cluster # 6223

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Oryza sativa
cluster # 6223 cluster # 6223 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6223#0 length = 1412 sequences # 4
consensusID : consensus_6223#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1412
fasta sequence
                              [ACAAGGCGCCCTCCGCTGAGCTTGGCTTGGCAACGCGGAGGGACGGACAATACTGACCTCTGAGAAAGAAGACATTGAGGGAGGAATAAACACAATGCCATTGGCCCGTTGAGGAAGGGTGAGAGCCAATTAATTGTTAACAAGAATTGACCATATAGAGAGGTTCAATCTTGTTAACAGCAAATTTTGACGTTCACCCTTGGCAGACGGTTTTGCGAATTCGAGAAGAGAAGGCGCGTGCACACACAAAAAAGGAATTTCAGGTGAAAGGGCATGAGCACAAAGATGAA-GAAGGGAATCCTAAGACCATTCCGCTACATCTCTAACATGATGGATGGTAAGGAGGCGGCACAAGACATGCAGATTGGATTCCCCACGGATGTGAAACACGTGGCGCACATCGGATGGGATGGGCCTAGTGTCCCCAACAACAATAATAATACTGCAGGAGCACCTAGCTGGATGAAGGATTACCATTCGGCGCCACTGGACTCAGCCTCATTTAGGAGCGACAGAGGGGGCTCTGCTGCAGCTAATCCATGGGCTTCTCAAGAAATCGTGGTAGACGGAGGAAGCCTAGGAGACACATCCTTCAGTGAAACCAGAAGCGAGGCCAGCGGCAGCATGGACATCACCGCCGGCGACTCCCCGCCGTCGCCCGACTCCCGCCGGTCGAGGCGGCACCGCTCCAGGGGCTCCGCCGCCACCTCCTCCATGGACTGCACGGCCGCCGACGGCGGCGCCGCCCCGGAGAAGAAGGACAAGGCCAAGAAGAGCTCCCGCGGCAAGAACCGCAAGAAGGACAAGTCCGACAAGTCGGCGGCCGCCGGCGCCGGCGACGACGCCTCCGGCGCCACCTGCCAGGACCTCCCCGCCGTGCCCAAGAAGTCCAACCGCCGGAAAAACAAGGGCGGCTCGGAGGGCACCGGCGCCGCTGCGGCCTCCAAGGCCGACGGCGCCGGAGCCGGCGGGGAGGACGCGGCGGCGCCAGAGCCGCCGGCGACCGAAGAAGCTCAAGATCACGACTGATAAAAAAAAAAAGACACGAACACGAACTTCTTTCGGGAGACGAAATCGATGAAACTAAACTAAAGCTTGTCACGTCACGCTCCGGATTTGCTTCGAGCGAGCTCGGATTTAGATGGATGGGTATATAGATTTTGCTCGATCATGCATGGCGACGTTCGAAGAAGAAACGGGGTGTGTGCACGCCCTAATTCAAACTGATCCTTTCCTCTCAATTTTTTTTCCCTTTTTCTTTCTCTCTCTCCCTACTGTAATACTATTTGATCGACATTTTGTTGAATATGTGTTGTGTTGTTCCTGACTCACATATATAAAGTGTACCAAGTGGGATTATGTACGTTTTGTATAACCGCGGTGAAATATTCTGTGAAATTTAATGGATCCCT]

[+] EMBL C73185               [ACAAGGCGCCCTCCGCTGAGCTTGGCTTGGCAACGCGGAGGGACGGACAATACTGACCTCTGAGAAAGAAGACATTGAGGGAGGAATAAACACAATGCCATTGGCCCGTTGAGGAAGGGTGAGAGCCAATTANTTGTTAACAAGANTTGACCATATAGAGAGGTTCAATCTTGTTAACAGCAAATTTTNACGTTCACCCTTGGCAGACGGTTTTGCGAATTCGAGAAGAGAAGGCGCGTGCACACACAAAAAAGGAATTTCAGGTGAAAGGGCATGAGCACAAAGATGAAGGAAGGGAATCCTAAGACCATTCCGCTACATCTCTAACATGATGGATGGTAAGGAGGCGGCACAAGACATGCAGATTNGATTCCCCACGGATGTTNAACACGTGGCGCACATCGGNTTGGGTTGGCCTAGTGTCCCC ACAAC ATAATAATTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK099317             [        CCCTCCGCTGAGCTTGGCTTGGCAACGCGGAGGGACGGACAATACTGACCTCTGAGAAAGAAGACATTGAGGGAGGAATAAACACAATGCCATTGGCCCGTTGAGGAAGGGTGAGAGCCAATTAATTGTTAACAAGAATTGACCATATAGAGAGGTTCAATCTTGTTAACAGCAAATTTTGACGTTCACCCTTGGCAGACGGTTTTGCGAATTCGAGAAGAGAAGGCGCGTGCACACACAAAAAAGGAATTTCAGGTGAAAGGGCATGAGCACAAAGATGAA GAAGGGAATCCTAAGACCATTCCGCTACATCTCTAACATGATGGATGGTAAGGAGGCGGCACAAGACATGCAGATTGGATTCCCCACGGATGTGAAACACGTGGCGCACATCGGATGGGATGGGCCTAGTGTCCCCAACAACAATAATAATACTGCAGGAGCACCTAGCTGGATGAAGGATTACCATTCGGCGCCACTGGACTCAGCCTCATTTAGGAGCGACAGAGGGGGCTCTGCTGCAGCTAATCCATGGGCTTCTCAAGAAATCGTGGTAGACGGAGGAAGCCTAGGAGACACATCCTTCAGTGAAACCAGAAGCGAGGCCAGCGGCAGCATGGACATCACCGCCGGCGACTCCCCGCCGTCGCCCGACTCCCGCCGGTCGAGGCGGCACCGCTCCAGGGGCTCCGCCGCCACCTCCTCCATGGACTGCACGGCCGCCGACGGCGGCGCCGCCCCGGAGAAGAAGGACAAGGCCAAGAAGAGCTCCCGCGGCAAGAACCGCAAGAAGGACAAGTCCGACAAGTCGGCGGCCGCCGGCGCCGGCGACGACGCCTCCGGCGCCACCTGCCAGGACCTCCCCGCCGTGCCCAAGAAGTCCAACCGCCGGAAAAACAAGGGCGGCTCGGAGGGCACCGGCGCCGCTGCGGCCTCCAAGGCCGACGGCGCCGGAGCCGGCGGGGAGGACGCGGCGGCGCCAGAGCCGCCGGCGACCGAAGAAGCTCAAGATCACGACTGATAAAAAAAAAAAGACACGAACACGAACTTCTTTCGGGAGACGAAATCGATGAAACTAAACTAAAGCTTGTCACGTCACGCTCCGGATTTGCTTCGAGCGAGCTCGGATTTAGATGGATGGGTATATAGATTTTGCTCGATCATGCATGGCGACGTTCGAAGAAGAAACGGGGTGTGTGCACGCCCTAATTCAAACTGATCCTTTCCTCTCAATTTTTTTTCCCTTTTTCTTTCTCTCTCTCCCTACTGTAATACTATTTGATCGACATTTTGTTGAATATGTGTTGTGTTGTTCCTGACTCACATATATAAAGTGTACCAAGTGGGATTATGTACGTTTTGTATAACCGCGGTGAAATATTCTGTGAAATTTAATGGATCCCT]
[+] EMBL AK072251             [                      TGGCTTGGCAACGCGGAGGGACGGACAATACTGACCTCTGAGAAAGAAGACATTGAGGGAGGAATAAACACAATGCCATTGGCCCGTTGAGGAAGGGTGAGAGCCAATTAATTGTTAACAAGAATTGACCATATAGAGAGGTTCAATCTTGTTAACAGCAAATTTTGACGTTCACCCTTGGCGGACGGTTTTGCGAATTCGAGAAGAGAAGGCGCGTGCACACACAAAAAAGGAATTTCAGGTGAAAGGGCATGAGCACAAAGATGAA GAAGGGAATCCTAAGACCATTCCGCTACATCTCTAACATGATGGATGGTAAGGAGGCGGCACAAGACATGCAGATTGGATTCCCCACGGATGTGAAACACGTGGCGCACATCGGATGGGATGGGCCTAGTGTCCCCAACAACAATAATAATACTGCAGGAGCACCTAGCTGGATGAAGGATTACCATTCGGCGCCACTGGACTCAGCCTCATTTAGGAGCGACAGAGGGGGCTCTGCTGCAGCTAATCCATGGGCTTCTCAAGAAATCGTGGTAGACGGAGGAAGCCTAGGAGACACATCCTTCAGTGAAACCAGAAGCGAGGCCAGCGGCAGCATGGACATCACCGCCGGCGACTCCCCGCCGTCGCCCGACTCCCGCCGGTCGAGGCGGCACCGCTCCAGGGGCTCCGCCGCCACCTCCTCCATGGACTGCACGGCCGCCGACGGCGGCGCCGCCCCGGAGAAGAAGGACAAGGCCAAGAAGAGCTCCCGCGGCAAGAACCGCAAGAAGGACAAGTCCGACAAGTCGGCGGCCGCCGGCGCCGGCGACGACGCCTCCGGCGCCACCTGCCAGGACCTCCCCGCCGTGCCCAAGAAGTCCAACCGCCGGAAAAACGAGGGCGGCTCGGAGGGCACCGGCGCCGCTGCGGCCTCCAAGGCCGACGGCGCCGGAGCCGGCGGGGAGGACGCGGCGGCGCCAGAGCCGCCGGCGACCGAAGAAGCTCAAGATCACGACTGATAAAAAAAAAAAGACACGAACACGAACTTCTTTCGGGAGACGAAATCGATGAAACTAAACTAAAGCTTGTCACGTCACGCTCCGGATTTGCTTCGAGCGAGCTCGGATTTAGATGGATGGGTATGTAGATTTTGCTCGATCATGCATGGCGACGTTCGAAGAAGAAACGGGGTGTGTGCACGCCCTAATTCAAACTGATCCTTTCCTCTCAATTTTTTTTCCCTTTTTCTTTCTCTCTCTCCCTACTGTAATACTATTTGATCGACATTTTGTTGAATATGTGTTGTGTTGTTCCTGACTCACATATATAAAGTGTACCAAGTGGGATTATGTACGTTTTGTATAACCGCGGTGAAATATTCTGTGAAATTTAATGGATC   ]
[+] EMBL AU085947             [                       GGCTTGGCAACGCGGAGGGACGGACAATACTGACCTCTGAGAAAGAAGACATTGAGGGAGGAATAAACACAATGCCATTGGCCCGTTGAGGAAGGGTGAGAGCCAATTAATTGTTAACAAGAATTGACCATATAGAGAGGTTCAATCTTGTTAACAGCAAATTTTGACGTTCACCCTTGGCAGACGGTTTTGCGAATTCGAGAAGAGAAGGCGCGTGCACACACAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_6223#0
ACAAGGCGCCCTCCGCTGAGCTTGGCTTGGCAACGCGGAGGGACGGACAATACTGACCTC
TGAGAAAGAAGACATTGAGGGAGGAATAAACACAATGCCATTGGCCCGTTGAGGAAGGGT
GAGAGCCAATTAATTGTTAACAAGAATTGACCATATAGAGAGGTTCAATCTTGTTAACAG
CAAATTTTGACGTTCACCCTTGGCAGACGGTTTTGCGAATTCGAGAAGAGAAGGCGCGTG
CACACACAAAAAAGGAATTTCAGGTGAAAGGGCATGAGCACAAAGATGAAGAAGGGAATC
CTAAGACCATTCCGCTACATCTCTAACATGATGGATGGTAAGGAGGCGGCACAAGACATG
CAGATTGGATTCCCCACGGATGTGAAACACGTGGCGCACATCGGATGGGATGGGCCTAGT
GTCCCCAACAACAATAATAATACTGCAGGAGCACCTAGCTGGATGAAGGATTACCATTCG
GCGCCACTGGACTCAGCCTCATTTAGGAGCGACAGAGGGGGCTCTGCTGCAGCTAATCCA
TGGGCTTCTCAAGAAATCGTGGTAGACGGAGGAAGCCTAGGAGACACATCCTTCAGTGAA
ACCAGAAGCGAGGCCAGCGGCAGCATGGACATCACCGCCGGCGACTCCCCGCCGTCGCCC
GACTCCCGCCGGTCGAGGCGGCACCGCTCCAGGGGCTCCGCCGCCACCTCCTCCATGGAC
TGCACGGCCGCCGACGGCGGCGCCGCCCCGGAGAAGAAGGACAAGGCCAAGAAGAGCTCC
CGCGGCAAGAACCGCAAGAAGGACAAGTCCGACAAGTCGGCGGCCGCCGGCGCCGGCGAC
GACGCCTCCGGCGCCACCTGCCAGGACCTCCCCGCCGTGCCCAAGAAGTCCAACCGCCGG
AAAAACAAGGGCGGCTCGGAGGGCACCGGCGCCGCTGCGGCCTCCAAGGCCGACGGCGCC
GGAGCCGGCGGGGAGGACGCGGCGGCGCCAGAGCCGCCGGCGACCGAAGAAGCTCAAGAT
CACGACTGATAAAAAAAAAAAGACACGAACACGAACTTCTTTCGGGAGACGAAATCGATG
AAACTAAACTAAAGCTTGTCACGTCACGCTCCGGATTTGCTTCGAGCGAGCTCGGATTTA
GATGGATGGGTATATAGATTTTGCTCGATCATGCATGGCGACGTTCGAAGAAGAAACGGG
GTGTGTGCACGCCCTAATTCAAACTGATCCTTTCCTCTCAATTTTTTTTCCCTTTTTCTT
TCTCTCTCTCCCTACTGTAATACTATTTGATCGACATTTTGTTGAATATGTGTTGTGTTG
TTCCTGACTCACATATATAAAGTGTACCAAGTGGGATTATGTACGTTTTGTATAACCGCG
GTGAAATATTCTGTGAAATTTAATGGATCCCT
clustalw multiple alignements is not computed in this case