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Oryza sativa
cluster # 6254 cluster # 6254       Sequences # 4       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6254#0 length = 3063 sequences # 2  
 consensus_6254#1 length = 581 sequences # 2  
consensusID : consensus_6254#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3063
fasta sequence 
                              [GGGGGGGGGCCAAAACCCAGCCCACTAAAACCACACTCCGATCCGAAACCGTCTTCGTCTTCGTCTCCGGCCGCCTCTCCGCCTCCACTCTTCCTCCTCCCGGCGGCGAGCTTCCCCTCTCCGCCCGCGCCCATGGCGCCCACGGTTCTGATGGTCGCGGAGAAGCCCAGCATCGCGCTCTCCATCGCCTCCGCCCTCTCCGGCGGCCGCATGTCTACAAGGAAGGGAAGTACAGATGTCCATGAGTTTGATGGGATGTTTCAGGGTTCTCATGCATTTTTCAAAGTGACATCAGTCATTGGACATGTCTTGAGTGTAGATTTTCCACCTGCATATCAGAATTGGGAAGGGACTGATCCGATGGATCTATTTGTGGCTCCAGTTCTGCGATCTGAATGCAACCCTAAGGCTCATATCCGCAGGCATCTAGCTCAGGAAGCTCGAGGCTGCACCTACTTGGTACTCTGGCTTGATTGTGACCGAGAAGGAGAAAACATATGCTATGAAGTAATTGATTGCACTGGAATTCCTAAAAGTGAGGTTGGCAGAAGAATTTTCCGAGCCAAATTTTCGTCCGTTACTGAGAAAGATATAATGGATGCTATGAATAATCTTGTTTTGCCAAGTAAAGATGAGGCACTAGCAGTTGATGCTCGCCAAGAAATTGACTTGAAGGTAGGAGTAGCATTTACTCGATTTCAAACCAGATATTTTCAAGGAAAATATGGAAATCTCGACTCAAGAGTAATTTCGTATGGTCCATGCCAAACACCTACACTTGGATTCTGTGTACAACGCTATCAGCAGATTACCACATTCAAACCAGAGAAATTTTGGTCCTTGAAAACTTATGTTATCAAGGATGGTAATGAAATTCAGCTTGAATGGGATAGGAAGAAACTTTTTGATTTTGATGTTACTGTAATGTTCCAAAAGATGGTGGCCAGTGATGGTATTTTAAAAGTAACCGACATATCAGTGAAGGAAGAGTGCAAAGCCCGCCCGCCTGGCCTTAATACAGTTAATTTGCTTAAGGTTGCATCAAGTGCACTAGGTATTGGACCTCAGACAGCAATGCACTTGGCAGAGAGGCTTTATACCCAAGGATTCATCAGTTATCCACGTACAGAGAGCACTGCCTATCCTTCATCATTTGATTTTAGGAGTGCACTCGCTGCACTTGCACATAATCCTTTGTGGTCCAATGATGTTCGGACGTTACTGGACACTGGGTTTGTTAAGCCCAAACAGGGTCATGATGCTGGGGACCATCCCCCAATAACTCCAATGAGATTGGCAACAGAAGAAGCTTTGGGAACTGATGCTTGGAGGCTGTACCAGTACATTTGTCAGCATTTTATTGGCACTGTCAGTCCTGATTGTAGATATACGAGGACTTCCATTGAGTTCACTTCAGGTGGAGAGACTTTCCACTGTGTTGGCAACCGGGTCACTTCTAAAGGATTTACTTCTATTATGCCATGGCTGGCTGTGAGTGAGAATAATATCCCTGCATATAAAAAGGGCGATGCTGTTAGCATCCATAAGGTTGACATATATGAGGGTAGCACCACACCTCCTGACTACCTTAGTGAGAGTGAATTGATCTCTCTCATGGAGAAGAATGGCATAGGTACAGATGCATCAATTCCTGTGCATGTAAACAACATCTGCGAGCGTAATTATGTTCAGGTGAATTCCGGAAGAAGATTAGTACCAACACCCCTGGGAACTACATTGATAAGAGGGTATCAGTGCATTGATGCTGATCTGTGCTTACCAGATATCCGAAGGTTTATTGAGCAGCAGATTACTCTAATTGCAAAAGGTGAAGCTGACCATCTTCAAGTTGTGCAGCATGTTCTTCAGCAGTTTATGAAAAAGTACTCGTACTTTGTGAAAAAGATTGAAAACATGGATGCTTTGTTCGAAGCACAGTTTTCACCTTTGGCTGACTCTGGACGTTTACTGAGCAAGTGTGGAAAATGTGCTCGGTATATGAAGTACATTTCCACTCAGCCAATGAGGCTGTACTGTGTAACTTGTGAAGAGGTCTACTATCTTCCCCAGAACGGTTCCATTAAGCTTTACAAGGAAATCATTTGCCCCCTTGATGGGTTTGAGTTGCTACTGTTTTCAATGGTTGGCCCTGATGCAAAATCCTTCCCACTGTGTCCTTTTTGCTACAACAGTCCTCCATTTGAAGGCATCGACAAACTCTTCGGTGCACTCAAGCTTGATGACACTGGCAAGGTTGGGAAAGGGGCTGGCATGCCATGCTTCCTCTGCCTGCACCCCACATGTAAACAATCTATGATCACTCAAGGAGTTTGTGCTTGTCCTGAGTGTACTGGTACCCTAATTCTTGATCCAGTCAGCGCACCCAAATGGCGGCTTTACTGCAATAGATGTAACTGCATTGTCCTGCTCCCACATGCCGCTCATAAGATCAGTACTACAGATAAGAAGTGCCCAACATGTGAGTCTACTATCATCGAAGTTGATTTTAACAAGAAAACTACCCCACTTAAGGATGGAGCTACTTTGCATGAGGGTTGCATCTTGTGCGATGAGCTGTTGCATTCGCTCATTGAGATGAAGCATGGGAAGTCATTTTTTATGAGGAGAGGTAGAGGAAGAGGCAGGGGTAGAGGTCGAGGGAGAGGAAGCAGTAGGGGAAGACGGGGGAGCTCAAGACACGATGATCCTAAGATGAGCTTCAGAGATTTCTGAAAGTTTCAGGGCTTAAACCTATATGTAAGTACATGCAACACTAGTTAGAAACTTAACCACCACTGTTGTTCTTTCCATTTTCTTCCTGTATAAACCCTAGATCAAGTTATCTTTCATGGTTTTGCTACCATGCTAAGACTGTTATTTCTGTTTCTATTGGATGAAGTTAGGCTTGTTTCCCAGGTTGAAGAATGGCTGTGTAGCATCGATCTTATGTAAACAGTGGTTGGTAAATGGTAACAGGGCCAACGGTTGCAAGGGTTGGTGAGATACTGACAATTGAGAACTTCTGGGTCGTAATGCGTTTACCAACGACACAACACGAGGCAA]

[+] EMBL AK066999             [GGGGGGGGGCCAAAACCCAGCCCACTAAAACCACACTCCGATCCGAAACCGTCTTCGTCTTCGTCTCCGGCCGCCTCTCCGCCTCCACTCTTCCTCCTCCCGGCGGCGAGCTTCCCCTCTCCGCCCGCGCCCATGGCGCCCACGGTTCTGATGGTCGCGGAGAAGCCCAGCATCGCGCTCTCCATCGCCTCCGCCCTCTCCGGCGGCCGCATGTCTACAAGGAAGGGAAGTACAGATGTCCATGAGTTTGATGGGATGTTTCAGGGTTCTCATGCATTTTTCAAAGTGACATCAGTCATTGGACATGTCTTGAGTGTAGATTTTCCACCTGCATATCAGAATTGGGAAGGGACTGATCCGATGGATCTATTTGTGGCTCCAGTTCTGCGATCTGAATGCAACCCTAAGGCTCATATCCGCAGGCATCTAGCTCAGGAAGCTCGAGGCTGCACCTACTTGGTACTCTGGCTTGATTGTGACCGAGAAGGAGAAAACATATGCTATGAAGTAATTGATTGCACTGGAATTCCTAAAAGTGAGGTTGGCAGAAGAATTTTCCGAGCCAAATTTTCGTCCGTTACTGAGAAAGATATAATGGATGCTATGAATAATCTTGTTTTGCCAAGTAAAGATGAGGCACTAGCAGTTGATGCTCGCCAAGAAATTGACTTGAAGGTAGGAGTAGCATTTACTCGATTTCAAACCAGATATTTTCAAGGAAAATATGGAAATCTCGACTCAAGAGTAATTTCGTATGGTCCATGCCAAACACCTACACTTGGATTCTGTGTACAACGCTATCAGCAGATTACCACATTCAAACCAGAGAAATTTTGGTCCTTGAAAACTTATGTTATCAAGGATGGTAATGAAATTCAGCTTGAATGGGATAGGAAGAAACTTTTTGATTTTGATGTTACTGTAATGTTCCAAAAGATGGTGGCCAGTGATGGTATTTTAAAAGTAACCGACATATCAGTGAAGGAAGAGTGCAAAGCCCGCCCGCCTGGCCTTAATACAGTTAATTTGCTTAAGGTTGCATCAAGTGCACTAGGTATTGGACCTCAGACAGCAATGCACTTGGCAGAGAGGCTTTATACCCAAGGATTCATCAGTTATCCACGTACAGAGAGCACTGCCTATCCTTCATCATTTGATTTTAGGAGTGCACTCGCTGCACTTGCACATAATCCTTTGTGGTCCAATGATGTTCGGACGTTACTGGACACTGGGTTTGTTAAGCCCAAACAGGGTCATGATGCTGGGGACCATCCCCCAATAACTCCAATGAGATTGGCAACAGAAGAAGCTTTGGGAACTGATGCTTGGAGGCTGTACCAGTACATTTGTCAGCATTTTATTGGCACTGTCAGTCCTGATTGTAGATATACGAGGACTTCCATTGAGTTCACTTCAGGTGGAGAGACTTTCCACTGTGTTGGCAACCGGGTCACTTCTAAAGGATTTACTTCTATTATGCCATGGCTGGCTGTGAGTGAGAATAATATCCCTGCATATAAAAAGGGCGATGCTGTTAGCATCCATAAGGTTGACATATATGAGGGTAGCACCACACCTCCTGACTACCTTAGTGAGAGTGAATTGATCTCTCTCATGGAGAAGAATGGCATAGGTACAGATGCATCAATTCCTGTGCATGTAAACAACATCTGCGAGCGTAATTATGTTCAGGTGAATTCCGGAAGAAGATTAGTACCAACACCCCTGGGAACTACATTGATAAGAGGGTATCAGTGCATTGATGCTGATCTGTGCTTACCAGATATCCGAAGGTTTATTGAGCAGCAGATTACTCTAATTGCAAAAGGTGAAGCTGACCATCTTCAAGTTGTGCAGCATGTTCTTCAGCAGTTTATGAAAAAGTACTCGTACTTTGTGAAAAAGATTGAAAACATGGATGCTTTGTTCGAAGCACAGTTTTCACCTTTGGCTGACTCTGGACGTTTACTGAGCAAGTGTGGAAAATGTGCTCGGTATATGAAGTACATTTCCACTCAGCCAATGAGGCTGTACTGTGTAACTTGTGAAGAGGTCTACTATCTTCCCCAGAACGGTTCCATTAAGCTTTACAAGGAAATCATTTGCCCCCTTGATGGGTTTGAGTTGCTACTGTTTTCAATGGTTGGCCCTGATGCAAAATCCTTCCCACTGTGTCCTTTTTGCTACAACAGTCCTCCATTTGAAGGCATCGACAAACTCTTCGGTGCACTCAAGCTTGATGACACTGGCAAGGTTGGGAAAGGGGCTGGCATGCCATGCTTCCTCTGCCTGCACCCCACATGTAAACAATCTATGATCACTCAAGGAGTTTGTGCTTGTCCTGAGTGTACTGGTACCCTAATTCTTGATCCAGTCAGCGCACCCAAATGGCGGCTTTACTGCAATAGATGTAACTGCATTGTCCTGCTCCCACATGCCGCTCATAAGATCAGTACTACAGATAAGAAGTGCCCAACATGTGAGTCTACTATCATCGAAGTTGATTTTAACAAGAAAACTACCCCACTTAAGGATGGAGCTACTTTGCATGAGGGTTGCATCTTGTGCGATGAGCTGTTGCATTCGCTCATTGAGATGAAGCATGGGAAGTCATTTTTTATGAGGAGAGGTAGAGGAAGAGGCAGGGGTAGAGGTCGAGGGAGAGGAAGCAGTAGGGGAAGACGGGGGAGCTCAAGACACGATGATCCTAAGATGAGCTTCAGAGATTTCTGAAAGTTTCAGGGCTTAAACCTATATGTAAGTACATGCAACACTAGTTAGAAACTTAACCACCACTGTTGTTCTTTCCATTTTCTTCCTGTATAAACCCTAGATCAAGTTATCTTTCATGGTTTTGCTACCATGCTAAGACTGTTATTTCTGTTTCTATTGGATGAAGTTAGGCTTGTTTCCCAGGTTGAAGAATGGCTGTGTAGCATCGATCTTATGTAAACAGTGGTTGGTAAATGGTAACAGGGCCAACGGTTGCAAGGGTTGGTGAGATACTGACAATTGAGAACTTCTGGGTCGTAATGCGTTTACCAACGACACAACACGAGGCAA]
[+] EMBL CB635375             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATTGATCTCTCTCATGGAGAAGAATGGCATAGGTACAGATGCATCAATTCCTGTGCATGTAAACAACATCTGCGAGCGTAATTATGTTCAGGTGAATTCCGGAAGAAGATTAGTACCAACACCCCTGGGAACTACATTGATAAGAGGGTATCAGTGCATTGATGCTGATCTGTGCTTACCAGATATCCGAAGGTTTATTGAGCAGCAGATTACTCTAATTGCAAAAGGTGAAGCTGACCATCTTCAAGTTGTGCAGCATGTTCTTCAGCAGTTTATGAAAAAGTACTCGTACTTTGTGAAAAAGATTGAAAACATGGATGCTTTGTTCGAAGCACAGTTTTCACCTTTGGCTGACTCTGGACGTTTACTGAGCAAGTGTGGAAAATGTGCTCGGTATATGAAGTACATTTCCACTCAGCCAATGAGGCTGTACTGTGTAACTTGTGAAGAGGTCTACTATCTTCCCCAGAACGGTTCCATTAAGCTTTACAAGGAAATCATTTGCCCCCTTGATGGGTTTGAGTTGCTACTGTTCTCAATGGTTGGCCCTGATGCAAAATCCTTCCCACTGTGTCCTTTTTGCTACAACAGTCCTCCATTTGAAGGCATCGACAAACTCTTCGGTGCACTCAAGCTTGATGACACTGGCAAGGTTGGGAAAGGGGCTGGCATGCCATGCTTCCTCTGCCTGCACCCCACATGTAAACAATCTATGATCACTCAAGGAGTTTGTGCTTGTCCTGAGTGTACTGGTACCCTAATTCTTGATCCAGTCAGCGCACCCAAATGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]




>consensus_6254#0
GGGGGGGGGCCAAAACCCAGCCCACTAAAACCACACTCCGATCCGAAACCGTCTTCGTCT
TCGTCTCCGGCCGCCTCTCCGCCTCCACTCTTCCTCCTCCCGGCGGCGAGCTTCCCCTCT
CCGCCCGCGCCCATGGCGCCCACGGTTCTGATGGTCGCGGAGAAGCCCAGCATCGCGCTC
TCCATCGCCTCCGCCCTCTCCGGCGGCCGCATGTCTACAAGGAAGGGAAGTACAGATGTC
CATGAGTTTGATGGGATGTTTCAGGGTTCTCATGCATTTTTCAAAGTGACATCAGTCATT
GGACATGTCTTGAGTGTAGATTTTCCACCTGCATATCAGAATTGGGAAGGGACTGATCCG
ATGGATCTATTTGTGGCTCCAGTTCTGCGATCTGAATGCAACCCTAAGGCTCATATCCGC
AGGCATCTAGCTCAGGAAGCTCGAGGCTGCACCTACTTGGTACTCTGGCTTGATTGTGAC
CGAGAAGGAGAAAACATATGCTATGAAGTAATTGATTGCACTGGAATTCCTAAAAGTGAG
GTTGGCAGAAGAATTTTCCGAGCCAAATTTTCGTCCGTTACTGAGAAAGATATAATGGAT
GCTATGAATAATCTTGTTTTGCCAAGTAAAGATGAGGCACTAGCAGTTGATGCTCGCCAA
GAAATTGACTTGAAGGTAGGAGTAGCATTTACTCGATTTCAAACCAGATATTTTCAAGGA
AAATATGGAAATCTCGACTCAAGAGTAATTTCGTATGGTCCATGCCAAACACCTACACTT
GGATTCTGTGTACAACGCTATCAGCAGATTACCACATTCAAACCAGAGAAATTTTGGTCC
TTGAAAACTTATGTTATCAAGGATGGTAATGAAATTCAGCTTGAATGGGATAGGAAGAAA
CTTTTTGATTTTGATGTTACTGTAATGTTCCAAAAGATGGTGGCCAGTGATGGTATTTTA
AAAGTAACCGACATATCAGTGAAGGAAGAGTGCAAAGCCCGCCCGCCTGGCCTTAATACA
GTTAATTTGCTTAAGGTTGCATCAAGTGCACTAGGTATTGGACCTCAGACAGCAATGCAC
TTGGCAGAGAGGCTTTATACCCAAGGATTCATCAGTTATCCACGTACAGAGAGCACTGCC
TATCCTTCATCATTTGATTTTAGGAGTGCACTCGCTGCACTTGCACATAATCCTTTGTGG
TCCAATGATGTTCGGACGTTACTGGACACTGGGTTTGTTAAGCCCAAACAGGGTCATGAT
GCTGGGGACCATCCCCCAATAACTCCAATGAGATTGGCAACAGAAGAAGCTTTGGGAACT
GATGCTTGGAGGCTGTACCAGTACATTTGTCAGCATTTTATTGGCACTGTCAGTCCTGAT
TGTAGATATACGAGGACTTCCATTGAGTTCACTTCAGGTGGAGAGACTTTCCACTGTGTT
GGCAACCGGGTCACTTCTAAAGGATTTACTTCTATTATGCCATGGCTGGCTGTGAGTGAG
AATAATATCCCTGCATATAAAAAGGGCGATGCTGTTAGCATCCATAAGGTTGACATATAT
GAGGGTAGCACCACACCTCCTGACTACCTTAGTGAGAGTGAATTGATCTCTCTCATGGAG
AAGAATGGCATAGGTACAGATGCATCAATTCCTGTGCATGTAAACAACATCTGCGAGCGT
AATTATGTTCAGGTGAATTCCGGAAGAAGATTAGTACCAACACCCCTGGGAACTACATTG
ATAAGAGGGTATCAGTGCATTGATGCTGATCTGTGCTTACCAGATATCCGAAGGTTTATT
GAGCAGCAGATTACTCTAATTGCAAAAGGTGAAGCTGACCATCTTCAAGTTGTGCAGCAT
GTTCTTCAGCAGTTTATGAAAAAGTACTCGTACTTTGTGAAAAAGATTGAAAACATGGAT
GCTTTGTTCGAAGCACAGTTTTCACCTTTGGCTGACTCTGGACGTTTACTGAGCAAGTGT
GGAAAATGTGCTCGGTATATGAAGTACATTTCCACTCAGCCAATGAGGCTGTACTGTGTA
ACTTGTGAAGAGGTCTACTATCTTCCCCAGAACGGTTCCATTAAGCTTTACAAGGAAATC
ATTTGCCCCCTTGATGGGTTTGAGTTGCTACTGTTTTCAATGGTTGGCCCTGATGCAAAA
TCCTTCCCACTGTGTCCTTTTTGCTACAACAGTCCTCCATTTGAAGGCATCGACAAACTC
TTCGGTGCACTCAAGCTTGATGACACTGGCAAGGTTGGGAAAGGGGCTGGCATGCCATGC
TTCCTCTGCCTGCACCCCACATGTAAACAATCTATGATCACTCAAGGAGTTTGTGCTTGT
CCTGAGTGTACTGGTACCCTAATTCTTGATCCAGTCAGCGCACCCAAATGGCGGCTTTAC
TGCAATAGATGTAACTGCATTGTCCTGCTCCCACATGCCGCTCATAAGATCAGTACTACA
GATAAGAAGTGCCCAACATGTGAGTCTACTATCATCGAAGTTGATTTTAACAAGAAAACT
ACCCCACTTAAGGATGGAGCTACTTTGCATGAGGGTTGCATCTTGTGCGATGAGCTGTTG
CATTCGCTCATTGAGATGAAGCATGGGAAGTCATTTTTTATGAGGAGAGGTAGAGGAAGA
GGCAGGGGTAGAGGTCGAGGGAGAGGAAGCAGTAGGGGAAGACGGGGGAGCTCAAGACAC
GATGATCCTAAGATGAGCTTCAGAGATTTCTGAAAGTTTCAGGGCTTAAACCTATATGTA
AGTACATGCAACACTAGTTAGAAACTTAACCACCACTGTTGTTCTTTCCATTTTCTTCCT
GTATAAACCCTAGATCAAGTTATCTTTCATGGTTTTGCTACCATGCTAAGACTGTTATTT
CTGTTTCTATTGGATGAAGTTAGGCTTGTTTCCCAGGTTGAAGAATGGCTGTGTAGCATC
GATCTTATGTAAACAGTGGTTGGTAAATGGTAACAGGGCCAACGGTTGCAAGGGTTGGTG
AGATACTGACAATTGAGAACTTCTGGGTCGTAATGCGTTTACCAACGACACAACACGAGG
CAA

consensusID : consensus_6254#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 581
fasta sequence 
                              [TTTGATTTTGATGTAAGATTCTTGAGTTTATAACCAAATGATTTCATTCTATTCTTTCTAACATTTATCATTTCATCAATCAATTTTGCAGGTTACTGTAATGTTCCAAAAGATGGTGGCCAGTGATGGTATTTTAAAAGTAACCGACATATCAGTGAAGGAAGAGTGCAAAGCCCGCCCGCCTGGCCTTAATACAGTTAATTTGCTTAAGGTTGCATCAAGTGCACTAGGTATTGGACCTCAGACAGCAATGCACTTGGCAGAAAGGCTTTATACCCAAGGATTCATCAGTTATCCACGTACAGAGAGCACTGCCTATCCTTCATCATTTGATTTTAGAAGTGCACTCGCTGCACTTGCACATAATCCTTTGTGGTCCAATGATGTTCGGACGTTACTGGACACTGGGTTTGTTAAGCCCAAACAGGGTCATGATGCTGGGGACCATCCCCCAATAACTCCAATGAGATTGGCAACAGAAGAAGCTTTGGGAACTGATGCTTGGAGGCTGTACCAGTACATTTGTCAGCATTTTATTGGCACTGTCAGTCCTGATTGTAGATATACGAGGACTTCCATTG]

[+] EMBL CF322809             [TTTGATTTTGATGTAAGATTCTTGAGTTTATAACCAAATGATTTCATTCTATTCTTTCTAACATTTATCATTTCATCAATCAATTTTGCAGGTTACTGTAATGTTCCAAAAGATGGTGGCCAGTGATGGTATTTTAAAAGTAACCGACATATCAGTGAAGGAAGAGTGCAAAGCCCGCCCGCCTGGCCTTAATACAGTTAATTTGCTTAAGGTTGCATCAAGTGCACTAGGTATTGGACCTCAGACAGCAATGCACTTGGCAGAAAGGCTTTATACCCAAGGATTCATCAGTTATCCACGTACAGAGAGCACTGCCTATCCTTCATCATTTGATTTTAGAAGTGCACTCGCTGCACTTGCACATAATCCTTTGTGGTCCAATGATGTTCGGACGTTACTGGACACTGGGTTTGTTAAGCCCAAACAGGGTCATGATGCTGGGGACCATCCCCCAATAACTCCAATGAGATTGGCAACAGAAGAAGCTTTGGGAACTGATGCTTGGAGGCTGTACCAGTACATTTGTCAGCATTTTATTGGCACTGTCAGTCCTGATTGTAGATATACGAGGACTTCCATTG]
[+] EMBL CF306918             [                                                                                       tgatGTTACTGTAATGTTCCAAAAGATGGTGGCCAGTGATGGTATTTTAAAAGTAACCGACATATCAGTGAAGGAAGAGTGCAAAGCCCGCCCGCCTGGCCTTAATACAGTTAATTTGCTTAAGGTTGCATCAAGTGCACTAGGTATTGGACCTCAGACAGCAATGCACTTGGCAGAAAGGCTTTATACCCAAGGATTCATCAGTTATCCACGTACAGAGAGCACTGCCTATCCTTCATCATTTGATTTTAGAAGTGCACTCGCTGCACTTGCACATAATCCTTTGTGGTCCAATGATGTTCGGACGTTACTGGACACTGGGTTTGTTAAGCCCAAACAGGGTCATGATGCTGGGGACCATCCCCCAATAACTCCAATGAGATTGGCAACAGAAGAAGCTTTGGGAACTGATGCTTGGAGGCTGTACCAGTACATTTGTCAGCATTTTATTGGCACTGTCAGTCCTGATTGT                      ]




>consensus_6254#1
TTTGATTTTGATGTAAGATTCTTGAGTTTATAACCAAATGATTTCATTCTATTCTTTCTA
ACATTTATCATTTCATCAATCAATTTTGCAGGTTACTGTAATGTTCCAAAAGATGGTGGC
CAGTGATGGTATTTTAAAAGTAACCGACATATCAGTGAAGGAAGAGTGCAAAGCCCGCCC
GCCTGGCCTTAATACAGTTAATTTGCTTAAGGTTGCATCAAGTGCACTAGGTATTGGACC
TCAGACAGCAATGCACTTGGCAGAAAGGCTTTATACCCAAGGATTCATCAGTTATCCACG
TACAGAGAGCACTGCCTATCCTTCATCATTTGATTTTAGAAGTGCACTCGCTGCACTTGC
ACATAATCCTTTGTGGTCCAATGATGTTCGGACGTTACTGGACACTGGGTTTGTTAAGCC
CAAACAGGGTCATGATGCTGGGGACCATCCCCCAATAACTCCAATGAGATTGGCAACAGA
AGAAGCTTTGGGAACTGATGCTTGGAGGCTGTACCAGTACATTTGTCAGCATTTTATTGG
CACTGTCAGTCCTGATTGTAGATATACGAGGACTTCCATTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6254#0      GGGGGGGGGCCAAAACCCAGCCCACTAAAACCACACTCCGATCCGAAACCGTCTTCGTCT 60
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      TCGTCTCCGGCCGCCTCTCCGCCTCCACTCTTCCTCCTCCCGGCGGCGAGCTTCCCCTCT 120
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      CCGCCCGCGCCCATGGCGCCCACGGTTCTGATGGTCGCGGAGAAGCCCAGCATCGCGCTC 180
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      TCCATCGCCTCCGCCCTCTCCGGCGGCCGCATGTCTACAAGGAAGGGAAGTACAGATGTC 240
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      CATGAGTTTGATGGGATGTTTCAGGGTTCTCATGCATTTTTCAAAGTGACATCAGTCATT 300
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      GGACATGTCTTGAGTGTAGATTTTCCACCTGCATATCAGAATTGGGAAGGGACTGATCCG 360
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      ATGGATCTATTTGTGGCTCCAGTTCTGCGATCTGAATGCAACCCTAAGGCTCATATCCGC 420
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      AGGCATCTAGCTCAGGAAGCTCGAGGCTGCACCTACTTGGTACTCTGGCTTGATTGTGAC 480
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      CGAGAAGGAGAAAACATATGCTATGAAGTAATTGATTGCACTGGAATTCCTAAAAGTGAG 540
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      GTTGGCAGAAGAATTTTCCGAGCCAAATTTTCGTCCGTTACTGAGAAAGATATAATGGAT 600
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      GCTATGAATAATCTTGTTTTGCCAAGTAAAGATGAGGCACTAGCAGTTGATGCTCGCCAA 660
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      GAAATTGACTTGAAGGTAGGAGTAGCATTTACTCGATTTCAAACCAGATATTTTCAAGGA 720
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      AAATATGGAAATCTCGACTCAAGAGTAATTTCGTATGGTCCATGCCAAACACCTACACTT 780
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      GGATTCTGTGTACAACGCTATCAGCAGATTACCACATTCAAACCAGAGAAATTTTGGTCC 840
consensus_6254#1      ------------------------------------TTTGATTTTGATGTAA---GATTC 21
                                                          **  *    **   *    * * *

consensus_6254#0      TTGAAAACTTATGTTATCAAGGATGGTAATGAAATTCAGCTTGAATGGGATAGGAAGAAA 900
consensus_6254#1      TTGAG----TTTATAACCAAATGATTTCATTCTATTCTTTCTAAC--ATTTATCATTTCA 75
                      ****     * * * * ***      * **   ****    * *      **  *    *

consensus_6254#0      CTTTTTGATTTTG-ATGTTACTGTAATGTTCCAAAAGATGGTGGCCAGTGATGGTATTTT 959
consensus_6254#1      TCAATCAATTTTGCAGGTTACTGTAATGTTCCAAAAGATGGTGGCCAGTGATGGTATTTT 135
                          *  ****** * ********************************************

consensus_6254#0      AAAAGTAACCGACATATCAGTGAAGGAAGAGTGCAAAGCCCGCCCGCCTGGCCTTAATAC 1019
consensus_6254#1      AAAAGTAACCGACATATCAGTGAAGGAAGAGTGCAAAGCCCGCCCGCCTGGCCTTAATAC 195
                      ************************************************************

consensus_6254#0      AGTTAATTTGCTTAAGGTTGCATCAAGTGCACTAGGTATTGGACCTCAGACAGCAATGCA 1079
consensus_6254#1      AGTTAATTTGCTTAAGGTTGCATCAAGTGCACTAGGTATTGGACCTCAGACAGCAATGCA 255
                      ************************************************************

consensus_6254#0      CTTGGCAGAGAGGCTTTATACCCAAGGATTCATCAGTTATCCACGTACAGAGAGCACTGC 1139
consensus_6254#1      CTTGGCAGAAAGGCTTTATACCCAAGGATTCATCAGTTATCCACGTACAGAGAGCACTGC 315
                      ********* **************************************************

consensus_6254#0      CTATCCTTCATCATTTGATTTTAGGAGTGCACTCGCTGCACTTGCACATAATCCTTTGTG 1199
consensus_6254#1      CTATCCTTCATCATTTGATTTTAGAAGTGCACTCGCTGCACTTGCACATAATCCTTTGTG 375
                      ************************ ***********************************

consensus_6254#0      GTCCAATGATGTTCGGACGTTACTGGACACTGGGTTTGTTAAGCCCAAACAGGGTCATGA 1259
consensus_6254#1      GTCCAATGATGTTCGGACGTTACTGGACACTGGGTTTGTTAAGCCCAAACAGGGTCATGA 435
                      ************************************************************

consensus_6254#0      TGCTGGGGACCATCCCCCAATAACTCCAATGAGATTGGCAACAGAAGAAGCTTTGGGAAC 1319
consensus_6254#1      TGCTGGGGACCATCCCCCAATAACTCCAATGAGATTGGCAACAGAAGAAGCTTTGGGAAC 495
                      ************************************************************

consensus_6254#0      TGATGCTTGGAGGCTGTACCAGTACATTTGTCAGCATTTTATTGGCACTGTCAGTCCTGA 1379
consensus_6254#1      TGATGCTTGGAGGCTGTACCAGTACATTTGTCAGCATTTTATTGGCACTGTCAGTCCTGA 555
                      ************************************************************

consensus_6254#0      TTGTAGATATACGAGGACTTCCATTGAGTTCACTTCAGGTGGAGAGACTTTCCACTGTGT 1439
consensus_6254#1      TTGTAGATATACGAGGACTTCCATTG---------------------------------- 581
                      **************************                                  

consensus_6254#0      TGGCAACCGGGTCACTTCTAAAGGATTTACTTCTATTATGCCATGGCTGGCTGTGAGTGA 1499
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      GAATAATATCCCTGCATATAAAAAGGGCGATGCTGTTAGCATCCATAAGGTTGACATATA 1559
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      TGAGGGTAGCACCACACCTCCTGACTACCTTAGTGAGAGTGAATTGATCTCTCTCATGGA 1619
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      GAAGAATGGCATAGGTACAGATGCATCAATTCCTGTGCATGTAAACAACATCTGCGAGCG 1679
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      TAATTATGTTCAGGTGAATTCCGGAAGAAGATTAGTACCAACACCCCTGGGAACTACATT 1739
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      GATAAGAGGGTATCAGTGCATTGATGCTGATCTGTGCTTACCAGATATCCGAAGGTTTAT 1799
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      TGAGCAGCAGATTACTCTAATTGCAAAAGGTGAAGCTGACCATCTTCAAGTTGTGCAGCA 1859
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      TGTTCTTCAGCAGTTTATGAAAAAGTACTCGTACTTTGTGAAAAAGATTGAAAACATGGA 1919
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      TGCTTTGTTCGAAGCACAGTTTTCACCTTTGGCTGACTCTGGACGTTTACTGAGCAAGTG 1979
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      TGGAAAATGTGCTCGGTATATGAAGTACATTTCCACTCAGCCAATGAGGCTGTACTGTGT 2039
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      AACTTGTGAAGAGGTCTACTATCTTCCCCAGAACGGTTCCATTAAGCTTTACAAGGAAAT 2099
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      CATTTGCCCCCTTGATGGGTTTGAGTTGCTACTGTTTTCAATGGTTGGCCCTGATGCAAA 2159
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      ATCCTTCCCACTGTGTCCTTTTTGCTACAACAGTCCTCCATTTGAAGGCATCGACAAACT 2219
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      CTTCGGTGCACTCAAGCTTGATGACACTGGCAAGGTTGGGAAAGGGGCTGGCATGCCATG 2279
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      CTTCCTCTGCCTGCACCCCACATGTAAACAATCTATGATCACTCAAGGAGTTTGTGCTTG 2339
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      TCCTGAGTGTACTGGTACCCTAATTCTTGATCCAGTCAGCGCACCCAAATGGCGGCTTTA 2399
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      CTGCAATAGATGTAACTGCATTGTCCTGCTCCCACATGCCGCTCATAAGATCAGTACTAC 2459
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      AGATAAGAAGTGCCCAACATGTGAGTCTACTATCATCGAAGTTGATTTTAACAAGAAAAC 2519
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      TACCCCACTTAAGGATGGAGCTACTTTGCATGAGGGTTGCATCTTGTGCGATGAGCTGTT 2579
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      GCATTCGCTCATTGAGATGAAGCATGGGAAGTCATTTTTTATGAGGAGAGGTAGAGGAAG 2639
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      AGGCAGGGGTAGAGGTCGAGGGAGAGGAAGCAGTAGGGGAAGACGGGGGAGCTCAAGACA 2699
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      CGATGATCCTAAGATGAGCTTCAGAGATTTCTGAAAGTTTCAGGGCTTAAACCTATATGT 2759
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      AAGTACATGCAACACTAGTTAGAAACTTAACCACCACTGTTGTTCTTTCCATTTTCTTCC 2819
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      TGTATAAACCCTAGATCAAGTTATCTTTCATGGTTTTGCTACCATGCTAAGACTGTTATT 2879
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      TCTGTTTCTATTGGATGAAGTTAGGCTTGTTTCCCAGGTTGAAGAATGGCTGTGTAGCAT 2939
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      CGATCTTATGTAAACAGTGGTTGGTAAATGGTAACAGGGCCAACGGTTGCAAGGGTTGGT 2999
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      GAGATACTGACAATTGAGAACTTCTGGGTCGTAATGCGTTTACCAACGACACAACACGAG 3059
consensus_6254#1      ------------------------------------------------------------
                                                                                  

consensus_6254#0      GCAA 3063
consensus_6254#1      ----


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)