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Oryza sativa
cluster # 6204 cluster # 6204       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6204#0 length = 2841 sequences # 2  
consensus_6204#1 length = 637 sequences # 1  
consensus_6204#2 length = 167 sequences # 1  

consensusID : consensus_6204#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2841
fasta sequence
                              [ATATATCGATATGTATGATGATGATGAAGAAGATGATGGTATCGAATCAAACTAATTAAACCGGACAGTTGTTGTTGATGATGATATACGATCGAGCAGGAGCAGCTGAGGATTAGTACAGAATCCATATATTGGTAGCTACGAGCCTACGACCTCGCTGCCTCGTATCGTGAAATGAGATACTAGCTAGAAAGGTGGTGGTAGGGGATAGATCCGGGGCGGGCGGCATGAGCATGAATAATATGATGGGTAGTCCACCAAGTCGTAGCAGGGGCAGGGATGAGAAGAAGAAGAGGTGGAAGTGGAAGCTTGGGCCGGCCACCATCCTGGGGTTCGAGCTGCTGGAGAGCATCGCCTTCTCCGGCGTGGCGCTGAACCTGGTGGTGTACCTGGCCACCGTCCTTCACGGCACCCTCGCCTTCAACGCCGCCCATGTCGACACCTGGAATGGCACCACCTTCATCGTCCCCGTCATCGGGGGCTTTCCTCGCCGACTCCTACTGGGGAAAGTACAGGACCATCCTCGCCTCCCTCCTCTTCTACCTCGCCGGCCTTGTGCTCCTCACCGTCTCCGCCGCTGTCCCCTCCCTGCGCCCGGCGCCGTGCACCGGCGTCCCATGCTCACCGGCCACCGGGACCCAGTTCTCCGTCTTCTTCCTCGCGCTCTACCTCACCTCCATCGGAACAGGCGGCGTCAAGTCTGCGCTGCTCCCCTTCGGGGCAGAGCAGTACGAGCGCGACGACCACGACACTGATCAGGAGGGCGCCCCGGCCCCGGAGAAGACGAAGCAATCCTTCTTCAGCTGGTTCTTCGGCGCCATCAACCTCGGCATCTTCGTGGCCGGGACGCTTGTATCGTGGGTGGAGCAGAACGTGTCGTGGGCGCTGGGCTTCGGCATCGCCACGCTCTGCCTGCTCATCGCGTCGGCGGCGTTCCTGGCAGCCACGCCCTGCTACAGGGTGCGCCTCCCCACGGGGGACACCCCCATCAAGGCCATCCTCAGGGTGCTGGTGGCCGCCTTCAGGAACAGGACCCGGACGCTGCCTCCCGACGCCGACGGCGATGGCCTGTACGAAGTCGACGACGACAAGAACAAGAACGGCGGCGATGATGAGAAGCTGGCGCACACCGAGGGGTTACGGTGGCTGGACAAGGCCGCCGTGAGGGTGGACGGGGGCGGCGTGTGGGAGGTGTGCACGGTGAGCGAGGTGGAGCGCGTGAAGGTGCTGGCGCGGATAGTGCCCATCTGGGTGACGTGCGTGCTGTACGCGGCGTCGCTGGGGCAGATGACCACCACCTTCATCCAGCAGGGGATGGCCATGGACACGAGGGTGTTCGGGGGGAGGTTCCGGGTGCCGGTGGCGTCGCTGGTGTCGGTGGAGGTGGTGTTCATGCTGCTGTGGGTGCTGCTCCACGACGTGGTGGTGATGCCGGTGGCGAGGAGGTGGTGGCGCTCGGGTGGTCTGACGCAGCTGCAGCGGATGGGCGTGGGGCGTGTGCTGGTGGTGGTGGCCATGGCGACGGCTGCTCTGGTGGAGAGGCGGAGGCTGCGAGGGGAGAAGCGGTCGATGAGCATCTTGTGGCAGGTGCCACAGTTCGTGGTGCTGGCTGGATCCGACGTGTTCAGCGGCATCGCGCAGCTGGAGTTCTTCTACGGCGAGGCGCCCGGGTCCATGCGCAGCATCTGCTCCGCTTTCTCCTTCCTCGCCCTCTCCCTCGGCTTCTACGTCAACTCGCTCGTCGTCACCATCGTGGCGGCGGTCACCAAGAGGAGCGACGGCTCCGGCGGCTGGCTGGCGCCGGACCTGGACACGGCCCACCTCGACTACTACTTCTGGCTCTGGGCCCTCATCAGCCTCGCCAACCTCGCCCTCTACCTGCTGCTCGCCGCCCGCTACAAGTCCAAGAAGCCCTCGCCACCGCATTCTTCTTCTCATCCCTAGCCACTACCACTATCATCTCCTTCTTCTTCCTCCACCATTAATTGTTCATCCATCATCATCATAGACATACCATATATACGCACGCATATCTCATCTCATCTGTAAGATGGATCATACATAGTCTGCAGCAGTGCATCTTGTATCTTTCTACCTATAGCCTATAGTTTGCTTCTGAATTTAACATCGGAATCCAGGGAATTGAACTGACGACAAACTTTTCTGCATACGATCGAATTGGTAGCTTTTGGGCAGAAACAGCCGTTTTTTTGACAAATTGACCCTTTTCAAAAACTTATTTCGAAACTAACCCCTGCTAAAAACTTCAACTAAAACTAGGCCGTCGGCTCAGCGCCAAGCGCATTGGCGCTGAGGTTGGCCGTGTCAGCGCCAACGGGACTGGCGCTGACATTGTGCCACCGTGGCGGCCGGGCCGATCCCCCAGCTGACGTGGCAGCTACCTCAGCGCCAACCGCTTCGGCGCTGAGGTGCCCAACATCAGCGCCAAGTACGTTGGCGCTGATCTTGGCTACTTTGAGCCCGGCCGAGGCCGCCCCAGCCAGTTAGTCCTCTGTTTTTCCCCAGCCGCCCGCCTAGGGTTCGGTCGCCACCGCGTTCTCCTCGCCCAATCTCCCCCAAAAACCTCTCTAATCGAAGGTGATTTGTGTGGCATTGAGTTTGGGATCGGAAGAGAAGGTAAACCCCTCTATAAACCCTAAGTTCCCCAAAGTTTTATTGGATATTTTGTATTGTTTTGGTTGTAGACGTGGTTTGATAATAGTTGGCTAAGGATGGATTATTAGATGGATAATGTGGGTGGGGATGAAGTGTGGAGGTGGCATATCTTTATCCATTTGGTTGTTGTTGATACATTTGACAAAATATATTTGGGATGAATGT]

[+] EMBL AK121847             [ATATATCGATATGTATGATGATGATGAAGAAGATGATGGTATCGAATCAAACTAATTAAACCGGACAGTTGTTGTTGATGATGATATACGATCGAGCAGGAGCAGCTGAGGATTAGTACAGAATCCATATATTGGTAGCTACGAGCCTACGACCTCGCTGCCTCGTATCGTGAAATGAGATACTAGCTAGAAAGGTGGTGGTAGGGGATAGATCCGGGGCGGGCGGCATGAGCATGAATAATATGATGGGTAGTCCACCAAGTCGTAGCAGGGGCAGGGATGAGAAGAAGAAGAGGTGGAAGTGGAAGCTTGGGCCGGCCACCATCCTGGGGTTCGAGCTGCTGGAGAGCATCGCCTTCTCCGGCGTGGCGCTGAACCTGGTGGTGTACCTGGCCACCGTCCTTCACGGCACCCTCGCCTTCAACGCCGCCCATGTCGACACCTGGAATGGCACCACCTTCATCGTCCCCGTCATCGGGGGCTTTCCTCGCCGACTCCTACTGGGGAAAGTACAGGACCATCCTCGCCTCCCTCCTCTTCTACCTCGCCGGCCTTGTGCTCCTCACCGTCTCCGCCGCTGTCCCCTCCCTGCGCCCGGCGCCGTGCACCGGCGTCCCATGCTCACCGGCCACCGGGACCCAGTTCTCCGTCTTCTTCCTCGCGCTCTACCTCACCTCCATCGGAACAGGCGGCGTCAAGTCTGCGCTGCTCCCCTTCGGGGCAGAGCAGTACGAGCGCGACGACCACGACACTGATCAGGAGGGCGCCCCGGCCCCGGAGAAGACGAAGCAATCCTTCTTCAGCTGGTTCTTCGGCGCCATCAACCTCGGCATCTTCGTGGCCGGGACGCTTGTATCGTGGGTGGAGCAGAACGTGTCGTGGGCGCTGGGCTTCGGCATCGCCACGCTCTGCCTGCTCATCGCGTCGGCGGCGTTCCTGGCAGCCACGCCCTGCTACAGGGTGCGCCTCCCCACGGGGGACACCCCCATCAAGGCCATCCTCAGGGTGCTGGTGGCCGCCTTCAGGAACAGGACCCGGACGCTGCCTCCCGACGCCGACGGCGATGGCCTGTACGAAGTCGACGACGACAAGAACAAGAACGGCGGCGATGATGAGAAGCTGGCGCACACCGAGGGGTTACGGTGGCTGGACAAGGCCGCCGTGAGGGTGGACGGGGGCGGCGTGTGGGAGGTGTGCACGGTGAGCGAGGTGGAGCGCGTGAAGGTGCTGGCGCGGATAGTGCCCATCTGGGTGACGTGCGTGCTGTACGCGGCGTCGCTGGGGCAGATGACCACCACCTTCATCCAGCAGGGGATGGCCATGGACACGAGGGTGTTCGGGGGGAGGTTCCGGGTGCCGGTGGCGTCGCTGGTGTCGGTGGAGGTGGTGTTCATGCTGCTGTGGGTGCTGCTCCACGACGTGGTGGTGATGCCGGTGGCGAGGAGGTGGTGGCGCTCGGGTGGTCTGACGCAGCTGCAGCGGATGGGCGTGGGGCGTGTGCTGGTGGTGGTGGCCATGGCGACGGCTGCTCTGGTGGAGAGGCGGAGGCTGCGAGGGGAGAAGCGGTCGATGAGCATCTTGTGGCAGGTGCCACAGTTCGTGGTGCTGGCTGGATCCGACGTGTTCAGCGGCATCGCGCAGCTGGAGTTCTTCTACGGCGAGGCGCCCGGGTCCATGCGCAGCATCTGCTCCGCTTTCTCCTTCCTCGCCCTCTCCCTCGGCTTCTACGTCAACTCGCTCGTCGTCACCATCGTGGCGGCGGTCACCAAGAGGAGCGACGGCTCCGGCGGCTGGCTGGCGCCGGACCTGGACACGGCCCACCTCGACTACTACTTCTGGCTCTGGGCCCTCATCAGCCTCGCCAACCTCGCCCTCTACCTGCTGCTCGCCGCCCGCTACAAGTCCAAGAAGCCCTCGCCACCGCATTCTTCTTCTCATCCCTAGCCACTACCACTATCATCTCCTTCTTCTTCCTCCACCATTAATTGTTCATCCATCATCATCATAGACATACCATATATACGCACGCATATCTCATCTCATCTGTAAGATGGATCATACATAGTCTGCAGCAGTGCATCTTGTATCTTTCTACCTATAGCCTATAGTTTGCTTCTGAATTTAACATCGGAATCCAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK066937             [                                                                                                                                                                    GTATCGTGAAATGAGATACTAGCTAGAAAGGTGGTGGTAGGGGATAGATCCGGGGCGGGCGGCATGAGCATGAATAATATGATGGGTAGTCCACCAAGTCGTAGCAGGGGCAGGGATGAGAAGAAGAAGAGGTGGAAGTGGAAGCTTGGGCCGGCCACCATCCTGGGGTTCGAGCTGCTGGAGAGCATCGCCTTCTCCGGCGTGGCGCTGAACCTGGTGGTGTACCTGGCCACCGTCCTTCACGGCACCCTCGCCTTCAACGCCGCCCATGTCGACACCTGGAATGGCACCACCTTCATCGTCCCCGTCATC GGGGCTTTCCTCGCCGACTCCTACTGGGGAAAGTACAGGACCATCCTCGCCTCCCTCCTCTTCTACCTCGCCGGCCTTGTGCTCCTCACCGTCTCCGCCGCTGTCCCCTCCCTGCGCCCGGCGCCGTGCACCGGCGTCCCATGCTCACCGGCCACCGGGACCCAGTTCTCCGTCTTCTTCCTCGCGCTCTACCTCACCTCCATCGGAACAGGCGGCGTCAAGTCTGCGCTGCTCCCCTTCGGGGCAGAGCAGTACGAGCGCGACGACCACGACACTGATCAGGAGGGCGCCCCGGCCCCGGAGAAGACGAAGCAATCCTTCTTCAGCTGGTTCTTCGGCGCCATCAACCTCGGCATCTTCGTGGCCGGGACGCTTGTATCGTGGGTGGAGCAGAACGTGTCGTGGGCGCTGGGCTTCGGCATCGCCACGCTCTGCCTGCTCATCGCGTCGGCGGCGTTCCTGGCAGCCACGCCCTGCTACAGGGTGCGCCTCCCCACGGGGGACACCCCCATCAAGGCCATCCTCAGGGTGCTGGTGGCCGCCTTCAGGAACAGGACCCGGACGCTGCCTCCCGACGCCGACGGCGATGGCCTGTACGAAGTCGACGACGACAAGAACAAGAACGGCGGCGATGATGAGAAGCTGGCGCACACCGAGGGGTTACGGTGGCTGGACAAGGCCGCCGTGAGGGTGGACGGGGGCGGCGTGTGGGAGGTGTGCACGGTGAGCGAGGTGGAGCGCGTGAAGGTGCTGGCGCGGATAGTGCCCATCTGGGTGACGTGCGTGCTGTACGCGGCGTCGCTGGGGCAGATGACCACCACCTTCATCCAGCAGGGGATGGCCATGGACACGAGGGTGTTCGGGGGGAGGTTCCGGGTGCCGGTGGCGTCGCTGGTGTCGGTGGAGGTGGTGTTCATGCTGCTGTGGGTGCTGCTCCACGACGTGGTGGTGATGCCGGTGGCGAGGAGGTGGTGGCGCTCGGGTGGTCTGACGCAGCTGCAGCGGATGGGCGTGGGGCGTGTGCTGGTGGTGGTGGCCATGGCGACGGCTGCTCTGGTGGAGAGGCGGAGGCTGCGAGGGGAGAAGCGGTCGATGAGCATCTTGTGGCAGGTGCCACAGTTCGTGGTGCTGGCTGGATCCGACGTGTTCAGCGGCATCGCGCAGCTGGAGTTCTTCTACGGCGAGGCGCCCGGGTCCATGCGCAGCATCTGCTCCGCTTTCTCCTTCCTCGCCCTCTCCCTCGGCTTCTACGTCAACTCGCTCGTCGTCACCATCGTGGCGGCGGTCACCAAGAGGAGCGACGGCTCCGGCGGCTGGCTGGCGCCGGACCTGGACACGGCCCACCTCGACTACTACTTCTGGCTCTGGGCCCTCATCAGCCTCGCCAACCTCGCCCTCTACCTGCTGCTCGCCGCCCGCTACAAGTCCAAGAAGCCCTCGCCACCGCATTCTTCTTCTCATCCCTAGCCACTACCACTATCATCTCCTTCTTCTTCCTCCACCATTAATTGTTCATCCATCATCATCATAGACATACCATATATACGCACGCATATCTCATCTCATCTGTAAGATGGATCATACATAGTCTGCAGCAGTGCATCTTGTATCTTTCTACCTATAGCCTATAGTTTGCTTCTGAATTTAACATCGGAATCCAGGGAATTGAACTGACGACAAACTTTTCTGCATACGATCGAATTGGTAGCTTTTGGGCAGAAACAGCCGTTTTTTTGACAAATTGACCCTTTTCAAAAACTTATTTCGAAACTAACCCCTGCTAAAAACTTCAACTAAAACTAGGCCGTCGGCTCAGCGCCAAGCGCATTGGCGCTGAGGTTGGCCGTGTCAGCGCCAACGGGACTGGCGCTGACATTGTGCCACCGTGGCGGCCGGGCCGATCCCCCAGCTGACGTGGCAGCTACCTCAGCGCCAACCGCTTCGGCGCTGAGGTGCCCAACATCAGCGCCAAGTACGTTGGCGCTGATCTTGGCTACTTTGAGCCCGGCCGAGGCCGCCCCAGCCAGTTAGTCCTCTGTTTTTCCCCAGCCGCCCGCCTAGGGTTCGGTCGCCACCGCGTTCTCCTCGCCCAATCTCCCCCAAAAACCTCTCTAATCGAAGGTGATTTGTGTGGCATTGAGTTTGGGATCGGAAGAGAAGGTAAACCCCTCTATAAACCCTAAGTTCCCCAAAGTTTTATTGGATATTTTGTATTGTTTTGGTTGTAGACGTGGTTTGATAATAGTTGGCTAAGGATGGATTATTAGATGGATAATGTGGGTGGGGATGAAGTGTGGAGGTGGCATATCTTTATCCATTTGGTTGTTGTTGATACATTTGACAAAATATATTTGGGATGAATGT]


>consensus_6204#0 ATATATCGATATGTATGATGATGATGAAGAAGATGATGGTATCGAATCAAACTAATTAAA CCGGACAGTTGTTGTTGATGATGATATACGATCGAGCAGGAGCAGCTGAGGATTAGTACA GAATCCATATATTGGTAGCTACGAGCCTACGACCTCGCTGCCTCGTATCGTGAAATGAGA TACTAGCTAGAAAGGTGGTGGTAGGGGATAGATCCGGGGCGGGCGGCATGAGCATGAATA ATATGATGGGTAGTCCACCAAGTCGTAGCAGGGGCAGGGATGAGAAGAAGAAGAGGTGGA AGTGGAAGCTTGGGCCGGCCACCATCCTGGGGTTCGAGCTGCTGGAGAGCATCGCCTTCT CCGGCGTGGCGCTGAACCTGGTGGTGTACCTGGCCACCGTCCTTCACGGCACCCTCGCCT TCAACGCCGCCCATGTCGACACCTGGAATGGCACCACCTTCATCGTCCCCGTCATCGGGG GCTTTCCTCGCCGACTCCTACTGGGGAAAGTACAGGACCATCCTCGCCTCCCTCCTCTTC TACCTCGCCGGCCTTGTGCTCCTCACCGTCTCCGCCGCTGTCCCCTCCCTGCGCCCGGCG CCGTGCACCGGCGTCCCATGCTCACCGGCCACCGGGACCCAGTTCTCCGTCTTCTTCCTC GCGCTCTACCTCACCTCCATCGGAACAGGCGGCGTCAAGTCTGCGCTGCTCCCCTTCGGG GCAGAGCAGTACGAGCGCGACGACCACGACACTGATCAGGAGGGCGCCCCGGCCCCGGAG AAGACGAAGCAATCCTTCTTCAGCTGGTTCTTCGGCGCCATCAACCTCGGCATCTTCGTG GCCGGGACGCTTGTATCGTGGGTGGAGCAGAACGTGTCGTGGGCGCTGGGCTTCGGCATC GCCACGCTCTGCCTGCTCATCGCGTCGGCGGCGTTCCTGGCAGCCACGCCCTGCTACAGG GTGCGCCTCCCCACGGGGGACACCCCCATCAAGGCCATCCTCAGGGTGCTGGTGGCCGCC TTCAGGAACAGGACCCGGACGCTGCCTCCCGACGCCGACGGCGATGGCCTGTACGAAGTC GACGACGACAAGAACAAGAACGGCGGCGATGATGAGAAGCTGGCGCACACCGAGGGGTTA CGGTGGCTGGACAAGGCCGCCGTGAGGGTGGACGGGGGCGGCGTGTGGGAGGTGTGCACG GTGAGCGAGGTGGAGCGCGTGAAGGTGCTGGCGCGGATAGTGCCCATCTGGGTGACGTGC GTGCTGTACGCGGCGTCGCTGGGGCAGATGACCACCACCTTCATCCAGCAGGGGATGGCC ATGGACACGAGGGTGTTCGGGGGGAGGTTCCGGGTGCCGGTGGCGTCGCTGGTGTCGGTG GAGGTGGTGTTCATGCTGCTGTGGGTGCTGCTCCACGACGTGGTGGTGATGCCGGTGGCG AGGAGGTGGTGGCGCTCGGGTGGTCTGACGCAGCTGCAGCGGATGGGCGTGGGGCGTGTG CTGGTGGTGGTGGCCATGGCGACGGCTGCTCTGGTGGAGAGGCGGAGGCTGCGAGGGGAG AAGCGGTCGATGAGCATCTTGTGGCAGGTGCCACAGTTCGTGGTGCTGGCTGGATCCGAC GTGTTCAGCGGCATCGCGCAGCTGGAGTTCTTCTACGGCGAGGCGCCCGGGTCCATGCGC AGCATCTGCTCCGCTTTCTCCTTCCTCGCCCTCTCCCTCGGCTTCTACGTCAACTCGCTC GTCGTCACCATCGTGGCGGCGGTCACCAAGAGGAGCGACGGCTCCGGCGGCTGGCTGGCG CCGGACCTGGACACGGCCCACCTCGACTACTACTTCTGGCTCTGGGCCCTCATCAGCCTC GCCAACCTCGCCCTCTACCTGCTGCTCGCCGCCCGCTACAAGTCCAAGAAGCCCTCGCCA CCGCATTCTTCTTCTCATCCCTAGCCACTACCACTATCATCTCCTTCTTCTTCCTCCACC ATTAATTGTTCATCCATCATCATCATAGACATACCATATATACGCACGCATATCTCATCT CATCTGTAAGATGGATCATACATAGTCTGCAGCAGTGCATCTTGTATCTTTCTACCTATA GCCTATAGTTTGCTTCTGAATTTAACATCGGAATCCAGGGAATTGAACTGACGACAAACT TTTCTGCATACGATCGAATTGGTAGCTTTTGGGCAGAAACAGCCGTTTTTTTGACAAATT GACCCTTTTCAAAAACTTATTTCGAAACTAACCCCTGCTAAAAACTTCAACTAAAACTAG GCCGTCGGCTCAGCGCCAAGCGCATTGGCGCTGAGGTTGGCCGTGTCAGCGCCAACGGGA CTGGCGCTGACATTGTGCCACCGTGGCGGCCGGGCCGATCCCCCAGCTGACGTGGCAGCT ACCTCAGCGCCAACCGCTTCGGCGCTGAGGTGCCCAACATCAGCGCCAAGTACGTTGGCG CTGATCTTGGCTACTTTGAGCCCGGCCGAGGCCGCCCCAGCCAGTTAGTCCTCTGTTTTT CCCCAGCCGCCCGCCTAGGGTTCGGTCGCCACCGCGTTCTCCTCGCCCAATCTCCCCCAA AAACCTCTCTAATCGAAGGTGATTTGTGTGGCATTGAGTTTGGGATCGGAAGAGAAGGTA AACCCCTCTATAAACCCTAAGTTCCCCAAAGTTTTATTGGATATTTTGTATTGTTTTGGT TGTAGACGTGGTTTGATAATAGTTGGCTAAGGATGGATTATTAGATGGATAATGTGGGTG GGGATGAAGTGTGGAGGTGGCATATCTTTATCCATTTGGTTGTTGTTGATACATTTGACA AAATATATTTGGGATGAATGT



consensusID : consensus_6204#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 637
fasta sequence
                              [TGCGCGAACACCAGGGGAAACCCGGTCGATGACCATCCTGTGCCAGGCGCCCCATTTTCTGGTTCTGGCTGGATCCGACGTGTTTACGGGCATCGCGCAACTGGAGTTCTTTTACGGCGAGGCGCCCGGGTCCCTCCCCAGCATTTGCTCCGCCTTCTCCTTCCTCGCCCTATCCCTGGGGTTTTACGTCAACTCGCTCGTAGTCACCATCGTGGCGGCGGTCCCCAAGAGGAGCGACGGCTCCGGCGGCTGGCTGGCGCCGGACCTGGACACGGCCCACCTCGACTACTACTTCTGGCTCTGGGCCCTCATCAGCCTCGCCAACCTCGCCCTCTACCTGCTGCTCGCCGCCCGCTACAAGTCCAAGAAGCCCTCGCCACCACATTCTTCTTCTCATCCCTAGCCCCTACCACTATAGCTTAATCATCTCCTTCCTCCACCATTAATTGTTCATCCATCATCATCATAGACATACCATATATACGCACGCATATCTCATCTCATCTGTAAGATGGATCCATCGATGATCCATCTATATAGTCTGCAGCAGTGCATCTTGTATCTTTCTACCTATAGCCTATACTTTGCTTCTGAATTTAACATCGGAATCCAGGGAATTGAACTGAAAAAAAAAAAA]

[-] EMBL CA759002             [TGCGCGAACACCAGGGGAAACCCGGTCGATGACCATCCTGTGCCAGGCGCCCCATTTTCTGGTTCTGGCTGGATCCGACGTGTTTACGGGCATCGCGCAACTGGAGTTCTTTTACGGCGAGGCGCCCGGGTCCCTCCCCAGCATTTGCTCCGCCTTCTCCTTCCTCGCCCTATCCCTGGGGTTTTACGTCAACTCGCTCGTAGTCACCATCGTGGCGGCGGTCCCCAAGAGGAGCGACGGCTCCGGCGGCTGGCTGGCGCCGGACCTGGACACGGCCCACCTCGACTACTACTTCTGGCTCTGGGCCCTCATCAGCCTCGCCAACCTCGCCCTCTACCTGCTGCTCGCCGCCCGCTACAAGTCCAAGAAGCCCTCGCCACCACATTCTTCTTCTCATCCCTAGCCCCTACCACTATAGCTTAATCATCTCCTTCCTCCACCATTAATTGTTCATCCATCATCATCATAGACATACCATATATACGCACGCATATCTCATCTCATCTGTAAGATGGATCCATCGATGATCCATCTATATAGTCTGCAGCAGTGCATCTTGTATCTTTCTACCTATAGCCTATACTTTGCTTCTGAATTTAACATCGGAATCCAGGGAATTGAACTGAAAAAAAAAAAA]


>consensus_6204#1 TGCGCGAACACCAGGGGAAACCCGGTCGATGACCATCCTGTGCCAGGCGCCCCATTTTCT GGTTCTGGCTGGATCCGACGTGTTTACGGGCATCGCGCAACTGGAGTTCTTTTACGGCGA GGCGCCCGGGTCCCTCCCCAGCATTTGCTCCGCCTTCTCCTTCCTCGCCCTATCCCTGGG GTTTTACGTCAACTCGCTCGTAGTCACCATCGTGGCGGCGGTCCCCAAGAGGAGCGACGG CTCCGGCGGCTGGCTGGCGCCGGACCTGGACACGGCCCACCTCGACTACTACTTCTGGCT CTGGGCCCTCATCAGCCTCGCCAACCTCGCCCTCTACCTGCTGCTCGCCGCCCGCTACAA GTCCAAGAAGCCCTCGCCACCACATTCTTCTTCTCATCCCTAGCCCCTACCACTATAGCT TAATCATCTCCTTCCTCCACCATTAATTGTTCATCCATCATCATCATAGACATACCATAT ATACGCACGCATATCTCATCTCATCTGTAAGATGGATCCATCGATGATCCATCTATATAG TCTGCAGCAGTGCATCTTGTATCTTTCTACCTATAGCCTATACTTTGCTTCTGAATTTAA CATCGGAATCCAGGGAATTGAACTGAAAAAAAAAAAA



consensusID : consensus_6204#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 167
fasta sequence
                              [TCGGCACGAGTCTCCTTCTNCTNCCTCCACCATTAATTGTTCATCCATCATCATCATAGACATACCATATATACGCACGCATATCTCATCTCATCTGTAAGATGGATCATACATAGTCTGCAGCAGTGCATCTTGTATCTTTCTACCTATAGCCTATAGTTTGCTTC]

[+] EMBL AA752039             [TCGGCACGAGTCTCCTTCTNCTNCCTCCACCATTAATTGTTCATCCATCATCATCATAGACATACCATATATACGCACGCATATCTCATCTCATCTGTAAGATGGATCATACATAGTCTGCAGCAGTGCATCTTGTATCTTTCTACCTATAGCCTATAGTTTGCTTC]


>consensus_6204#2 TCGGCACGAGTCTCCTTCTNCTNCCTCCACCATTAATTGTTCATCCATCATCATCATAGA CATACCATATATACGCACGCATATCTCATCTCATCTGTAAGATGGATCATACATAGTCTG CAGCAGTGCATCTTGTATCTTTCTACCTATAGCCTATAGTTTGCTTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6204#0      ATATATCGATATGTATGATGATGATGAAGAAGATGATGGTATCGAATCAAACTAATTAAA 60
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      CCGGACAGTTGTTGTTGATGATGATATACGATCGAGCAGGAGCAGCTGAGGATTAGTACA 120
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      GAATCCATATATTGGTAGCTACGAGCCTACGACCTCGCTGCCTCGTATCGTGAAATGAGA 180
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      TACTAGCTAGAAAGGTGGTGGTAGGGGATAGATCCGGGGCGGGCGGCATGAGCATGAATA 240
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      ATATGATGGGTAGTCCACCAAGTCGTAGCAGGGGCAGGGATGAGAAGAAGAAGAGGTGGA 300
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      AGTGGAAGCTTGGGCCGGCCACCATCCTGGGGTTCGAGCTGCTGGAGAGCATCGCCTTCT 360
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      CCGGCGTGGCGCTGAACCTGGTGGTGTACCTGGCCACCGTCCTTCACGGCACCCTCGCCT 420
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      TCAACGCCGCCCATGTCGACACCTGGAATGGCACCACCTTCATCGTCCCCGTCATCGGGG 480
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      GCTTTCCTCGCCGACTCCTACTGGGGAAAGTACAGGACCATCCTCGCCTCCCTCCTCTTC 540
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      TACCTCGCCGGCCTTGTGCTCCTCACCGTCTCCGCCGCTGTCCCCTCCCTGCGCCCGGCG 600
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      CCGTGCACCGGCGTCCCATGCTCACCGGCCACCGGGACCCAGTTCTCCGTCTTCTTCCTC 660
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      GCGCTCTACCTCACCTCCATCGGAACAGGCGGCGTCAAGTCTGCGCTGCTCCCCTTCGGG 720
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      GCAGAGCAGTACGAGCGCGACGACCACGACACTGATCAGGAGGGCGCCCCGGCCCCGGAG 780
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      AAGACGAAGCAATCCTTCTTCAGCTGGTTCTTCGGCGCCATCAACCTCGGCATCTTCGTG 840
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      GCCGGGACGCTTGTATCGTGGGTGGAGCAGAACGTGTCGTGGGCGCTGGGCTTCGGCATC 900
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      GCCACGCTCTGCCTGCTCATCGCGTCGGCGGCGTTCCTGGCAGCCACGCCCTGCTACAGG 960
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      GTGCGCCTCCCCACGGGGGACACCCCCATCAAGGCCATCCTCAGGGTGCTGGTGGCCGCC 1020
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      TTCAGGAACAGGACCCGGACGCTGCCTCCCGACGCCGACGGCGATGGCCTGTACGAAGTC 1080
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      GACGACGACAAGAACAAGAACGGCGGCGATGATGAGAAGCTGGCGCACACCGAGGGGTTA 1140
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      CGGTGGCTGGACAAGGCCGCCGTGAGGGTGGACGGGGGCGGCGTGTGGGAGGTGTGCACG 1200
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      GTGAGCGAGGTGGAGCGCGTGAAGGTGCTGGCGCGGATAGTGCCCATCTGGGTGACGTGC 1260
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      GTGCTGTACGCGGCGTCGCTGGGGCAGATGACCACCACCTTCATCCAGCAGGGGATGGCC 1320
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      ATGGACACGAGGGTGTTCGGGGGGAGGTTCCGGGTGCCGGTGGCGTCGCTGGTGTCGGTG 1380
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      GAGGTGGTGTTCATGCTGCTGTGGGTGCTGCTCCACGACGTGGTGGTGATGCCGGTGGCG 1440
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      AGGAGGTGGTGGCGCTCGGGTGGTCTGACGCAGCTGCAGCGGATGGGCGTGGGGCGTGTG 1500
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      CTGGTGGTGGTGGCCATGGCGACGGCTGCTCTGGTGGAGAGGCGGAGGCTGCGAGGGGAG 1560
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      -----------------------------------------TGCGCGAACACCAGGGGAA 19
                                                                                  

consensus_6204#0      AAGCGGTCGATGAGCATCTTGTGGCAGGTGCCACAGTTCGTGGTGCTGGCTGGATCCGAC 1620
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ACCCGGTCGATGACCATCCTGTGCCAGGCGCCCCATTTTCTGGTTCTGGCTGGATCCGAC 79
                                                                                  

consensus_6204#0      GTGTTCAGCGGCATCGCGCAGCTGGAGTTCTTCTACGGCGAGGCGCCCGGGTCCATGCGC 1680
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      GTGTTTACGGGCATCGCGCAACTGGAGTTCTTTTACGGCGAGGCGCCCGGGTCCCTCCCC 139
                                                                                  

consensus_6204#0      AGCATCTGCTCCGCTTTCTCCTTCCTCGCCCTCTCCCTCGGCTTCTACGTCAACTCGCTC 1740
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      AGCATTTGCTCCGCCTTCTCCTTCCTCGCCCTATCCCTGGGGTTTTACGTCAACTCGCTC 199
                                                                                  

consensus_6204#0      GTCGTCACCATCGTGGCGGCGGTCACCAAGAGGAGCGACGGCTCCGGCGGCTGGCTGGCG 1800
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      GTAGTCACCATCGTGGCGGCGGTCCCCAAGAGGAGCGACGGCTCCGGCGGCTGGCTGGCG 259
                                                                                  

consensus_6204#0      CCGGACCTGGACACGGCCCACCTCGACTACTACTTCTGGCTCTGGGCCCTCATCAGCCTC 1860
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      CCGGACCTGGACACGGCCCACCTCGACTACTACTTCTGGCTCTGGGCCCTCATCAGCCTC 319
                                                                                  

consensus_6204#0      GCCAACCTCGCCCTCTACCTGCTGCTCGCCGCCCGCTACAAGTCCAAGAAGCCCTCGCCA 1920
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      GCCAACCTCGCCCTCTACCTGCTGCTCGCCGCCCGCTACAAGTCCAAGAAGCCCTCGCCA 379
                                                                                  

consensus_6204#0      CCGCATTCTTCTTCTCATCCCTAGCCACTACCACTATCATCT--CCTTCTTCTTCCTCCA 1978
consensus_6204#2      ---------------------------TCGGCACGA--GTCT--CCTTCTNCTNCCTCCA 29
consensus_6204#1      CCACATTCTTCTTCTCATCCCTAGCCCCTACCACTATAGCTTAATCATCTCCTTCCTCCA 439
                                                     *** *     *   * *** ** ******

consensus_6204#0      CCATTAATTGTTCATCCATCATCATCATAGACATACCATATATACGCACGCATATCTCAT 2038
consensus_6204#2      CCATTAATTGTTCATCCATCATCATCATAGACATACCATATATACGCACGCATATCTCAT 89
consensus_6204#1      CCATTAATTGTTCATCCATCATCATCATAGACATACCATATATACGCACGCATATCTCAT 499
                      ************************************************************

consensus_6204#0      CTCATCTGTAAGATGGATCA--------------TACATAGTCTGCAGCAGTGCATCTTG 2084
consensus_6204#2      CTCATCTGTAAGATGGATCA--------------TACATAGTCTGCAGCAGTGCATCTTG 135
consensus_6204#1      CTCATCTGTAAGATGGATCCATCGATGATCCATCTATATAGTCTGCAGCAGTGCATCTTG 559
                      *******************               ** ***********************

consensus_6204#0      TATCTTTCTACCTATAGCCTATAGTTTGCTTCTGAATTTAACATCGGAATCCAGGGAATT 2144
consensus_6204#2      TATCTTTCTACCTATAGCCTATAGTTTGCTTC---------------------------- 167
consensus_6204#1      TATCTTTCTACCTATAGCCTATACTTTGCTTCTGAATTTAACATCGGAATCCAGGGAATT 619
                      *********************** ********                            

consensus_6204#0      GAACTGACGACAAACTTTTCTGCATACGATCGAATTGGTAGCTTTTGGGCAGAAACAGCC 2204
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      GAACTGAAAAAAAAAAAA------------------------------------------ 637
                                                                                  

consensus_6204#0      GTTTTTTTGACAAATTGACCCTTTTCAAAAACTTATTTCGAAACTAACCCCTGCTAAAAA 2264
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      CTTCAACTAAAACTAGGCCGTCGGCTCAGCGCCAAGCGCATTGGCGCTGAGGTTGGCCGT 2324
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      GTCAGCGCCAACGGGACTGGCGCTGACATTGTGCCACCGTGGCGGCCGGGCCGATCCCCC 2384
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      AGCTGACGTGGCAGCTACCTCAGCGCCAACCGCTTCGGCGCTGAGGTGCCCAACATCAGC 2444
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      GCCAAGTACGTTGGCGCTGATCTTGGCTACTTTGAGCCCGGCCGAGGCCGCCCCAGCCAG 2504
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      TTAGTCCTCTGTTTTTCCCCAGCCGCCCGCCTAGGGTTCGGTCGCCACCGCGTTCTCCTC 2564
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      GCCCAATCTCCCCCAAAAACCTCTCTAATCGAAGGTGATTTGTGTGGCATTGAGTTTGGG 2624
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      ATCGGAAGAGAAGGTAAACCCCTCTATAAACCCTAAGTTCCCCAAAGTTTTATTGGATAT 2684
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      TTTGTATTGTTTTGGTTGTAGACGTGGTTTGATAATAGTTGGCTAAGGATGGATTATTAG 2744
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      ATGGATAATGTGGGTGGGGATGAAGTGTGGAGGTGGCATATCTTTATCCATTTGGTTGTT 2804
consensus_6204#2      ------------------------------------------------------------
consensus_6204#1      ------------------------------------------------------------
                                                                                  

consensus_6204#0      GTTGATACATTTGACAAAATATATTTGGGATGAATGT 2841
consensus_6204#2      -------------------------------------
consensus_6204#1      -------------------------------------
                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)