cluster # 6238

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Oryza sativa
cluster # 6238 cluster # 6238 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6238#0 length = 1515 sequences # 4
consensusID : consensus_6238#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1515
fasta sequence
                              [TCTCTCTCCTCTGATACTGCAGAGGCGAGCTGTGCTGGGCGGGAGCTTACTTGGCGAGATGAAGAGGAGGCATTGGAGCCACCCGTCGTGCGGCCTCCTCCTGCTCGTCGCCGTCTTCTGCCTTCTCCTCGTCTTCCGCTGCTCCCAGCTGCGCCATTCCGGCGATGGCGCCGCGGCCGCCGCGCCGGATGGTGGTGCGGGACGGAACGATGGTGATGACGTTGACGAGAGGCTTGTGGAGCTCGCGGCCGTGGACCCGGCGGCGATGGCGGTGCTGCAGGCGGCAAAGAGGCTGCTCGAAGGGAACCTGGCGAGGGCGCCGGAGAGGCACCGCGACGTCGCGCTCCGGGGGCTGAGGGAGTGGGTCGGCAAGCAGGAGCGGTTCGACCCCGGCGTGATGTCCGAGCTCGTGGAACTCATCAAGCGCCCCATCGATCGGTACAACGGCGACGGTGGTGGCGGCGGCGAGGGGGAGGGCCGGAGGTACGCGTCTTGCGCGGTGGTCGGGAACAGCGGGATCCTGCTGGCGGCGGAGCACGGCGAGCTCATCGACGGGCACGAGCTCGTGGTCCGCCTCAACAACGCGCCGGCGGGGGACGGTCGGTACGCGCGCCACGTCGGCGCGAGGACCGGCCTCGCGTTCCTCAACAGCAACGTGCTGAGCCAGTGCGCCGTCCCGCGCCGCGGCGCCTGCTTCTGCCGCGCCTACGGCGAGGGCGTGCCCATCCTGACGTACATGTGCAACGCCGCGCACTTCGTCGAGCACGCCGTGTGCAACAACGCCTCCTCCTCCTCGTCGGGCGCCGCCGACGCCACCGCGGCGGCGCCGGTGATCGTGACGGACCCGAGGCTGGACGCGCTGTGCGCGCGGATCGTCAAGTACTACTCGCTGCGGCGGTTCGCGCGGGAGACGGGGCGGCCGGCGGAGGAGTGGGCGCGGCGGCACGAGGAAGGCATGTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGGCCGCGGCGGGCGTGTGCGACCGCGTGTCGGTGTTCGGGTTCGGCAAGGACGCGTCGGCGCGGCACCACTACCACACGCTGCAACGGCGCGAGCTGGACCTTCACGACTACGAGGCGGAGTACGAGTTCTACCGTGACCTCGAGTCGCGGCCCGAGGCGATACCCTTCCTGCGCCAACGCAACTCCGGCTTCCGCCTGCCGCCCGTGTCGTTCTACCGCTGACACGCCACGCACGCAACCCCGCAAACGCATAGCATGCATAAAATTCTTTTTTGTAATTAGATACGTGTTTTAGTCATTGCAACAAAGCGAAGCAAACGTAAACAACAATCCGTGAACATTTGGGTCGTGAACTCGTGATCAGCTCGCTNATCTTTTGCCGTGCTTTGGCTGCAACGACATTGGCTTTGTTTGCGACGACNGCCACGATACTTTCGTTAGCCTCGATGGCGCGCAACTTGCACTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGNNNNNGNNNNCC]

[+] EMBL AK070719             [TCTCTCTCCTCTGATACTGCAGAGGCGAGCTGTGCTGGGCGGGAGCTTACTTGGCGAGATGAAGAGGAGGCATTGGAGCCACCCGTCGTGCGGCCTCCTCCTGCTCGTCGCCGTCTTCTGCCTTCTCCTCGTCTTCCGCTGCTCCCAGCTGCGCCATTCCGGCGATGGCGCCGCGGCCGCCGCGCCGGATGGTGGTGCGGGACGGAACGATGGTGATGACGTTGACGAGAGGCTTGTGGAGCTCGCGGCCGTGGACCCGGCGGCGATGGCGGTGCTGCAGGCGGCAAAGAGGCTGCTCGAAGGGAACCTGGCGAGGGCGCCGGAGAGGCACCGCGACGTCGCGCTCCGGGGGCTGAGGGAGTGGGTCGGCAAGCAGGAGCGGTTCGACCCCGGCGTGATGTCCGAGCTCGTGGAACTCATCAAGCGCCCCATCGATCGGTACAACGGCGACGGTGGTGGCGGCGGCGAGGGGGAGGGCCGGAGGTACGCGTCTTGCGCGGTGGTCGGGAACAGCGGGATCCTGCTGGCGGCGGAGCACGGCGAGCTCATCGACGGGCACGAGCTCGTGGTCCGCCTCAACAACGCGCCGGCGGGGGACGGTCGGTACGCGCGCCACGTCGGCGCGAGGACCGGCCTCGCGTTCCTCAACAGCAACGTGCTGAGCCAGTGCGCCGTCCCGCGCCGCGGCGCCTGCTTCTGCCGCGCCTACGGCGAGGGCGTGCCCATCCTGACGTACATGTGCAACGCCGCGCACTTCGTCGAGCACGCCGTGTGCAACAACGCCTCCTCCTCCTCGTCGGGCGCCGCCGACGCCACCGCGGCGGCGCCGGTGATCGTGACGGACCCGAGGCTGGACGCGCTGTGCGCGCGGATCGTCAAGTACTACTCGCTGCGGCGGTTCGCGCGGGAGACGGGGCGGCCGGCGGAGGAGTGGGCGCGGCGGCACGAGGAAGGCATGTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGGCCGCGGCGGGCGTGTGCGACCGCGTGTCGGTGTTCGGGTTCGGCAAGGACGCGTCGGCGCGGCACCACTACCACACGCTGCAACGGCGCGAGCTGGACCTTCACGACTACGAGGCGGAGTACGAGTTCTACCGTGACCTCGAGTCGCGGCCCGAGGCGATACCCTTCCTGCGCCAACGCAACTCCGGCTTCCGCCTGCCGCCCGTGTCGTTCTACCGCTGACACGCCACGCACGCAACCCCGCAAACGCATAGCATGCATAAAATTCTTTTTTGTAATTAGATACGTGTTTTAGTCATTGCAACAAAGCGAAGCAAACGTAAACAACAATCCGTGAACAT                                                                                                                                                                                       ]
[+] EMBL AK104647             [     CTCCTCTGATACTGCAGAGGCGAGCTGTGCTGGGCGGGAGCTTACTTGGCGAGATGAAGAGGAGGCATTGGAGCCACCCGTCGTGCGGCCTCCTCCTGCTCGTCGCCGTCTTCTGCCTTCTCCTCGTCTTCCGCTGCTCCCAGCTGCGCCATTCCGGCGATGGCGCCGCGGCCGCCGCGCCGGATGGTGGTGCGGGACGGAACGATGGTGATGACGTTGACGAGAGGCTTGTGGAGCTCGCGGCCGTGGACCCGGCGGCGATGGCGGTGCTGCAGGCGGCAAAGAGGCTGCTCGAAGGGAACCTGGCGAGGGCGCCGGAGAGGCACCGCGACGTCGCGCTCCGGGGGCTGAGGGAGTGGGTCGGCAAGCAGGAGCGGTTCGACCCCGGCGTGATGTCCGAGCTCGTGGAACTCATCAAGCGCCCCATCGATCGGTACAACGGCGACGGTGGTGGCGGCGGCGAGGGGGAGGGCCGGAGGTACGCGTCTTGCGCGGTGGTCGGGAACAGCGGGATCCTGCTGGCGGCGGAGCACGGCGAGCTCATCGACGGGCACGAGCTCGTGGTCCGCCTCAACAACGCGCCGGCGGGGGACGGTCGGTACGCGCGCCACGTCGGCGCGAGGACCGGCCTCGCGTTCCTCAACAGCAACGTGCTGAGCCAGTGCGCCGTCCCGCGCCGCGGCGCCTGCTTCTGCCGCGCCTACGGCGAGGGCGTGCCCATCCTGACGTACATGTGCAACGCCGCGCACTTCGTCGAGCACGCCGTGTGCAACAACGCCTCCTCCTCCTCGTCGGGCGCCGCCGACGCCACCGCGGCGGCGCCGGTGATCGTGACGGACCCGAGGCTGGACGCGCTGTGCGCGCGGATCGTCAAGTACTACTCGCTGCGGCGGTTCGCGCGGGAGACGGGGCGGCCGGCGGAGGAGTGGGCGCGGCGGCACGAGGAAGGCATGTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGGCCGCGGCGGGCGTGTGCGACCGCGTGTCGGTGTTCGGGTTCGGCAAGGACGCGTCGGCGCGGCACCACTACCACACGCTGCAACGGCGCGAGCTGGACCTTCACGACTACGAGGCGGAGTACGAGTTCTACCGTGACCTCGAGTCGCGGCCCGAGGCGATACCCTTCCTGCGCCAACGCAACTCCGGCTTCCGCCTGCCGCCCGTGTCGTTCTACCGCTGACACGCCACGCACGCAACCCCGCAAACGCATAGCATGCATAAAATTCTTTTTTGTAATTAGATACGTGTTTTAGTCATTGCAACAAAGCGAAGCAAACGTAAACAACAATCCGTGAACAT                                                                                                                                                                                       ]
[+] EMBL AK104762             [     CTCCTCTGATACTGCAGAGGCGAGCTGTGCTGGGCGGGAGCTTACTTGGCGAGATGAAGAGGAGGCATTGGAGCCACCCGTCGTGCGGCCTCCTCCTGCTCGTCGCCGTCTTCTGCCTTCTCCTCGTCTTCCGCTGCTCCCAGCTGCGCCATTCCGGCGATGGCGCCGCGGCCGCCGCGCCGGATGGTGGTGCGGGACGGAACGATGGTGATGACGTTGACGAGAGGCTTGTGGAGCTCGCGGCCGTGGACCCGGCGGCGATGGCGGTGCTGCAGGCGGCAAAGAGGCTGCTCGAAGGGAACCTGGCGAGGGCGCCGGAGAGGCACCGCGACGTCGCGCTCCGGGGGCTGAGGGAGTGGGTCGGCAAGCAGGAGCGGTTCGACCCCGGCGTGATGTCCGAGCTCGTGGAACTCATCAAGCGCCCCATCGATCGGTACAACGGCGACGGTGGTGGCGGCGGCGAGGGGGAGGGCCGGAGGTACGCGTCTTGCGCGGTGGTCGGGAACAGCGGGATCCTGCTGGCGGCGGAGCACGGCGAGCTCATCGACGGGCACGAGCTCGTGGTCCGCCTCAACAACGCGCCGGCGGGGGACGGTCGGTACGCGCGCCACGTCGGCGCGAGGACCGGCCTCGCGTTCCTCAACAGCAACGTGCTGAGCCAGTGCGCCGTCCCGCGCCGCGGCGCCTGCTTCTGCCGCGCCTACGGCGAGGGCGTGCCCATCCTGACGTACATGTGCAACGCCGCGCACTTCGTCGAGCACGCCGTGTGCAACAACGCCTCCTCCTCCTCGTCGGGCGCCGCCGACGCCACCGCGGCGGCGCCGGTGATCGTGACGGACCCGAGGCTGGACGCGCTGTGCGCGCGGATCGTCAAGTACTACTCGCTGCGGCGGTTCGCGCGGGAGACGGGGCGGCCGGCGGAGGAGTGGGCGCGGCGGCACGAGGAAGGCATGTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGGCCGCGGCGGGCGTGTGCGACCGCGTGTCGGTGTTCGGGTTCGGCAAGGACGCGTCGGCGCGGCACCACTACCACACGCTGCAACGGCGCGAGCTGGACCTTCACGACTACGAGGCGGAGTACGAGTTCTACCGTGACCTCGAGTCGCGGCCCGAGGCGATACCCTTCCTGCGCCAACGCAACTCCGGCTTCCGCCTGCCGCCCGTGTCGTTCTACCGCTGACACGCCACGCACGCAACCCCGCAAACGCATAGCATGCATAAAATTCTTTTTTGTAATTAGATACGTGTTTTAGTCATTGCAACAAAGCGAAGCAAACGTAAACAACAATCCGTGAACAT                                                                                                                                                                                       ]
[+] EMBL CA755189             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCGCGCGGGAGACGGGGCGGCCGGCGGAGGAGTGGGCGCGGCGGCACGAGGAAGGCATGTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGGCCGCGGCGGGCGTGTGCGACCGCGTGTCGGTGTTCGGGTTCGGCAAGGACGCGTCGGCGCGGCACCACTACCACACGCTGCAACGGCGCGAGCTGGACCTTCACGACTACGAGGCGGAGTACGAGTTCTACCGTGACCTCGAGTCGCGGCCCGAGGCGATACCCTTCCTGCGCCAACGCAACTCCGGCTTCCGCCTGCCGCCCGTGTCGTTCTACCGCTGACACGCCACGCACGCAACCCCGCANACGCATAGCATGCATAANATTCTTTTTTGTAATTAGATACGTGTTTTAGTCATTGCAACAAAGCGAAGCANACGTAAACNACAATCCGTGAACATTTGGGTCGTGAACTCGTGATCAGCTCGCTNATCTTTTGCCGTGCTTTGGCTGCAACGACATTGGCTTTGTTTGCGACGACNGCCACGATACTTTCGTTAGCCTCGATGGCGCGCAACTTGCACTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGNNNNNGNNNNCC]




>consensus_6238#0
TCTCTCTCCTCTGATACTGCAGAGGCGAGCTGTGCTGGGCGGGAGCTTACTTGGCGAGAT
GAAGAGGAGGCATTGGAGCCACCCGTCGTGCGGCCTCCTCCTGCTCGTCGCCGTCTTCTG
CCTTCTCCTCGTCTTCCGCTGCTCCCAGCTGCGCCATTCCGGCGATGGCGCCGCGGCCGC
CGCGCCGGATGGTGGTGCGGGACGGAACGATGGTGATGACGTTGACGAGAGGCTTGTGGA
GCTCGCGGCCGTGGACCCGGCGGCGATGGCGGTGCTGCAGGCGGCAAAGAGGCTGCTCGA
AGGGAACCTGGCGAGGGCGCCGGAGAGGCACCGCGACGTCGCGCTCCGGGGGCTGAGGGA
GTGGGTCGGCAAGCAGGAGCGGTTCGACCCCGGCGTGATGTCCGAGCTCGTGGAACTCAT
CAAGCGCCCCATCGATCGGTACAACGGCGACGGTGGTGGCGGCGGCGAGGGGGAGGGCCG
GAGGTACGCGTCTTGCGCGGTGGTCGGGAACAGCGGGATCCTGCTGGCGGCGGAGCACGG
CGAGCTCATCGACGGGCACGAGCTCGTGGTCCGCCTCAACAACGCGCCGGCGGGGGACGG
TCGGTACGCGCGCCACGTCGGCGCGAGGACCGGCCTCGCGTTCCTCAACAGCAACGTGCT
GAGCCAGTGCGCCGTCCCGCGCCGCGGCGCCTGCTTCTGCCGCGCCTACGGCGAGGGCGT
GCCCATCCTGACGTACATGTGCAACGCCGCGCACTTCGTCGAGCACGCCGTGTGCAACAA
CGCCTCCTCCTCCTCGTCGGGCGCCGCCGACGCCACCGCGGCGGCGCCGGTGATCGTGAC
GGACCCGAGGCTGGACGCGCTGTGCGCGCGGATCGTCAAGTACTACTCGCTGCGGCGGTT
CGCGCGGGAGACGGGGCGGCCGGCGGAGGAGTGGGCGCGGCGGCACGAGGAAGGCATGTT
CCACTACTCGTCGGGGATGCAGGCGGTGGTGGCCGCGGCGGGCGTGTGCGACCGCGTGTC
GGTGTTCGGGTTCGGCAAGGACGCGTCGGCGCGGCACCACTACCACACGCTGCAACGGCG
CGAGCTGGACCTTCACGACTACGAGGCGGAGTACGAGTTCTACCGTGACCTCGAGTCGCG
GCCCGAGGCGATACCCTTCCTGCGCCAACGCAACTCCGGCTTCCGCCTGCCGCCCGTGTC
GTTCTACCGCTGACACGCCACGCACGCAACCCCGCAAACGCATAGCATGCATAAAATTCT
TTTTTGTAATTAGATACGTGTTTTAGTCATTGCAACAAAGCGAAGCAAACGTAAACAACA
ATCCGTGAACATTTGGGTCGTGAACTCGTGATCAGCTCGCTNATCTTTTGCCGTGCTTTG
GCTGCAACGACATTGGCTTTGTTTGCGACGACNGCCACGATACTTTCGTTAGCCTCGATG
GCGCGCAACTTGCACTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNGNNNNNGNNNNCC
clustalw multiple alignements is not computed in this case