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Oryza sativa
cluster # 6200 cluster # 6200       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6200#0 length = 2971 sequences # 3  
consensus_6200#1 length = 770 sequences # 1  

consensusID : consensus_6200#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2971
fasta sequence
                              [AAAAGAAAACTAACAAAATCGTGTGCAAAAACTCGAAACAAACAGGCCGGCGGCCCCATGATTGCAGCCAGCAAGGAACCTTTGAACTCACACTATCGAGCAACGACACCTCAGATCCCCTCTTGTCCTCCTCCCCAAACGGCACCAACCGGTCGGTTCACTTCACTAGCGCAAAGTAGTTCATTTCAACCCACCCACCAAAAACCAAAAAAACCATTTCAATTTTCAAATTTCCTCCTCCTCCTCCTCAAACCCCCACCACCCAGCCCAGCCATCCCCAAACCCTAAATCCGCCGCCCGCCGCCGCCCTCGCCGTTGCGCCATTCCGGCTGCGATGGGGTTCGTGGATCCGGCGGCGCCGCTGCTGGCCACGTGCGGCGGCGACACCGTCAAGCTGTTCGACGTCACGGTCGAGTCCGGCGACCCCTGCGTCCTCGCCTACACCCCCGCGCCGGCACACCCCGTCAACGCCGTCCGCTGGAACCACACCAATCTAATTGTAGCAAGTGCTGGGGATGATAAAAAGATCTCATTATGGCACAAAAAAGGTCAAAATGTAGGACAGCTACCAACATCAACTGTTGATCGTGGGGATGACATAGAGGAGTGCATATATTCTATCAGTTTTAGCAACAAGGGTTCACGATATCTTTGCTCTGGTGGGAGTGGCCACATCGTTAGGATATGCGATTGGCAGCGGAAGAGGTGCATCAAATGGTTAAGGTGGTCACACTGACACCATTACGGGTGTGATGTATAATTGCAAAGATGAACATTTGGCTTCAATCAGCATGAAGGGGGATCTTATTCTCCATAATCTTGCTTCTGGAGCACGTGCTGCTGAACTTAGTGACCCAAATGGGCAGGTTTTGAGAGTCCTTGACTATTCACGTAATAGTAGGCATATATTGGTGACAGCAGGAGATGATGGTTCTGTGCATCTCTGGGATACAACTGCAAGAACTCCAAAGGTCTCATGGCTGAAGCAACATTCTGCACCCATAAGTGGTGTCTGTATTTCGCCCTCCAGTGATAAGATAATTGCTACAGTTGGCCTGGACAAGAAGTTGTACACACTCGATTCAGGGTCAAGACGACCAACACACACTATTCCTCACGAGGCCCCTTTCTCATCATTGGCATACAATGATGATGGTACAATATTGGCTGCAGGCACAAATAGTGGTCGTGTGGTATTTTATGATGTTCGAGGAAAACCTCAGCCATTGACTATTCTTCGTGCATACAATAGCTCAGAGGCTGTGACAGGTTTATGTTGGCAAAGGTCAAAGCCTGTCATTGTTAACGAGAATAGTTCTTCTGAGGTTGCTCTTCTGGGTGGGAGTAGTGAAGAATCTGTTCTCATGCCAGATCCCTTGCCTTCAGCAACTTCAGCTTTTCATTCTGGAGGTGTCATCCCAAATCTTCGGTCTTCTTTGGCTGCAAACCCAAGTGGATTTCTTTCTACCTCTACCTCGTCCACTGTGGAGGAAACTCCATACAGGACACGGCCATTGTCTGGTGGACCATTATCAAAGCTACAGGCTCCTCGTAGTAACTTCAGTCTAAAGGATGATATGGATGTATTCTCTCCACTTGTAGATGTTCAACCTTTCACACCGTCCAGTGGCAGCCTGTGGGATGACCATGGGAGTGATGAAACAAAAAAGGATGATAAACTTGGAGAGAAGAAATTGTCGACAACTAGAAAATTCCCGTTTATTGAAGACAATAATGAGCCACATCCAATCTCAGACTGGAAGTCAATTTCCAATTCAAGACAGGATGATGCCTCATCAGCAACCACTACATCCATGCCATCATGGAAGAGTGAACTATCTATCACTTCACCTGAGACAGCAACTGGAAATGCATTATCCGATAGGTTAACTCACCGCCAACAAGTCTCGCGCTTTGGGGCTTCAGCCTTTCAGACTGGCAGCTTTGCATTTGCAGGCTTACAAGATTCAGCTCCAACAACTGGTAACTCACTGAAAGGTTCTCTAACAAGTACATACGTTAATGAACCTACAACACAAGGGTGCCTTGAGCAATGCACGCCCTTCCCTGGACATATCAACTTCTAGCCTCCAGAGTTCACTGTCCTCAGGCTTAATGGCCAAGACTATGCCACCAGTAAACTCCGACCAGCCTGGAGCAGCACAATCTAGTTCTCAATGGAGACCCTCAACATATACTGATAGAGTGAGCACATCGTCTGTTTTCAGTGAAGGATTAGCATCAGCCTTTGGTTCACCAAAATCAAAGAAGACTGGGGCAGAAACAAAAGATGAACTGCTCAGCAGTCTTCTATCAAGACAAGAAGCAGCAGCTGCCTCTTCATCTGCCAACCTTGTAGCAAACAATGGGGTGGTGCCACCACAATTGCCAACATCAGGTTTGTCAGCTGATCAACAGGGAGCTTCATCCTTCTCACTTCAGTATGTGCAGCGGATGCTTGAAGAATCCCTAGGGTCTGTTCAGAAGTCCATCCATGAGGACGTGAGAAATCTGCACATCGAACTTCTAAGACAGTTTCACATGCAAGAGATGGAAATGTCGGGCGTGTTGAACCTGGTCTTAGAGAAGTTGGAAGGCCTTACAAAGGAAGTGCAGCAGCTAAGAAGGGAGAACCAACAGCTCCGGCAGCAGCTCCTCTAATCTGTATATTCTTTTAGGGGTTAGTTTTGACATTGCTGTGCTTCGCTGGAGCGTACAATGGCTACAATCCCCGACTGATATTTGATTATCTGTTTGTCTAGTTGGGTTGGCGAATAGGAAATCCATGTTTGACACGGTTGTACATAGCATCCCTATTCAGTCTAGGAGCATATTGATTAATTTGACCTGTTTGATACTTTGATCAGATTGTTTTATTCCTTTTTTCCCTTTTTGTTGTGCCATGTTTGGACATTGGATGCAGTCTTGTTCGTGTCTGCCTGGCCTATGTGGAATGCTAACAAAGAGGTTT]

[+] EMBL AK121740             [AAAAGAAAACTAACAAAATCGTGTGCAAAAACTCGAAACAAACAGGCCGGCGGCCCCATGATTGCAGCCAGCAAGGAACCTTTGAACTCACACTATCGAGCAACGACACCTCAGATCCCCTCTTGTCCTCCTCCCCAAACGGCACCAACCGGTCGGTTCACTTCACTAGCGCAAAGTAGTTCATTTCAACCCACCCACCAAAAACCAAAAAAACCATTTCAATTTTCAAATTTCCTCCTCCTCCTCCTCAAACCCCCACCACCCAGCCCAGCCATCCCCAAACCCTAAATCCGCCGCCCGCCGCCGCCCTCGCCGTTGCGCCATTCCGGCTGCGATGGGGTTCGTGGATCCGGCGGCGCCGCTGCTGGCCACGTGCGGCGGCGACACCGTCAAGCTGTTCGACGTCACGGTCGAGTCCGGCGACCCCTGCGTCCTCGCCTACACCCCCGCGCCGGCACACCCCGTCAACGCCGTCCGCTGGAACCACACCAATCTAATTGTAGCAAGTGCTGGGGATGATAAAAAGATCTCATTATGGCACAAAAAAGGTCAAAATGTAGGACAGCTACCAACATCAACTGTTGATCGTGGGGATGACATAGAGGAGTGCATATATTCTATCAGTTTTAGCAACAAGGGTTCACGATATCTTTGCTCTGGTGGGAGTGGCCACATCGTTAGGATATGCGATTGGCAGCGGAAGAGGTGCATCAAATGGTTAAGGTGGTCACACTGACACCATTACGGGTGTGATGTATAATTGCAAAGATGAACATTTGGCTTCAATCAGCATGAAGGGGGATCTTATTCTCCATAATCTTGCTTCTGGAGCACGTGCTGCTGAACTTAGTGACCCAAATGGGCAGGTTTTGAGAGTCCTTGACTATTCACGTAATAGTAGGCATATATTGGTGACAGCAGGAGATGATGGTTCTGTGCATCTCTGGGATACAACTGCAAGAACTCCAAAGGTCTCATGGCTGAAGCAACATTCTGCACCCATAAGTGGTGTCTGTATTTCGCCCTCCAGTGATAAGATAATTGCTACAGTTGGCCTGGACAAGAAGTTGTACACACTCGATTCAGGGTCAAGACGACCAACACACACTATTCCTCACGAGGCCCCTTTCTCATCATTGGCATACAATGATGATGGTACAATATTGGCTGCAGGCACAAATAGTGGTCGTGTGGTATTTTATGATGTTCGAGGAAAACCTCAGCCATTGACTATTCTTCGTGCATACAATAGCTCAGAGGCTGTGACAGGTTTATGTTGGCAAAGGTCAAAGCCTGTCATTGTTAACGAGAATAGTTCTTCTGAGGTTGCTCTTCTGGGTGGGAGTAGTGAAGAATCTGTTCTCATGCCAGATCCCTTGCCTTCAGCAACTTCAGCTTTTCATTCTGGAGGTGTCATCCCAAATCTTCGGTCTTCTTTGGCTGCAAACCCAAGTGGATTTCTTTCTACCTCTACCTCGTCCACTGTGGAGGAAACTCCATACAGGACACGGCCATTGTCTGGTGGACCATTATCAAAGCTACAGGCTCCTCGTAGTAACTTCAGTCTAAAGGATGATATGGATGTATTCTCTCCACTTGTAGATGTTCAACCTTTCACACCGTCCAGTGGCAGCCTGTGGGATGACCATGGGAGTGATGAAACAAAAAAGGATGATAAACTTGGAGAGAAGAAATTGTCGACAACTAGAAAATTCCCGTTTATTGAAGACAATAATGAGCCACATCCAATCTCAGACTGGAAGTCAATTTCCAATTCAAGACAGGATGATGCCTCATCAGCAACCACTACATCCATGCCATCATGGAAGAGTGAACTATCTATCACTTCACCTGAGACAGCAACTGGAAATGCATTATCCGATAGGTTAACTCACCGCCAACAAGTCTCGCGCTTTGGGGCTTCAGCCTTTCAGACTGGCAGCTTTGCATTTGCAGGCTTACAAGATTCAGCTCCAACAACTGGTAACTCACTGAAAGGTTCTCTAACAAGTACATACGTTAATGAACCTACAACACAAGGGTGCCTTGAGCAATGCACGCCCTTCCCTGGACATATCAACTTCTAGCCTCCAGAGTTCACTGTCCTCAGGCTTAATGGCCAAGACTATGCCACCAGTAAACTCCGACCAGCCTGGAGCAGCACAATCTAGTTCTCAATGGAGACCCTCAACATATACTGATAGAGTGAGCACATCGTCTGTTTTCAGTGAAGGATTAGCATCAGCCTTTGGTTCACCAAAATCAAAGAAGACTGGGGCAGAAACAAAAGATGAACTGCTCAGCAGTCTTCTATCAAGACAAGAAGCAGCAGCTGCCTCTTCATCTGCCAACCTTGTAGCAAACAATGGGGTGGTGCCACCACAATTGCCAACATCAGGTTTGTCAGCTGATCAACAGGGAGCTTCATCCTTCTCACTTCAGTATGTGCAGCGGATGCTTGAAGAATCCCTAGGGTCTGTTCAGAAGTCCATCCATGAGGACGTGAGAAATCTGCACATCGAACTTCTAAGACAGTTTCACATGCAAGAGATGGAAATGTCGGGCGTGTTGAACCTGGTCTTAGAGAAGTTGGAAGGCCTTACAAAGGAAGTGCAGCAGCTAAGAAGGGAGAACCAACAGCTCCGGCAGCAGCTCCTCTAATCTGTATATTCTTTTAGGGGTTAGTTTTGACATTGCTGTGCTTCGCTGGAGCGTACAATGGCTACAATCCCCGACTGATATTTGATTATCTGTTTGTCTAGTTGGGTTGGCGAATAGGAAATCCATGTTTGACACGGTTGTACATAGCATCCCTATTCAGTCTAGGAGCATATTGATTAATTTGACCTGTTTGATACTTTGATCAGATTGTTTTATTCCTTTTTTCCCTTTTTGTTGTGCCATGTTTGGACATTGGATGCAGTCTTGTTCGTGTCTGCCTGGCCTATGTGGAATGCTAACAAAGAGGTTT]
[+] EMBL CA998836             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATGATAAACTTGGAGAGAAGAAATTGTCGACAACTAGAAAATTCCCGTTTATTGAAGACAATAATGAGCCACATCCAATCTCAGACTGGAAGTCAATTTCCAATTCAAGACAGGATGATGCCTCATCAGCAACCACTACATCCATGCCATCATGGAAGAGTGAACTATCTATCACTTCACCTGAGACAGCAACTGGAAATGCATTATCCGATAGGTTAACTCACCGCCAACAAGTCTCGCGCTTTGGGGCTTCAGCCTTTCAGACTGGCAGCTTTGCATTTGCAGGCTTACAAGATTCAGCTCCAACAACTGGTAACTCACTGAAAGGTTCTCTAACAAGTA ATATTTTAATGAACCTACAAAACAAGGGTGTCTTGAGCAATGCACGCCCTTCCCTGGACATATCAACTTCTAGCCTCCAGAGTTCACTGTCCTCAGGCTTAATGGCCAAGACTATGCCACCAGTAAACTCCGACCAGCCTGGAGCAGCACAATCTAGTTCTCAATGGAGACCCTCAACATATACTGATAGAGTGAGCACATCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA762348             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TAGTTCTCAATGGAGACCCTCAACATATACTGATAGAGTGAGCACATCGTCTGTTTTCAGTGAAGGATTAGCATCAGCCTTTGGTTCACCAAAATCAAAGAAGACTGGGGCAGAAACAAAAGATGAACTGCTCAGCAGTCTTCTATCAAGACAAGAAGCAGCAGCTGCCTCTTCATCTGCCAACCTTGTAGCAAACAATGGGGTGGTGCCACCACAATTGCCAACATCAGGTTTGTCAGCTGATCAACAGGGAGCTTCATCCTTCTCACTTCAGTATGTGCAGCGGATGCTTGAAGAATCCCTAGGGTCTGTTCAGAAGTCCATCCATGAGGACGTGAGAAATCTGCACATCGAACTTCTAAGACAGTTTCACATGCAAGAGATGGAAATGTCGGGCGTGTTGAGCCTGGTCTTAGAGAAGTTGGAAGGCCTTACAAAGGAAGTGCAGCAGCTAAGAAGGGAGAACCAGCAGCTCCGGCAGCAGCTCCTCTAATCTGTATATTCTTTTAGGGGTTAGTTTTGACATTGCTGTGCTTCGCTGGAGCGTACAATGGCTACAATCCCCGACTGATATTTGATTATCTGTTTGTCTAGTTGGGTTGGCGAATAGGAAATCCATGTTTGACACGGTTGTACATAGCATCCCTATTCAGTCTAGGAGCATATTGATTAATTTGACCTGTTTGATACTTTGATCAGATTGTTTTATT CTTTTTTCaaaaaa                                                                              ]


>consensus_6200#0 AAAAGAAAACTAACAAAATCGTGTGCAAAAACTCGAAACAAACAGGCCGGCGGCCCCATG ATTGCAGCCAGCAAGGAACCTTTGAACTCACACTATCGAGCAACGACACCTCAGATCCCC TCTTGTCCTCCTCCCCAAACGGCACCAACCGGTCGGTTCACTTCACTAGCGCAAAGTAGT TCATTTCAACCCACCCACCAAAAACCAAAAAAACCATTTCAATTTTCAAATTTCCTCCTC CTCCTCCTCAAACCCCCACCACCCAGCCCAGCCATCCCCAAACCCTAAATCCGCCGCCCG CCGCCGCCCTCGCCGTTGCGCCATTCCGGCTGCGATGGGGTTCGTGGATCCGGCGGCGCC GCTGCTGGCCACGTGCGGCGGCGACACCGTCAAGCTGTTCGACGTCACGGTCGAGTCCGG CGACCCCTGCGTCCTCGCCTACACCCCCGCGCCGGCACACCCCGTCAACGCCGTCCGCTG GAACCACACCAATCTAATTGTAGCAAGTGCTGGGGATGATAAAAAGATCTCATTATGGCA CAAAAAAGGTCAAAATGTAGGACAGCTACCAACATCAACTGTTGATCGTGGGGATGACAT AGAGGAGTGCATATATTCTATCAGTTTTAGCAACAAGGGTTCACGATATCTTTGCTCTGG TGGGAGTGGCCACATCGTTAGGATATGCGATTGGCAGCGGAAGAGGTGCATCAAATGGTT AAGGTGGTCACACTGACACCATTACGGGTGTGATGTATAATTGCAAAGATGAACATTTGG CTTCAATCAGCATGAAGGGGGATCTTATTCTCCATAATCTTGCTTCTGGAGCACGTGCTG CTGAACTTAGTGACCCAAATGGGCAGGTTTTGAGAGTCCTTGACTATTCACGTAATAGTA GGCATATATTGGTGACAGCAGGAGATGATGGTTCTGTGCATCTCTGGGATACAACTGCAA GAACTCCAAAGGTCTCATGGCTGAAGCAACATTCTGCACCCATAAGTGGTGTCTGTATTT CGCCCTCCAGTGATAAGATAATTGCTACAGTTGGCCTGGACAAGAAGTTGTACACACTCG ATTCAGGGTCAAGACGACCAACACACACTATTCCTCACGAGGCCCCTTTCTCATCATTGG CATACAATGATGATGGTACAATATTGGCTGCAGGCACAAATAGTGGTCGTGTGGTATTTT ATGATGTTCGAGGAAAACCTCAGCCATTGACTATTCTTCGTGCATACAATAGCTCAGAGG CTGTGACAGGTTTATGTTGGCAAAGGTCAAAGCCTGTCATTGTTAACGAGAATAGTTCTT CTGAGGTTGCTCTTCTGGGTGGGAGTAGTGAAGAATCTGTTCTCATGCCAGATCCCTTGC CTTCAGCAACTTCAGCTTTTCATTCTGGAGGTGTCATCCCAAATCTTCGGTCTTCTTTGG CTGCAAACCCAAGTGGATTTCTTTCTACCTCTACCTCGTCCACTGTGGAGGAAACTCCAT ACAGGACACGGCCATTGTCTGGTGGACCATTATCAAAGCTACAGGCTCCTCGTAGTAACT TCAGTCTAAAGGATGATATGGATGTATTCTCTCCACTTGTAGATGTTCAACCTTTCACAC CGTCCAGTGGCAGCCTGTGGGATGACCATGGGAGTGATGAAACAAAAAAGGATGATAAAC TTGGAGAGAAGAAATTGTCGACAACTAGAAAATTCCCGTTTATTGAAGACAATAATGAGC CACATCCAATCTCAGACTGGAAGTCAATTTCCAATTCAAGACAGGATGATGCCTCATCAG CAACCACTACATCCATGCCATCATGGAAGAGTGAACTATCTATCACTTCACCTGAGACAG CAACTGGAAATGCATTATCCGATAGGTTAACTCACCGCCAACAAGTCTCGCGCTTTGGGG CTTCAGCCTTTCAGACTGGCAGCTTTGCATTTGCAGGCTTACAAGATTCAGCTCCAACAA CTGGTAACTCACTGAAAGGTTCTCTAACAAGTACATACGTTAATGAACCTACAACACAAG GGTGCCTTGAGCAATGCACGCCCTTCCCTGGACATATCAACTTCTAGCCTCCAGAGTTCA CTGTCCTCAGGCTTAATGGCCAAGACTATGCCACCAGTAAACTCCGACCAGCCTGGAGCA GCACAATCTAGTTCTCAATGGAGACCCTCAACATATACTGATAGAGTGAGCACATCGTCT GTTTTCAGTGAAGGATTAGCATCAGCCTTTGGTTCACCAAAATCAAAGAAGACTGGGGCA GAAACAAAAGATGAACTGCTCAGCAGTCTTCTATCAAGACAAGAAGCAGCAGCTGCCTCT TCATCTGCCAACCTTGTAGCAAACAATGGGGTGGTGCCACCACAATTGCCAACATCAGGT TTGTCAGCTGATCAACAGGGAGCTTCATCCTTCTCACTTCAGTATGTGCAGCGGATGCTT GAAGAATCCCTAGGGTCTGTTCAGAAGTCCATCCATGAGGACGTGAGAAATCTGCACATC GAACTTCTAAGACAGTTTCACATGCAAGAGATGGAAATGTCGGGCGTGTTGAACCTGGTC TTAGAGAAGTTGGAAGGCCTTACAAAGGAAGTGCAGCAGCTAAGAAGGGAGAACCAACAG CTCCGGCAGCAGCTCCTCTAATCTGTATATTCTTTTAGGGGTTAGTTTTGACATTGCTGT GCTTCGCTGGAGCGTACAATGGCTACAATCCCCGACTGATATTTGATTATCTGTTTGTCT AGTTGGGTTGGCGAATAGGAAATCCATGTTTGACACGGTTGTACATAGCATCCCTATTCA GTCTAGGAGCATATTGATTAATTTGACCTGTTTGATACTTTGATCAGATTGTTTTATTCC TTTTTTCCCTTTTTGTTGTGCCATGTTTGGACATTGGATGCAGTCTTGTTCGTGTCTGCC TGGCCTATGTGGAATGCTAACAAAGAGGTTT



consensusID : consensus_6200#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 770
fasta sequence
                              [TTTCAAATTTCCTCCTCCTCCTCCTCAAACCCCCACCACCCAGCCCAGCCATCCCCAAACCCTAAATCCGCCGCCCGCCGCCGCCCTCGCCGTTGCGCCATTCCGGCTGCGATGGGGTTCGTGGATCCGGCGGCGCCGCTGCTGGCCACGTGCGGCGGCGACACCGTCAAGCTGTTCGACGTCACGGTCGAGTCCGGCGACCCCTGCGTCCTCGCCTACACCCCCGCGCCGGCACACCCCGTCAACGCCGTCCGCTGGAACCACACCAGTGAGTACCCCCAGCCTCGCCTCGCCGGCTCCACCGCGTGCCCGCTCGTCCCGCCTCCGGCTCTCCTTTCCCCTCCCCCCTCCCCTTCCCAGATCTCCCGAGTTGGGTTTACTTTTGGCGTCGTTCGCGCGAGGATCTCTCGGTGGGCAGCCGGAGCCTCCCGGCCATGGGGATCCGTACTGTCCGGGCGATTCGAGCTGAGGGTGTCCGCGCTCCCCTGTCTAATTGAGCGATGCCCCTGCCGCGTTGTTATGAGATAGTGGCACGAGAGGATTTATTTCCAGCATTGTGATCTACTGGGTATTGTGGAGTGGGCTTGGCGCGGATAGACTGCAGGCTGAGAGTGTTGAACTGTCCCAGTGGCTCGTCATTCTTCCCGAGCTCTGAAATTCTGCATTGCATCTTCAGTTAGATACCGCGCTTATGTTTTCTGATCCTACAATGTAGAGCCAGAATTTAACTATTTGTATGTAGCGATACACAGAATGCAATCAATCGAGAT]

[+] EMBL AK073706             [TTTCAAATTTCCTCCTCCTCCTCCTCAAACCCCCACCACCCAGCCCAGCCATCCCCAAACCCTAAATCCGCCGCCCGCCGCCGCCCTCGCCGTTGCGCCATTCCGGCTGCGATGGGGTTCGTGGATCCGGCGGCGCCGCTGCTGGCCACGTGCGGCGGCGACACCGTCAAGCTGTTCGACGTCACGGTCGAGTCCGGCGACCCCTGCGTCCTCGCCTACACCCCCGCGCCGGCACACCCCGTCAACGCCGTCCGCTGGAACCACACCAGTGAGTACCCCCAGCCTCGCCTCGCCGGCTCCACCGCGTGCCCGCTCGTCCCGCCTCCGGCTCTCCTTTCCCCTCCCCCCTCCCCTTCCCAGATCTCCCGAGTTGGGTTTACTTTTGGCGTCGTTCGCGCGAGGATCTCTCGGTGGGCAGCCGGAGCCTCCCGGCCATGGGGATCCGTACTGTCCGGGCGATTCGAGCTGAGGGTGTCCGCGCTCCCCTGTCTAATTGAGCGATGCCCCTGCCGCGTTGTTATGAGATAGTGGCACGAGAGGATTTATTTCCAGCATTGTGATCTACTGGGTATTGTGGAGTGGGCTTGGCGCGGATAGACTGCAGGCTGAGAGTGTTGAACTGTCCCAGTGGCTCGTCATTCTTCCCGAGCTCTGAAATTCTGCATTGCATCTTCAGTTAGATACCGCGCTTATGTTTTCTGATCCTACAATGTAGAGCCAGAATTTAACTATTTGTATGTAGCGATACACAGAATGCAATCAATCGAGAT]


>consensus_6200#1 TTTCAAATTTCCTCCTCCTCCTCCTCAAACCCCCACCACCCAGCCCAGCCATCCCCAAAC CCTAAATCCGCCGCCCGCCGCCGCCCTCGCCGTTGCGCCATTCCGGCTGCGATGGGGTTC GTGGATCCGGCGGCGCCGCTGCTGGCCACGTGCGGCGGCGACACCGTCAAGCTGTTCGAC GTCACGGTCGAGTCCGGCGACCCCTGCGTCCTCGCCTACACCCCCGCGCCGGCACACCCC GTCAACGCCGTCCGCTGGAACCACACCAGTGAGTACCCCCAGCCTCGCCTCGCCGGCTCC ACCGCGTGCCCGCTCGTCCCGCCTCCGGCTCTCCTTTCCCCTCCCCCCTCCCCTTCCCAG ATCTCCCGAGTTGGGTTTACTTTTGGCGTCGTTCGCGCGAGGATCTCTCGGTGGGCAGCC GGAGCCTCCCGGCCATGGGGATCCGTACTGTCCGGGCGATTCGAGCTGAGGGTGTCCGCG CTCCCCTGTCTAATTGAGCGATGCCCCTGCCGCGTTGTTATGAGATAGTGGCACGAGAGG ATTTATTTCCAGCATTGTGATCTACTGGGTATTGTGGAGTGGGCTTGGCGCGGATAGACT GCAGGCTGAGAGTGTTGAACTGTCCCAGTGGCTCGTCATTCTTCCCGAGCTCTGAAATTC TGCATTGCATCTTCAGTTAGATACCGCGCTTATGTTTTCTGATCCTACAATGTAGAGCCA GAATTTAACTATTTGTATGTAGCGATACACAGAATGCAATCAATCGAGAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6200#0      AAAAGAAAACTAACAAAATCGTGTGCAAAAACTCGAAACAAACAGGCCGGCGGCCCCATG 60
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      ATTGCAGCCAGCAAGGAACCTTTGAACTCACACTATCGAGCAACGACACCTCAGATCCCC 120
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      TCTTGTCCTCCTCCCCAAACGGCACCAACCGGTCGGTTCACTTCACTAGCGCAAAGTAGT 180
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      TCATTTCAACCCACCCACCAAAAACCAAAAAAACCATTTCAATTTTCAAATTTCCTCCTC 240
consensus_6200#1      -------------------------------------------TTTCAAATTTCCTCCTC 17
                                                                 *****************

consensus_6200#0      CTCCTCCTCAAACCCCCACCACCCAGCCCAGCCATCCCCAAACCCTAAATCCGCCGCCCG 300
consensus_6200#1      CTCCTCCTCAAACCCCCACCACCCAGCCCAGCCATCCCCAAACCCTAAATCCGCCGCCCG 77
                      ************************************************************

consensus_6200#0      CCGCCGCCCTCGCCGTTGCGCCATTCCGGCTGCGATGGGGTTCGTGGATCCGGCGGCGCC 360
consensus_6200#1      CCGCCGCCCTCGCCGTTGCGCCATTCCGGCTGCGATGGGGTTCGTGGATCCGGCGGCGCC 137
                      ************************************************************

consensus_6200#0      GCTGCTGGCCACGTGCGGCGGCGACACCGTCAAGCTGTTCGACGTCACGGTCGAGTCCGG 420
consensus_6200#1      GCTGCTGGCCACGTGCGGCGGCGACACCGTCAAGCTGTTCGACGTCACGGTCGAGTCCGG 197
                      ************************************************************

consensus_6200#0      CGACCCCTGCGTCCTCGCCTACACCCCCGCGCCGGCACACCCCGTCAACGCCGTCCGCTG 480
consensus_6200#1      CGACCCCTGCGTCCTCGCCTACACCCCCGCGCCGGCACACCCCGTCAACGCCGTCCGCTG 257
                      ************************************************************

consensus_6200#0      GAACCACACCAATCTAATTGTAGCAAGTGCTGGGGATGATAAAAAGATCTCATTATGGCA 540
consensus_6200#1      GAACCACACCAG--TGAGTACCCCCAGC-CTCGCCTCGCCGGCTCCACCGCGTGCCCGCT 314
                      ***********   * * *    * **  ** *    *        * * * *    ** 

consensus_6200#0      CAAAAAAGGTCAAAATGTAGGACAGCTACCAACATCAACTGTTGATCGTGGGGATGACAT 600
consensus_6200#1      C------GTCCCGCCTCCGGCTCTCCTTTCCCCTCCCCCCTCCCCTTCCCAGATCTCCCG 368
                      *      *  *    *   *  *  **  *  *  *  *      *     *     *  

consensus_6200#0      AGAGGAGTGCATATATTCTATCAGTTTTAGCAACAAGGGTTCACGATATCTTTGCTCTGG 660
consensus_6200#1      AGTTGGGTTTAC---TTTTGGCGTCGTTCGCGCGAGGATCTCTCGGTGGGC-------AG 418
                      **  * **  *    ** *  *    ** **   * *   ** ** *            *

consensus_6200#0      TGGGAGTGGCCACATCGTTAGGATATGCGATTGGCAGCGGAAGAGGTGCATCAAATGGTT 720
consensus_6200#1      CCGGAGCCTCCCGGCCATGGGGATCCGT-ACTGTCCG-------GGCGATTCGAGCTG-- 468
                        ****   **    * *  ****  *  * ** * *       ** *  ** *   *  

consensus_6200#0      AAGGTGGTCACACTGACACCATTACGGGTGTGATGTATAATTGCAAAGATGAACATTTGG 780
consensus_6200#1      AGGGTGTCCGCGCTCCCCTGTCTAATTGAGCGATGCCC--CTGCCGCG--------TTGT 518
                      * ****  * * **  *     **   * * ****      ***   *        *** 

consensus_6200#0      CTTCAATCAGCATGAAGGGGGATCTTATTCTCCATAATCTTGCTTCTGGAGCACGTGCTG 840
consensus_6200#1      TATGAGATAGTGGCACGAGAGGATTTATTTCCAGCATTGTGATCTACTGGGTATTGTGGA 578
                        * *   **    * * * *   *****  *   * * *    *   * * *       

consensus_6200#0      CTGAACTTAGTGACCCAAATGGGCAGGTTTTGAGAGTCCTTGACTATTCACGTAATAGTA 900
consensus_6200#1      GTGGGCTTGGCGCGGATAGACTGCAGGCT--GAGAGTGTTGAACTGTCCCAGTGGC--TC 634
                       **  *** * *     *    ***** *  ******  *  *** * *  **     * 

consensus_6200#0      GGCATATATTGGTGACAGCAGGAGATGATGGTTCTGTGCATCTCTGGGATACAACTGCAA 960
consensus_6200#1      GTCAT-TCTTCCCGAGCTCTGAAATTCTGCATTGCAT-CTTCAGTTAGATACCGCGCTTA 692
                      * *** * **   **   * * *  *     **   * * **  *  *****  *    *

consensus_6200#0      GAACTCCAAAGGTCTCATGGCTGAAGCAACATTCTGC-ACCCATAAGTGGTG-TCTGTAT 1018
consensus_6200#1      TGTTTTCTGATCCTACAATGTAGAGCCAGAATTTAACTATTTGTATGTAGCGATACACAG 752
                          * *  *     **  *  **  **  ***   * *    ** ** * * *    * 

consensus_6200#0      TTCGCCCTCCAGTGATAAGATAATTGCTACAGTTGGCCTGGACAAGAAGTTGTACACACT 1078
consensus_6200#1      AATGCAATCAATCGAGAT------------------------------------------ 770
                         **  ** *  ** *                                           

consensus_6200#0      CGATTCAGGGTCAAGACGACCAACACACACTATTCCTCACGAGGCCCCTTTCTCATCATT 1138
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      GGCATACAATGATGATGGTACAATATTGGCTGCAGGCACAAATAGTGGTCGTGTGGTATT 1198
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      TTATGATGTTCGAGGAAAACCTCAGCCATTGACTATTCTTCGTGCATACAATAGCTCAGA 1258
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      GGCTGTGACAGGTTTATGTTGGCAAAGGTCAAAGCCTGTCATTGTTAACGAGAATAGTTC 1318
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      TTCTGAGGTTGCTCTTCTGGGTGGGAGTAGTGAAGAATCTGTTCTCATGCCAGATCCCTT 1378
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      GCCTTCAGCAACTTCAGCTTTTCATTCTGGAGGTGTCATCCCAAATCTTCGGTCTTCTTT 1438
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      GGCTGCAAACCCAAGTGGATTTCTTTCTACCTCTACCTCGTCCACTGTGGAGGAAACTCC 1498
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      ATACAGGACACGGCCATTGTCTGGTGGACCATTATCAAAGCTACAGGCTCCTCGTAGTAA 1558
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      CTTCAGTCTAAAGGATGATATGGATGTATTCTCTCCACTTGTAGATGTTCAACCTTTCAC 1618
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      ACCGTCCAGTGGCAGCCTGTGGGATGACCATGGGAGTGATGAAACAAAAAAGGATGATAA 1678
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      ACTTGGAGAGAAGAAATTGTCGACAACTAGAAAATTCCCGTTTATTGAAGACAATAATGA 1738
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      GCCACATCCAATCTCAGACTGGAAGTCAATTTCCAATTCAAGACAGGATGATGCCTCATC 1798
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      AGCAACCACTACATCCATGCCATCATGGAAGAGTGAACTATCTATCACTTCACCTGAGAC 1858
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      AGCAACTGGAAATGCATTATCCGATAGGTTAACTCACCGCCAACAAGTCTCGCGCTTTGG 1918
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      GGCTTCAGCCTTTCAGACTGGCAGCTTTGCATTTGCAGGCTTACAAGATTCAGCTCCAAC 1978
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      AACTGGTAACTCACTGAAAGGTTCTCTAACAAGTACATACGTTAATGAACCTACAACACA 2038
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      AGGGTGCCTTGAGCAATGCACGCCCTTCCCTGGACATATCAACTTCTAGCCTCCAGAGTT 2098
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      CACTGTCCTCAGGCTTAATGGCCAAGACTATGCCACCAGTAAACTCCGACCAGCCTGGAG 2158
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      CAGCACAATCTAGTTCTCAATGGAGACCCTCAACATATACTGATAGAGTGAGCACATCGT 2218
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      CTGTTTTCAGTGAAGGATTAGCATCAGCCTTTGGTTCACCAAAATCAAAGAAGACTGGGG 2278
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      CAGAAACAAAAGATGAACTGCTCAGCAGTCTTCTATCAAGACAAGAAGCAGCAGCTGCCT 2338
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      CTTCATCTGCCAACCTTGTAGCAAACAATGGGGTGGTGCCACCACAATTGCCAACATCAG 2398
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      GTTTGTCAGCTGATCAACAGGGAGCTTCATCCTTCTCACTTCAGTATGTGCAGCGGATGC 2458
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      TTGAAGAATCCCTAGGGTCTGTTCAGAAGTCCATCCATGAGGACGTGAGAAATCTGCACA 2518
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      TCGAACTTCTAAGACAGTTTCACATGCAAGAGATGGAAATGTCGGGCGTGTTGAACCTGG 2578
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      TCTTAGAGAAGTTGGAAGGCCTTACAAAGGAAGTGCAGCAGCTAAGAAGGGAGAACCAAC 2638
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      AGCTCCGGCAGCAGCTCCTCTAATCTGTATATTCTTTTAGGGGTTAGTTTTGACATTGCT 2698
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      GTGCTTCGCTGGAGCGTACAATGGCTACAATCCCCGACTGATATTTGATTATCTGTTTGT 2758
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      CTAGTTGGGTTGGCGAATAGGAAATCCATGTTTGACACGGTTGTACATAGCATCCCTATT 2818
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      CAGTCTAGGAGCATATTGATTAATTTGACCTGTTTGATACTTTGATCAGATTGTTTTATT 2878
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      CCTTTTTTCCCTTTTTGTTGTGCCATGTTTGGACATTGGATGCAGTCTTGTTCGTGTCTG 2938
consensus_6200#1      ------------------------------------------------------------
                                                                                  

consensus_6200#0      CCTGGCCTATGTGGAATGCTAACAAAGAGGTTT 2971
consensus_6200#1      ---------------------------------
                                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)