These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_621#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 492 fasta sequence [GATCCCCTCCGTAACGGCTTGACAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACCCCCCTTAATTCTTCAAACAATTTTTTTTAAAACTTTGGCCTTTTCTTTGCCCCCAACCCCTTTTGGTACCTTCCAACAAAAGGCTTTTGATGCCCCCCATTTTTGGGTTAAAACACCTTTTTTAAGGCTTAAAAGGGGAAAAACCCTTTAAACCATCCCCCATTATTACCTATTACCAAACCATTCACCACCCACCTAATTCCCTTCATATTTTGGGGGGCCCAAGAAAAAACTTGTGAATACCGGGCTTAATCTCAGGGGTTTTGCCCCCCCCATATTTTTTTACCCCTTGCTTTGGGAACCCCCTTCCCTCCAAAGGGTTTTGAACCCCTCAAGTTGCCCTCCTTACTTTGTAAACCCTAATTTCGGGGTTCCCGGTAATTTTCCGAAAAACCTGAAACCCCAAAATCCCAA] [+] EMBL CF327850 [GATCCCCTCCGTAACGGCTTGACAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACCCCCCTTAATTCTTCAAACAATTTTTTTTAAAACTTTGGCCTTTTCTTTGCCCCCAACCCCTTTTGGTACCTTCCAACAAAAGGCTTTTGATGCCCCCCATTTTTGGGTTAAAACACCTTTTTTAAGGCTTAAAAGGGGAAAAACCCTTTAAACCATCCCCCATTATTACCTATTACCAAACCATTCACCACCCACCTAATTCCCTTCATATTTTGGGGGGCCCAAGAAAAAACTTGTGAATACCGGGCTTAATCTCAGGGGTTTTGCCCCCCCCATATTTTTTTACCCCTTGCTTTGGGAACCCCCTTCCCTCCAAAGGGTTTTGAACCCCTCAAGTTGCCCTCCTTACTTTGTAAACCCTAATTTCGGGGTTCCCGGTAATTTTCCGAAAAACCTGAAACCCCAAAATCCCAA] consensusID : consensus_621#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 229 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAACAAATATTTTTAAAACTTTTGATTATTTTTTGCCCCCAAACCCTTTTGGTACCTTCCAAAAAAAGGCTTTTGATGCCCCCCATTTTTTGGATAAAACAACTTTTTTAAGGCTTAAAAGGGGAAAAATCCTTTAAATCATTCCCCATTATTACCTATTACCAAACCATTCAACACC] [+] EMBL CF320572 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAACAAATATTTTTAAAACTTTTGATTATTTTTTGCCCCCAAACCCTTTTGGTACCTTCCAAAAAAAGGCTTTTGATGCCCCCCATTTTTTGGATAAAACAACTTTTTTAAGGCTTAAAAGGGGAAAAATCCTTTAAATCATTCCCCATTATTACCTATTACCAAACCATTCAACACC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_621#0 GATCCCCTCCGTAACGGCTTGACAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 60 consensus_621#1 -----------------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31 ******************************* consensus_621#0 TTTTTTTTTTTTTTAACCCCCCTTAATTCTTCAAACAATTTTTTTTAAAACTTTGGCCTT 120 consensus_621#1 TTTTTTTTTTTTTT------------TTTTTAAAACAAATATTTTTAAAACTTTTGATTA 79 ************** ** ** ****** * ************* * * consensus_621#0 TTCTTTGCCCCCAACCCCTTTTGGTACCTTCCAACAAAAGGCTTTTGATGCCCCCCATTT 180 consensus_621#1 TTTTTTGCCCCCAAACCCTTTTGGTACCTTCCAAAAAAAGGCTTTTGATGCCCCCCATTT 139 ** *********** ******************* ************************* consensus_621#0 TTGGGTTAAAACACCTTTTTTAAGGCTTAAAAGGGGAAAAACCCTTTAAACCATCCCCCA 240 consensus_621#1 TTTGGATAAAACAACTTTTTTAAGGCTTAAAAGGGGAAAAATCCTTTAAATCATTCCCCA 199 ** ** ******* *************************** ******** *** ***** consensus_621#0 TTATTACCTATTACCAAACCATTCACCACCCACCTAATTCCCTTCATATTTTGGGGGGCC 300 consensus_621#1 TTATTACCTATTACCAAACCATTCAACACC------------------------------ 229 ************************* **** consensus_621#0 CAAGAAAAAACTTGTGAATACCGGGCTTAATCTCAGGGGTTTTGCCCCCCCCATATTTTT 360 consensus_621#1 ------------------------------------------------------------ consensus_621#0 TTACCCCTTGCTTTGGGAACCCCCTTCCCTCCAAAGGGTTTTGAACCCCTCAAGTTGCCC 420 consensus_621#1 ------------------------------------------------------------ consensus_621#0 TCCTTACTTTGTAAACCCTAATTTCGGGGTTCCCGGTAATTTTCCGAAAAACCTGAAACC 480 consensus_621#1 ------------------------------------------------------------ consensus_621#0 CCAAAATCCCAA 492 consensus_621#1 ------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||