These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6201#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2246 fasta sequence [CTCAGGATCTGCTCCGGGGAGATCAGCGGCGAGGACGGGGCCCATTCCGTCAACTTCGCCGAAGCTGCACTACTACTGCAGGGATCAGTCCAGGTTTACAGCCGCAAGGTGGAGTATTTGTACACCTTGGTGCTCAACGCGCTGGAATTTCTCTCGCAAAAGAAGCAAGATCAGGAAAATAGCTCAGCTCAAGCTAATGAAAGTGATCGTAGCACAGTACCGAATGAGGAAGATGATGTGTTTTCAGGGCTAGATGATGTCCCAGTGGAAGCAAGGACCACTTTGGATAACAATATTGATCGAGATGACTTGCTAAAAAAAAAATGTGAGGCCACCAGCAAATCTGCTGGTGTTTGAAGGAGACTGTATGGATAGCGAAGCGAGTGAGCTAGAATTATATTTGTTAGCAACATGTGGCTTTTTCGGAGATTTCCTCCTGTTGGATCCATGTGATGCACCAGCTGTTTCTGACTTTTTGCAAGGAAAACAATCTGCCAAAGAAGATATATTCGCTGGCAGGGGCAGCTCTGCACGGTCTAAAAGCCGAACCAATGTTTTCTGTTCCCCAAATGGAAGATCTGGGGGCACCGGTCGTAGACCTACCCCTGGAAAAGTCCAAGAGGGAAATCCAGATCAAACTCAGGAGAGCAATCCCGACCAATCTCAAGAAATGAATGCAAATCAAACCCAAGAACATATCGATGACTTAAATGTAAATGATGATCATTGGTCTGTTCACCCTGCTGACCATGATTTTCCTGATAATGACATGCCCCACCCAGATGATGCAGACGCTGGGTGTGTGGATGATTCTGATGATGATGATGATCCATGGAGGCCATTGAATCCCCATGAACCTGGCAACCTAAAGATCAGGACTTGTAGGAAAGTAAAAAGTTTTGCAAGGCAGGTCATTGGTGCTCCCAAAAGGAACATTATTGCATCTCTGTTTCCTATGGAAAAGATGGATGGTGCATCCTTTAAAGTACATCTATCTCAGCAGGAAACACATCATGTTCCTGAACCTCCTCCTCTGTACGAAAAGCTTATGAGGTCACTTGAACATGGAGAACCAGAAAGTCACCTGTTTGGAGATTTGAAGGATGGCCATGAGCCGGATATTGGTGTAAATGACTTTGATATTCATGAGCCAGATATGCCAGATGATGTCTGTGATATGGATGTTGATATGGACATACCAACATACCCTGATAAGAATAATGATGCAACATTGGATGGAGCTCAAGGTACACAGGATAGCATGGATGCGCATGAAAGCCTTGAAGATTTGTGTCGGTCACATCTGGATGCTCTCCTTGCTAGCATAGCTGAGGCTGAACAGCAGACTGAGCTGGATGCACGAGTTTCGACATGGAAAGAACGAATTGAGCATGCCTTGGAAGAGCAGGATAGAAACCCACCTTTTGATATTGGTTCTTATGGAGAGCAAATCATCGACACGCTCTCATCAAGAACCGAGAATGCAGGGATTGCATCATTCAGTGAGATTGTTAGTGGCAAGCCAAAGTATGAGGTTGCAAGGACATTCTCTGCGCTTCTCCAGCTGGTGAACGGTAGAAGTGTTGATCTGGACAAAGGACAAACTACGAATGGGTTGGTATGTCACACGGCTTCCAA-CCCATTCCATGTAAGGCTCATTGGTCCCAACCAGAGACCGG-AAATCGAGGCACGTTT--CGCGCGAAAGAG-GGTCAATTCGCCTTCACGAAATAAAGG-CAGTGGCGAACCCTCTCCAGCGCAACAGAAGT-CGCCTAAGAAACATGGGCA-TAAAAATGGCAAGGTT-CCAGTG--AAGA-CGTCAATTAAA-CTGACTCCAGATGGAAAGCGAAGGCGGAGGTCAACTCAAATGCTGCGCCCGATCAATCTAGAATACAGCTGATGAAGATGGAGGGCAGACTGACTCATGAGCATAACAATTATGATTCTCTTCTTCCTGTAACTTGAGTGTTGTCTAGCAACTATGAGTTATGACATAGGCCTAGCTAGATGGGGTGTACATGTACAATAGATCGTTGTATTGTGCTTGCCTGTATGTAATGTTATCTAGGTCTGTTGCTAGAATTGCCCTTATATGTCATGTCTGTAAGGGGGACATAGGCAAATACAGCTGATAGATTTCTTTCGTTCTACTTCAATAACCAAACTACCATCTGGTTAGCCTATTGTTTTGTACATGAGATATTCCTGTGCCTTTTGAGTTTTGAAAAAAAAAACAGAAAAAAAAAAAAAAA] [+] EMBL AK121812 [CTCAGGATCTGCTCCGGGGAGATCAGCGGCGAGGACGGGGCCCATTCCGTCAACTTCGCCGAAGCTGCACTACTACTGCAGGGATCAGTCCAGGTTTACAGCCGCAAGGTGGAGTATTTGTACACCTTGGTGCTCAACGCGCTGGAATTTCTCTCGCAAAAGAAGCAAGATCAGGAAAATAGCTCAGCTCAAGCTAATGAAAGTGATCGTAGCACAGTACCGAATGAGGAAGATGATGTGTTTTCAGGGCTAGATGATGTCCCAGTGGAAGCAAGGACCACTTTGGATAACAATATTGATCGAGATGACTTGCTAAAAAAAAAATGTGAGGCCACCAGCAAATCTGCTGGTGTTTGAAGGAGACTGTATGGATAGCGAAGCGAGTGAGCTAGAATTATATTTGTTAGCAACATGTGGCTTTTTCGGAGATTTCCTCCTGTTGGATCCATGTGATGCACCAGCTGTTTCTGACTTTTTGCAAGGAAAACAATCTGCCAAAGAAGATATATTCGCTGGCAGGGGCAGCTCTGCACGGTCTAAAAGCCGAACCAATGTTTTCTGTTCCCCAAATGGAAGATCTGGGGGCACCGGTCGTAGACCTACCCCTGGAAAAGTCCAAGAGGGAAATCCAGATCAAACTCAGGAGAGCAATCCCGACCAATCTCAAGAAATGAATGCAAATCAAACCCAAGAACATATCGATGACTTAAATGTAAATGATGATCATTGGTCTGTTCACCCTGCTGACCATGATTTTCCTGATAATGACATGCCCCACCCAGATGATGCAGACGCTGGGTGTGTGGATGATTCTGATGATGATGATGATCCATGGAGGCCATTGAATCCCCATGAACCTGGCAACCTAAAGATCAGGACTTGTAGGAAAGTAAAAAGTTTTGCAAGGCAGGTCATTGGTGCTCCCAAAAGGAACATTATTGCATCTCTGTTTCCTATGGAAAAGATGGATGGTGCATCCTTTAAAGTACATCTATCTCAGCAGGAAACACATCATGTTCCTGAACCTCCTCCTCTGTACGAAAAGCTTATGAGGTCACTTGAACATGGAGAACCAGAAAGTCACCTGTTTGGAGATTTGAAGGATGGCCATGAGCCGGATATTGGTGTAAATGACTTTGATATTCATGAGCCAGATATGCCAGATGATGTCTGTGATATGGATGTTGATATGGACATACCAACATACCCTGATAAGAATAATGATGCAACATTGGATGGAGCTCAAGGTACACAGGATAGCATGGATGCGCATGAAAGCCTTGAAGATTTGTGTCGGTCACATCTGGATGCTCTCCTTGCTAGCATAGCTGAGGCTGAACAGCAGACTGAGCTGGATGCACGAGTTTCGACATGGAAAGAACGAATTGAGCATGCCTTGGAAGAGCAGGATAGAAACCCACCTTTTGATATTGGTTCTTATGGAGAGCAAATCATCGACACGCTCTCATCAAGAACCGAGAATGCAGGGATTGCATCATTCAGTGAGATTGTTAGTGGCAAGCCAAAGTATGAGGTTGCAAGGACATTCTCTGCGCTTCTCCAGCTGGTGAACGGTAGAAGTGTTGATCTGGACAAAGGACAAACTACGAATGGGTTGGTATGTCACACGGCTTCCAA CCCATTCCATGTAAGGCTCATTGGTCCCAACCAGAGACCGG AAATCGAGGCACGTTT CGCGCGAAAGAG GGTCAATTCGCCTTCACGAAATAAAGG CAGTGGCAAACCCTCTCCAGCGCAACAGAAGT CGCCTAAGAAACATGGGCA TAAAAATGGCAAGGTT CCAGTG AAGA CGTCAATTAAA CTGACTCCAGATGGAAAGCGAAGGCGGAGGTCAACTCAAATGCTGCGCCCGATCAATCTAGAATACAGCTGATGAAGATGGAGGGCAGACTGACTCATGAGCATAACAATTATGATTCTCTTCTTCCTGTAACTTGAGTGTTGTCTAGCAACTATGAGTTATGACATAGGCCTAGCTAGATGGGGTGTACATGTACAATAGATCGTTGTATTGTGCTTGCCTGTATGTAATGTTATCTAGGTCTGTTGCTAGAATTGCCCTTATATGTCATGTCTGTAAGGGGGACATAGGCAAATACAGCTGATAGATTTCTTTCGTTCTACTTCAATAACCAAACTACCATC ] [+] EMBL CF323408 [ AGCCGAACCAATGTTTTCTGTTCCCCAAATGGAAGATCTGGGGGCACCGGTCGTAGACCTACCCCTGGAAAAGTCCAAGAGGGAAATCCAGATCAAACTCAGGAGAGCAATCCCGACCAATCTCAAGAAATGAATGCAAATCAAACCCAAGAACATATCGATGACTTAAATGTAAATGATGATCATTGGTCTGTTCACCCTGCTGACCATGATTTTCCTGATAATGACATGCCCCACCCAGATGATGCAGACGCTGGGTGTGTGGATGATTCTGATGATGATGATGATCCATGGAGGCCATTGAATCCCCATGAACCTGGCAACCTAAAGATCAGGACTTGTAGGAAAGTAAAAAGTTTTGCAAGGCAGGTCATTGGTGCTCCCAAAAGGAACATTATTGCATCTCTGTTTCCTATGGAAAAGATGGATGGTGCATCCTTTAAAGTACATCTATCTCAGCAGGAAACACATCATGTTCCTGAACCTCCTCCTCTGTACGAAAAGCTTATGAGGTCACTTGAACATGGAGAACCAGAAAGTCACCTGTTTGGAGATTTGAAGGATGGCCATGAGCCGGATATTGGTGTAAATGACTTTGATA ] [+] EMBL CA764966 [ aggggGTCTGTGATATGGATGTTGATATGGACATACCAACATACCCTGATAAGAATAATGATGCAACATTGGATGGAGCTCAAGGTACACAGGATAGCATGGATGCGCATGAAAGCCTTGAAGATTTGTGTCGGTCACATCTGGATGCTCTCCTTGCTAGCATAGCTGAGGCTGAACAGCAGACTGAGCTGGATGCACGAGTTTCGACATGGAAGGAACGAATTGAGCACGCCTTGGAAGAGCAGGATAGAAACCCACCTTTTGATATTGGTTCTTATGGAGAGCAAATCATCGGCACGCTCTCATCAAGAACCGAGAATGCAGGGATTGCATCATTCAGTGAGATTGTTAGTGGCAAGCCAAAGTATGAGGTTGCAAGGACATTCTCTGCGCTTCTCCAGCTGGTGAACGGTAGAAGTGTTGATCTGGACAAAGGACAAACTACGAATGGGTTGGTATGTCACACGGCTTCCAA CCCATTCCATGTAAGGCTCATTGGTCCCAACCAGAGACCGGAAAATCGAGGCACGTTTTCCGCGCGAAAGAGNNNCCAATTCGCCTTCACGAAATAAAGGCCAGTGGCGAACCCTCTCCAGCGCAACAGAAGTCCCCCTAANAAANATGGGCATTAAAAATGGNAAGGTTCCCAGCGGAAAGACCGCCANTTAAACCTGAacttcc ] [-] EMBL CA761997 [ ccAACTACGAATGGGTTGGTATGTCACACGGCTTTCAACCCCATTCCATGTAAGGCTCATTGGTCCCAACCAGAGACCGG AAATCGAGGCACGTTT CGCGCGAAAGAG GGTCAATTCGCCTTCACGAAATAAAGG CAGTGGCGAACCCTCTCCAGCGCAACAGAAGT CGCCTAAGAAACATGGGCA TAAAAATGGCAAGGTT CCAGTG AAGA CGTCAATTAAA CTGACTCCAGATGGAAAGCGAAGGCGGAGGCCAACTCAAATGCTGCGCCCGATCAATCTAGAATCCAGCTGATGAAGATGGAGGGCAGACTGACTCATGAGCATAACAATTATGATTCTCTTCTTCCTGTAACTTGAGTGTTGTCTAGCAACTATGAGTTATGACATAGGCCTAGCTAGATGGGGTGTACATGTACAATAGATCGTTGTATTGTGCTTGCCTGTATGTAATGTTATCTAGGTCTGTTGCTAGAATTGCCCTTATATGTCATGTCTGTAAGGGGGACATAGGCAAATACAGCTGATAGATTTCTTTCGTTCTACTTCAATAACCAAACTACCATCTGGTTAGCCTATTGTTTTGTACATGAGATATTCCTGTGCCTTTTGAGTTTTGAAAAAAAAAACAGAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||