACGAGGT 1740 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 CCTTGTAGCTGGTGATAAGAAGGGTAACATAACTGCCTTTCACTTCCCTAAAGTACTGGT 1800 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 AGAACATGAGAGCTGTGGGACGCAACAGAATATGCCTTCATGTGATCGTTTTAAAGGAGC 1860 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TCATGGAATTTCTAGTGTCACAAGTGTTCGTATAATTACCTCAACTTCTGATCATCTTCA 1920 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 AATTCACACCACAGGGGGAGACGGTTGCATTTGCTTTTTCAAGTATGACAGAAATGTGCA 1980 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 AAAGATTGAATTTTTTGGAATGAGACAAGTAAAAGAGTTGGGCACCGTTCAATCCATCTT 2040 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TCCTCCTCATGCCTCAGAAAAGCAATTGCTTAGCACCTATGCAATAGGTTTCACTTCTGC 2100 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 CGATTTTATCATTTGGGACCTTGAAAATGAAACAAAGCTGCTTCAAATATCCTGTGGAGG 2160 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 GTGGCGCCGTCCTTATTCATATTATCTTGGCATGGTCCCTGAGTATCAGAATTGTTTTGC 2220 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 CTTTGTTAAGGATCATAACATTCACATTCATAGGCACTGGGCACCATGTCAAGACAAGAA 2280 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 ATTGCTTCCTCAAGTTTTCCATATGCAGTTCCATGGAAGAGAAGTGCACTCTTTGTGCTT 2340 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 CATAGATCCAGCAGGCTATTCAAATCCTGAGAAGAGCTCAAATCTGTATATTGCAACAGG 2400 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 ATGTGAAGATGGAACCATGCGACTTACAGGGAACTCAATTAATAGTGCTGGAAAATGGTG 2460 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TTCCTCCAAGCTGCTGGGGGAGCATGTTGGTGGACCAGCTGTGAGAGCGACATGCTTCGT 2520 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 GCAGAAGGGCTACACATCGTTAGATAAATCATGTAACATCATCCCCAATGGCAACTCTGA 2580 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TGACACTTTAGTCAAAAACAAGGATAACATTTCCTTATTAATATCCGTTGGATCAAAGCA 2640 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 AGTCCTGACTACTTGGGTTTTACAGCCTAAGGTTGCAGAAAATAGACATATCTGTTCTAG 2700 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TGGCTTAGATGTAGACTCCAAGCAAAGCTTGAAAGGTGATTCAGCCATGACATTTCAATG 2760 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 GCTTTCTACCCACATGCCTCCAAAGCTTACCAATAGGTTGAAAACTGGCAATGTAAAAAA 2820 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TAATAATGAGGAAGGGGATTCCTCTATGATGCAACCCAACCAGTTTATTGTGGATCAGCT 2880 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 GGAAAATGACTGGCGTTATCTTTCGGTTACAGCATTTCTTTTGGAACATCCTTCCACCAA 2940 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TTCGACAGTGTGTTTTGTTGTTGCTGCTTGCTCTGACGCTACAGTCGTGCTCCGTGCTCT 3000 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TCTTTTGCCTTCTAGGCTATGGTTTGATGTTGCCTTGTTGGCTCCACAGGGATCACCAGT 3060 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TCTGGTGCTCAAGCATATTATTGCTGCAGCTAGTGTCAACTGCAAAGACACCGCAGACCA 3120 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TGGAGATACATACATTGTTGTGAGTGGATCTACAGATGGTAGCATTACTTTCTGGGACCT 3180 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TACAGATACTATTCATGGATTTATGCAACTAGTATCAGAGACTCAACCACACATGGTTAT 3240 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TGATTGCCAAAAGCGGCCCAGAACAGGAAGAGGAAGTCAAGGCGGTCGGCGCAGGTGGAG 3300 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 AACACTGCCGGGCCGTTCTTTGAAAAAGATAAATAAAGAGACATCGATCCCTGATGGGAG 3360 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 CATCCCGAATACTCCAAATGCCACTGAAAATACATCTGAAACTTCTAATGTGGAAGAAAC 3420 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TGATGCCACAAACCAGAACTATGCATTCTCAAATTTGCAATCGTGTAATATACCTGAAGT 3480 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 GACACCAATGCACAGATTCTCCGGTGTTCACCAGTCAGGCGTCAACTGCCTCCATGTCTC 3540 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 AGAGATGAGGGCTTGCTCGTACTCGACACCTGGCATGTCTTACTGTGTCATAAGCGGTGG 3600 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 GGATGATCAAGCTGTTCACTGTTTCAGTTTTACATTAGGATCTCTTCAGGATTGCGCAAT 3660 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 AAATACAAGCCTAGACTCACCTGACAATGGTGCAGTTAAAATTATTTGTCAACATAGGGT 3720 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TCCTTCTGCCCACAGTTCAGCAGTTAAAGGCATCTGGACGGATGGCATATGGGCTTTCTC 3780 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TACTGGCCTTGATCAAAGAGTAAGATGTTGGAAGATGGAGTCATCTGGCAAATTCACTGA 3840 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 GTATTCCCATGCTATCATCAGCGTACCTGAGCCAGAAACTTTGGATGTTGTACATGACCG 3900 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TGCAGAGAGGAAATACTGGGTTGCTGTTGCTGGAAGGGGAATGCAAA-TGGTTGAGTTCT 3959 consensus_6191#1 ---------------------------------GGGGGAACTCCAAAGTGGTTGCGTTCT 27 consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TGTCAGC----AGAAAATG-ACGAGGAAGAAATATCAAAATGACTCTTTTTTTTAGATGA 4014 consensus_6191#1 TGTTCCCCCAAAGAAAGCGCGCGGGGGAGAAAGTTCCAGAAAGCCTTTTTTTTAAGTTGA 87 consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 GATGTT--AGTTCATTTGGTGTGAAAC--AGGATGCCCACCAG--AGAACTGGAATTTT- 4067 consensus_6191#1 GATGGTTAGGTTCCTTTGGGCGGTAACCAAGGATGCCCCCCAAGAAGACCGGGGATTGTT 147 consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 -ATGTGGACTTCTGCAACTTG-ATCAAAACTTTGAAAT-ATGTC--AGGCAGAACGTACA 4122 consensus_6191#1 AATGGGGACTTTTGCAACTTGGATCAAAACTTTTAAATTATGTCCAAACAAAAACGTACC 207 consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 CA-GCATGCC-GACC----AGGTTGGTGCGGGTCT-GCTTGAACAACC-TCATCGCGCT- 4173 consensus_6191#1 CAAGCATGCCCGACCTTTTGGGTTGGTCCGGGTTTTGCTTTAACAACCCTCATTGCCCTT 267 consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 GATCGAGCAGTGGATTGTGCGAAGTTTAAGCTGTAGTGCTGTACTGATTTCACTCATGG- 4232 consensus_6191#1 GATCGAGCAGTGGATTGTGCGAAGTTTAAGCCGTAGGGCTGTACTGGTATCACTCATGGG 327 consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TGGACGGTGACAATGGCAAGTGGAACTGTCCGTCTGTCCGTCCAAGTTGATGAGAGCTTG 4292 consensus_6191#1 TGGACGGTGACAATGGCAAGTGGAACTGTCCGTCTGTCCGTCCAAGTTGATGAGAGCTTG 387 consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TCACCTAGTGGATTTTCCTGGCTGGACGAGCAGTGGCGGCGTGTCATGACAACTAGGAAG 4352 consensus_6191#1 TCACCTAGTGGATTTTCCTGGCTGGACGAGCAGGGGCGGCGTGTCATGACAACTAGGAAG 447 consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 TATGCAACTAATGACTAACGTGACATGTTTGTTGGTAGGAGTGATTCTGCAATCTCTAAC 4412 consensus_6191#1 TATGCAACTAATGACTAACGTGACATGTTTGTTGGTAGGAGTG-TTCTGCAATCTTTAAC 506 consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 CGACCATGAACCCATGATGTTAACTGGTGAAAGATGACCAGATTCAAGAGTGATTCTGTA 4472 consensus_6191#1 CAACCATGAACCCATGATGTTAACTGGTGAAAGATGACCAGATTCAAGAGTGATTCTGTA 566 consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 -----GATTCTTGAACCAGCCATGAGGCCGTGATGTTAACTGGTGATAAGTGATCAGATT 4527 consensus_6191#1 ATCTTGATTCTTGAACCAGCCATGAGGCCGTGATGTTAACTGGTGAAAAGTGATCAGATT 626 consensus_6191#2 ------------------GCCATGAGGCCGTGATGTTAACTGGTGATAAGTGATCAGATT 42 **************************** ************* consensus_6191#0 CAAAAACATTATTTTTAGTATTGTAAAGGGCTTTGAGCTTCATCTAAGGTCCCTTTCTTT 4587 consensus_6191#1 CAAAAACATTATTTTTAGTATTGTAAAGGGCTTTGAGCCTT---TGAGCTTCAAAAAAAA 683 consensus_6191#2 CAAAAACATTATTTTTAGTATTGTAAAGGGCTTTGAGCTTCATCTAAGGTCCCTTTCTTT 102 ************************************** * * ** * * consensus_6191#0 CTTTTTGCTGATGCTGTGGCAAACGTTTCTCAATTGTGGTGGCAGATGCTGCACAAGATG 4647 consensus_6191#1 AAAAAA------------------------------------------------------ 689 consensus_6191#2 CTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------ 156 consensus_6191#0 GTGTGCTTTGCTTTGGTCCTTCCTGGTCCATTTATTCCGTCAGTCAGGCTTTCAGACTTC 4707 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 AGAAGTTCAGAGACTTCATTTAAACTGGTGTGCCTCTGTCTAGAATCCTATGTTGACTGG 4767 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 AGTTATATATCTGTCTTGACCGGTCAATGCCCAAATTTTGATTGGTGATGATAAAACTTA 4827 consensus_6191#1 ------------------------------------------------------------ consensus_6191#2 ------------------------------------------------------------ consensus_6191#0 AAACAA 4833 consensus_6191#1 ------ consensus_6191#2 ------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||