These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6244#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1586 fasta sequence [CATATATTAACAAAGGTGCGGCCTCTAACGAGGTTCAACGCTTCTGCACCTCTGATTTTCACATGGTATCAGAGCCTATCCATCCACAAAATCGCATCTAATCCAACTCATGGCGAGTTCGTCGAAGACGGCGGCCGGGAATCCTCTCGGCGGGAACGCGATCTCGGAGAAACTCTCCAAATCAAACCATGCGCTATGGAAAGCGCAGGTCATGGCGGCTGTACGAGGAGCTCGCCTTGAGGGGCATCTCACCGGTGCCACCAAAACTCCCAACGCCCTGATCACGACGACAGCAGGCGACAAGGGAGAGAAAGAAGTCACTGTTCGCAATCCAGAATTTGATGATTGGGTTGCAACCGATCAGCAGGTTCTAGGATTCCTGCTCTCCACCCTAGCTAGAGACGTTCTGGCACAGGTGGCCACCTGCGGCACGGCTGCAGCAGCATGGCAGATGCTGGAGGAGATGTACTCCTCCGTCACGAGGGCGCGCTTCATCAACACTCGCATCGCTCTCTCCAACACCAAGAAGGGCACTCTCTCCATCAACGAGTATGTCTCCAAGATGAAGGCCCTCGCTGATGAGATGACGGCTGCCGGCAAGATCGTTGATGACGATGATCTCATCTCCTACATCATCGCCGGCCTCGACGACACGTATGAACCTGTCATCTCCACCATCGTTGGCAAGGACACCATGACGCTGGGAGAAGCCTACTCTCAGCTGCTCAGCTTTGAGCAGCGTCTCGCGCTTCGTCACGGTGGAGACTCTTCTGTCAATTTGGCGAACCGAGGACGTGGCGGTGGTGGAGGACAACAACGCGGCGGCAACACCGGCAACGGCGGCCGCGGCCGTGGCGGCAACAACAATGGCGCTAACCGCGGCAGGGGACGCGGCAACAATGGCGGCGCACGACCACCGGGAGGCGTCGACAACAGACCTAAATGTCAACTCTGTTACAAGAGGGGACACACGGTAATCAACTGCTGGTATCGCTATGATGAAGATTTTGTTCCCGATGAAAAATATGCAGGATCGGCAACATCTTATGGGATTGATACAAATTGGTACGTCGACACGAGTGCGACGGACCATGTGACTGGCGAACTGGACAAGCTCACGGTTCGCGATCGCTACAAGGGGCAAGATCAAGTTCACACCGCAAGCGGTGCAGGATCTGGCCACGAAGAAACTTCTGTTTAGGGGACCATGCCGGGGGCGACTGTACGCTCTTCCATCTTCATCACCTCATGAACGTCCTCGTCCTCTAAAAGAAGCCTTTGGAGCCATCAAGCCATCCTTTGAGCGATGGCACAGTCGCCTGGGTCATCCAGCCTCTCCAATTGTG-GAGAAAGTCATTAGCAAAAATAATCTTCCTTGTTTAGCTGAGTCAAATAAACAGTCGGTTTGTGATGCATGTCAACAGGGTAAAAGTCATCAATTGCCCTATTCTAGATCTTCTAGTATGTCGAGTCATCCTTTGGAACTTATTTATTCTGATGTTTGGGGTCCTGCCCTCACTTCTGTTGGGGGCAAACAATATTATGTGAGCTTTATTGGTGATTATAGTAAATTTACTTGGCTTTAT] [+] EMBL AK069268 [CATATATTAACAAAGGTGCGGCCTCTAACGAGGTTCAACGCTTCTGCACCTCTGATTTTCACATGGTATCAGAGCCTATCCATCCACAAAATCGCATCTAATCCAACTCATGGCGAGTTCGTCGAAGACGGCGGCCGGGAATCCTCTCGGCGGGAACGCGATCTCGGAGAAACTCTCCAAATCAAACCATGCGCTATGGAAAGCGCAGGTCATGGCGGCTGTACGAGGAGCTCGCCTTGAGGGGCATCTCACCGGTGCCACCAAAACTCCCAACGCCCTGATCACGACGACAGCAGGCGACAAGGGAGAGAAAGAAGTCACTGTTCGCAATCCAGAATTTGATGATTGGGTTGCAACCGATCAGCAGGTTCTAGGATTCCTGCTCTCCACCCTAGCTAGAGACGTTCTGGCACAGGTGGCCACCTGCGGCACGGCTGCAGCAGCATGGCAGATGCTGGAGGAGATGTACTCCTCCGTCACGAGGGCGCGCTTCATCAACACTCGCATCGCTCTCTCCAACACCAAGAAGGGCACTCTCTCCATCAACGAGTATGTCTCCAAGATGAAGGCCCTCGCTGATGAGATGACGGCTGCCGGCAAGATCGTTGATGACGATGATCTCATCTCCTACATCATCGCCGGCCTCGACGACACGTATGAACCTGTCATCTCCACCATCGTTGGCAAGGACACCATGACGCTGGGAGAAGCCTACTCTCAGCTGCTCAGCTTTGAGCAGCGTCTCGCGCTTCGTCACGGTGGAGACTCTTCTGTCAATTTGGCGAACCGAGGACGTGGCGGTGGTGGAGGACAACAACGCGGCGGCAACACCGGCAACGGCGGCCGCGGCCGTGGCGGCAACAACAATGGCGCTAACCGCGGCAGGGGACGCGGCAACAATGGCGGCGCACGACCACCGGGAGGCGTCGACAACAGACCTAAATGTCAACTCTGTTACAAGAGGGGACACACGGTAATCAACTGCTGGTATCGCTATGATGAAGATTTTGTTCCCGATGAAAAATATGCAGGATCGGCAACATCTTATGGGATTGATACAAATTGGTACGTCGACACGAGTGCGACGGACCATGTGACTGGCGAACTGGACAAGCTCACGGTTCGCGATCGCTACAAGGGGCAAGATCAAGTTCACACCGCAAGCGGTGCAGGATCTGGCCACGAAGAAACTTCTGTTTAGGGGACCATGCCGGGGGCGACTGTACGCTCTTCCATCTTCAT ACCTCATGAACGTCCTCGTCCTCTAAAAGAAGCCTTTGGAGCCATCAAGCCATCCTTTGAGCGATGGCACAGTCGCCTGGGTCATCCAGCCTCTCCAATTGTG GAGAAAGTCATTAGCAAAAATAATCTTCCTTGTTTAGCTGAGTCAAATAAACAGTCGGTTTGTGATGCATGTCAACAGGGTAAAAGTCATCAATTGCCCTATTCTAGATCTTCTAGTATGTCGAGTCATCCTTTGGAACTTATTTATTCTGATGTTTGGGGTCCTGCCCTCACTTCTGTTGGGGGCAAACAATATTATGTGAGCTTTATTGGTGATTATAGTAAATTTACTTGGCTTTAT] [+] EMBL CF322909 [ GGCAACAACAATGGCGCTAACCGCGGCAGGGGACGCGGCAACAATGGCGGCGCACGACCACCGGGAGGCGTCGACAACAGACCTAAATGTCAACTCTGTTACAAGAGGGGACACACGGTAATCAACTGCTGGTATCGCTATGATGAAGATTTTGTTCCCGATGAAAAATATGCAGGATCGGCAACATCTTATGGGATTGATACAAATTGGTACGTCGACACGAGTGCGACGGACCATGTGACTGGCGAACTGGACAAGCTCACGGTTCGCGATCGCTACAAGGGGCAAGATCAAGTTCACACCGCAAGCGGTGCAGGATCTGGCCACGAAGAAACTTCTGTTTAGGGGACCATGCCGGGGGCGACTGTACGCTCTTCCATCTTCATCACCTCATGAACGTCCTCGTCCTCTAAAAGAAGCCTTTGGAGCCATCAAGCCATCCTTTGAGCGATGGCACAGTCGCCTGGGTCATCCAGCCTCTCCAATTGTG GAGAAAGTCATTAGCAAAAATAATCTTCCTTGTTTAGCTGAGTCAAATAAACAGTCGGTTTGTGATGCATGTCAACAGGGTAAAAGTCATCAATTGCCCTATTCTAGATCTTCTAGTATGTCGAGTCATCCTTTGGAACTTATT ] [+] EMBL CF322453 [ GGCAACAACAATGGCGCTAACCGCGGCAGGGGACGCGGCAACAATGGCGGCGCACGACCACCGGGAGGCGTCGACAACAGACCTAAATGTCAACTCTGTTACAAGAGGGGACACACGGTAATCAACTGCTGGTATCGCTATGATGAAGATTTTGTTCCCGATGAAAAATATGCAGGATCGGCAACATCTTATGGGATTGATACAAATTGGTACGTCGACACGAGTGCGACGGACCATGTGACTGGCGAACTGGACAAGCTCACGGTTCGCGATCGCTACAAGGGGCAAGATCAAGTTCACACCGCAAGCGGTGCAGGATCTGGCCACGAAGAAACTTCTGTTTAGGGGACCATGCCGGGGGCGACTGTACGCTCTTCCATCTTCATCACCTCATGAACGTCCTCGTCCTCTAAAAGAAGCCTTTGGAGCCATCAAGCCATCCTTTGAGCGATGGCACAGTCGCCTGGGTCATCCAGCCTCTCCAATTGTGNGAGAAAGTCATTAGCAAAAATAATCTTCCTTGTTTAGCTGAGTC AATAAACAGTCGGTTTGTGATGCATGTCAACAGGGTAAAAGTCATCAATTGCCCTATTCTAGATCTTCTAGTATGTCGAGTCATC ] [+] EMBL CF324347 [ GGCAACAACAATGGCGCTAACCGCGGCAGGGGACGCGGCAACAATGGCGGCGCACGACCACCGGGAGGCGTCGACAACAGACCTAAATGTCAACTCTGTTACAAGAGGGGACACACGGTAATCAACTGCTGGTATCGCTATGATGAAGATTTTGTTCCCGATGAAAAATATGCAGGATCGGCAACATCTTATGGGATTGATACAAATTGGTACGTCGACACGAGTGCGACGGACCATGTGACTGGCGAACTGGACAAGCTCACGGTTCGCGATCGCTACAAGGGGCAAGATCAAGTTCACACCGCAAGCGGTGCAGGATCTGGCCACGAAGAAACTTCTGTTTAGGGGACCATGCCGGGGGCGACTGTACGCTCTTCCATCTTCATCACCTCATGAACGTCCTCGTCCTCTAAAAGAAGCCTTTGGAGCCATCAAGCCATCCT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||