These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6221#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1823 fasta sequence [AAGTAGTACCAAGTACCAACTACCAAGTTCCAATATTAATTCGATTCTTATGTTGAGGCGCGGCCAAACTGCCGCGGGATCATCCTTCTCCCACCGGAGACTCCCGAGATGAGGCGAGGGGAATCGAAGGCGGCGACGAGGGGCGCAAATCGATCGTCGTCGTCGTCGTCGTGGAAGAGCAGATATATTGGATATGGCTTAGTTCTTGGCTTCGTGTTGATGCTGCTCTACTTGATGGTCAATGCGCAGTTCAGCAACAGCCCAAATGCTTATTTAGGCCCAGCAACAACTAGTAAAACTGAATCGATTCCTGCTACAACATATCAAGGGAATCAAGCATGGC---AAGATGGGAGCAGAGGACTGGAGGAAGGCCACAGGGAGGAGGTAGCTAG----CACAC--AACGATCAACAGGCCAACGTCAAGAGAAAGATGACGAAAGCGAGAAGCAACGAACAGAGAAAAATTCAATCGAGGAACAATTAGGCAACGACAGGAGCTCTAACTACTGGGAGGAAGGACGCCAATCCGAGAAGAAGGATACGATAGAATTCAGTGAATTCGGAGGAGGAACGGACGACTTCAACAATGTTGCCAACACCAAGCCGATCTGCGACACGTCGTTCGGCAAGTACGACATCTGCGTGCTCGACGGCGACACGCGAGCGCAGGGAGGCGGCGGCGCCGGCGCCGCCGTGGTCACCCTGGTCTCGCCGCGCGCGGCGCCGCGGGAGTGGAAGATAAAGCCCTACTCCCGGAAGTACCTCGACGGCCTCAAACCCGTCACGGTGAGGTCCGTCCCCAACCCGGAGGACGCCCCGCCGTGCACGACGCGGCTGAACGTCCCGGCGATGGTGATCGAGCTCGGCGGGCTCACCGGCAACTACTGGCACGACTTCACCGACGTGCTCGTCCCGCTCTTCATCGGCGCGCGTCGCTTCGGCGGCGAGGTCCAGCTCCTC-GTC-GTCAACCT-GCTGCCCTTCTGGGTG-GACAAGTACCGGAGGATCTTCAGCCAGATCTCGCGGCACGACATCGTCGACCTG-GAGAAGGACGACGACCGCGGCGTCGTCCGCTGTTACCCGCACGTGGTGGTCGGCTATGGCAG-CCGCAAGGAGTTCACCATCGACCCCTCCCTCGAC-GACACCGGCGGC-GGCTACACCATGGTCAACTTCACCGAGTTCTTGAGGCAATC-CTACTCGCTCCCGCGTGACCGGCCGATCAAGCTCGGTACCAACCACGGTGCACGGCCGCGGATGATGATCCTGGAGCGGACCAACAGCCGGAAGCTGATGAACCTCCCGGAGGTCGCCGCGGCCGCGCGAGCGGCGGGGTTCGAGGTGACCGTCGCCGGCGGCCGTCCGACGAGCACCTACGACGAGTTCGCCCGGGAGGTGAACTCGTACGACGTGATGGTGGGCGTGCACGGCGCCGGGCTGACCAACTGCGTGTTCCTCCCCACGGGGGCCGTGCTGCTGCAGATCGTGCCGTACGGCCGGCTCGAGAGCATCGCGCAGACGGACTTCGGCGAGCCGGCGCGAGACATGGGGCTCCGGTACATCGAGTACGACATCGCCGCCGACGAGAGCTCGCTGATGGACGTGTTCGGCAAGGACCACCCCATGATCAAGGACCCCGTCGCCGTGCACTTGAGCGGGTGGGGAAACGTGGCCGAGTGGTACCTCGGGAAGCAGGACGTGCGGGTCAACATTGAGCGGTTTAGGCCGTTTCTGACGCAGGCGTTGGAGCACCTGCAGTAGCGATCCTTTTTCTCGATGAACAAGCAAAAATGTATATGCATAACACGACGGTGCGTTTTCCTATTCTTATT] [-] EMBL BI306711 [AAGTAGTACCAAGTACCAACTACCAAGTTCCAATATTAATTCGATTCTTATGTTGAGGCGCGGCCAAACTGCCGCGGGATCATCCTTCTCCCACCGGAGACTCCCGAGATGAGGCGAGGGGAATCGAAGGCGGCGACGAGGGGCGCAAATCGATCGTCGTCGTCGTCGTCGTGGAAGAGCAGATATATTGGATATGGCTTAGTTCTTGGCTTCGTGTTGATGCTGCTCTACTTGATGGTCAATGCGCAGTTCAGCAACAGCCCAAATGCTTATTTAGGCCCAGCAACAACTAGTAAAACTGAATCGATTCCTGCTACAACATATCAAGGGAATCAAGCATGGC AAGATGGGAGCAGAGGACTGGAGGAAGGCCACAGGGAGGAGGTAGCTAG CACAC AACGATCAACAGGCCAACGTCAAGAGAAAGATGACGAAAGCGAGAA ] [+] EMBL AK121999 [ CCTTCTGCCACCGGAGACTCCCGAGATGAGGCGAGGGGAATCGAAGGCGGCGACGAGGGGCGCAAATCGATCGTCGTCGTCGTCGTCGTGGAAGAGCAGATATATTGGATATGGCTTAGTTCTTGGCTTCGTGTTGGTGCTGCTCTACTTGATGGTCAATGCGCAGTTCAGCAACAGCCCAAATGCTTATTTAGGCCCAGCAACAACTAGTAAAACTGAATCGATTCCTGCTACAACATATCAAGGGAATCAAGCATGGCAAGAAGATGGGAGCAGAGGACTGGAGGAAGGCCACAGGGAGGAGGTAGCTAGTACACACACGGAACGATCAACAGGCCAACGTCAAGAGAAAGATGACGAAAGCGAGAAGCAACGAACAGAGAAAAATTCAATCGAGGAACAATTAGGCAACGACAGGAGCTCTAACTACTGGGAGGAAGGACGCCAATCCGAGAAGAAGGATACGATAGAATTCAGTGAATTCGGAGGAGGAACGGACGACTTCAACAATGTTGCCAACACCAAGCCGATCTGCGACACGTCGTTCGGCAAGTACGACATCTGCGTGCTCGACGGCGACACGCGAGCGCAGGGAGGCGGCGGCGCCGGCGCCGCCGTGGTCACCCTGGTCTCGCCGCGCGCGGCGCCGCGGGAGTGGAAGATAAAGCCCTACTCCCGGAAGTACCTCGACGGCCTCAAACCCGTCACGGTGAGGTCCGTCCCCAACCCGGAGGACGCCCCGCCGTGCACGACGCGGCTGAACGTCCCGGCGATGGTGATCGAGCTCGGCGGGCTCACCGGCAACTACTGGCACGACTTCACCGACGTGCTCGTCCCGCTCTTCATCGGCGCGCGTCGCTTCGGCGGCGAGGTCCAGCTCCTC GTC GTCAACCT GCTGCCCTTCTGGGTG GACAAGTACCGGAGGATCTTCAGCCAGATCTCGCGGCACGACATCGTCGACCTG GAGAAGGACGACGACCGCGGCGTCGTCCGCTGTTACCCGCACGTGGTGGTCGGCTATGGCAG CCGCAAGGAGTTCACCATCGACCCCTCCCTCGAC GACACCGGCGGC GGCTACACCATGGTCAACTTCACCGAGTTCTTGAGGCAATC CTACTCGCTCCCGCGTGACCGGCCGATCAAGCTCGGTACCAACCACGGTGCACGGCCGCGGATGATGATCCTGGAGCGGACCAACAGCCGGAAGCTGATGAACCTCCCGGAGGTCGCCGCGGCCGCGCGAGCGGCGGGGTTCGAGGTGACCGTCGCCGGCGGCCGTCCGACGAGCACCTACGACGAGTTCGCCCGGGAGGTGAACTCGTACGACGTGATGGTGGGCGTGCACGGCGCCGGGCTGACCAACTGCGTGTTCCTCCCCACGGGGGCCGTGCTGCTGCAGATCGTGCCGTACGGCCGGCTCGAGAGCATCGCGCAGACGGACTTCGGCGAGCCGGCGCGAGACATGGGGCTCCGGTACATCGAGTACGACATCGCCGCCGACGAGAGCTCGCTGATGGACGTGTTCGGCAAGGACCACCCCATGATCAAGGACCCCGTCGCCGTGCACTTGAGCGGGTGGGGAAACGTGGCCGAGTGGTACCTCGGGAAGCAGGACGTGCGGGTCAACATTGAGCGGTTTAGGCCGTTTCTGACGCAGGCGTTGGAGCACCTGCAGTAGCGATCCTTTTTCTCGATGAACAAGCAAAAATGTATATGCATAACACGACGGTGCGTTTTCCTATTCTTATT] [-] EMBL BI810891 [ CCCGCTCTTCATCGGCGCGCATCACTTC GCGGCGAGGTCCAGCTCCTCAGTCAGTCAACCTGGCTGCCCTTCTGGGTGTGACAAGTACCGGAGGATCTTCAGCCAGATCTCGCGGCACAACATCGTCGACCTGTGAGAAGGACGACGACCGCGGCGTCGTCCGCTGTTACCCGCACGTGGTGGTCGGCTATGGCAGTCCGCAAGGAGTTCACCATCGACCCCTCCCTCGACAGACACCGGCGGCAGGCTACACCATGGTCAACTTCACCGAGTTCTTGAGGCAATCACTACTCGCTCCCGCGTGACCGGCCGATCAAGCTCGGTACCAACCACGGTGCACGGCCGCGGATGATGATCCTGGAGCGGACCAACAGCCGGAAGCTGATGAACCTCCCGG ] [+] EMBL CF325635 [ GGGGTTCGAGGTGACCGTCGCCGGCGGCCGTCCGACGAGCACCTACGACGAGTTCGCCCGGGAGGTGAACTCGTACGACGTGATGGTGGGCGTGCACGGCGCCGGGCTGACCAACTGCGTGTTCCTCCCCACGGGGGCCGTGCTGCTGCAGATCGTGCCGTACGGCCGGCTCGATAGCATCGCGCATACGGACTTCGGCGAGCCGGCGCGAGACATGGGGCTCCGGTACATC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||