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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6256 cluster # 6256       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6256#0 length = 597 sequences # 4  

consensusID : consensus_6256#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 597
fasta sequence
                              [CATGA-CCATG-CCTGCAGATGCAGGGGCACAGAGCAATGGCTTCGAGAACGCTGCCTCACCCATCATCCATGTCCAGCCGAAGGAGCTTGCATTGGCATCCACCACGCAGACGCCTCTTGGATCAAATCGGCCAGTTGAGATGATGGCGAAGGGGCCTAGATCAGGCACGGTTCCCTTTCGTCAGAACGCTGGAGCTGGTCTCTTGGGTGCATGCCCTGTGGCTACGGTCACGTCCTCTACGCCAGATCAGAGCACACCGGTTAGCCATTCTGGAGCTTCAATTTCCACACCCCGGACTGCTCAGAGATTGGCTAAATCAGGAGCACAAGGATGAAGAGAAATATGCCTTTTCTCTCTAAAACAAGGATGAAAAAAGAAATATCGAAGATGACTCCTCCAAA-TTCTGAAGTTGTTTTCTTTCTATCAAATGAGA-GGATTACCTGCAAGATAATCTCCTGCTGATCGAATTGTGCTTCAACTTTGATGTAATCTCTGTTTGTTTATAGGCAGAGCTCATATATTGCAGGTAACACCTGTCCCGCCTTTATAGTGGGGACTGCGAGTAGCTAACATGGAAGAAGATTTTGGTTTAAAAAA]

[+] EMBL AU092783             [CATGA CCATG CCTGCAGATGCAGGGGCACAGAGCAATGGCTTCGAGAACGCTGCCTCACCCATCATCCATGTCCAGCCGAAGGAGCTTGCATTGGCATCCACCACGCAGACGCCTCTTGGATCAAATCGGCCAGTTGAGATGATGGCGAAGGGGCCTAGATCAGGCACGGTTCCCTTTCGTCAGAACGCTGGAGCTGGTCTCTTGGGTGCATGCCCTGTGGCTACGGTCACGTCCTCTACGCCAGATCAGAGCACACCGGTTAGCCATTCTGGAGCTTCAATTTCCACACCCCGGACTGCTCAGAGATTGGCTAAATCAGGAGCACAAGGATGAAGAGAAATATGCCTTTTCTCTCTAAAACAAGGATGAAAAAAGAAATATCGAAGATGACTCCTCCNAA TTCTGAAGTTGTTTTCTTTCTATCAAATGAGA GGATTACCTGCAAGATAATCTCCTGCTGATCGAATTGTGCTTCAACTTTGATGTAATCTCTGTTTGTTTATAGGCAGAGCTCATATATTGCAGGTAACACCTGTCCCGCCTTTATAGTGGGGACTGCGAGTAGCTAACATGGAAGAAGATTTTGGTTTAAAAAA]
[+] EMBL AU063193             [CATGA CCATG CCTGCAGATGCAGNNGCACAGAGCAATGGCTTCGAGAACGCTGCCTCACCCATCATCCATGTCCAGCCGAA GAGCTTGCATTGGCATCCACCACGCAGACGCCTCTTGGATCANATCGGCCAGTTGAGATGATGGCGAAGGGGCCTAGATCAGGCACGGTTCCCTTTCGTCAGAACGCTGGAGCTGGTCTCTTGGGTGCATGCCCTGTGGCTACGGTCACGTCCTCTACGCCAGATCAGAGCACACCGGTTAGCCATTCTGGAGCTTCAATTTCCACACCCCGGACTGCTCAGAGATTGGCTAAATCAGGAGCACAAGGATGAAGAGAAATATGCCTTTTCTCTCTAAAACAAGGATGAAAAAAGAAATATCG AGNTGACTTCTCCAAA TTCTGAAGTTGTTTTCTTTCTATCAAATGAGA GGA TACCTGCAAGATAATCT CTGCTTATCG ATTGTGCTT NACTTTGATGTAATCTCTGTTTGT                                                                                                 ]
[+] EMBL AU063203             [CATGA CCATG CCTGCAGATGCAGGNGCACAGAGCAATGGCTTCGAGAACGCTGCCTCACCCATCATCCATGTCCAGCCGAA GAGCTTGCATTGGCATCCACCACGCAGACGCCTCTTGGATCAAATCGGCCAGTTGAGATGATGGCGAAGGGGCCTAGATCAGGCACGGTTCCCTTTCGTCAGAACGCTGGAGCTGGTCTCTTGGGTGCATGCCCTGTGGCTACGGTCACGTCCTCTACGCCAGATCAGAGCACACCGGTTAGCCATTCTGGAGCTTCAATTTCCACACCCCGGACTGCTCAGAGATTGGCTAAATCAGGAGCACAAGGATGAAGAGAAATATGCCTTTTCTCTCTAAAACAAGGATGAAAAAAGAAATATCGAAGATGACTTCTCCAAATTTTTGAAGTTGTTTTCTTTCTATCAAATGAGAGGGATTA                                                                                                                                                              ]
[+] EMBL AU100906             [ ATGACCCATGCCCTGCAGATGCAGGGGCACAGAGCAATGGCTTCGAGAACGCTGCCTCACCCATCATCCATGTCCAGCCGAAGGAGCTTGCATTGGCATCCACCACGCAGACGCCTCTTGGATCAAATCGGCCAGTTGAGATGATGGCGAAGGGGCCTAGATCAGGCACGGTTCCCTTTCGTCAGAACGCTGGAGCTGGTCTCTTGGGTGCATGCCCTGTGGCTACGGTCACGTCCTCTACGCCAGATCAGAGCACACCGGTTAGCCATTCTGGAGCTTCAATTTCCACACCCCGGACTGCTCAGAGATTGGCTAAATCAGGAGCACAAGGATGAAGAGAAATATGCCTTTTCTCTCTAAAACAAGGATGAAAAAAGAAATATCGAAGATGACTCCTCCAAA TTCTGAAGTTGTTTTCTTTCTATCAAATGAGA GGATTACCTGCAAGATAATCTCCTGCTGATCGAATTGTGCTTCAACTTTGATGTAATCTCTGTTTGTTTATAGGCAGAGCTCATATATTGCAGGTAACACCTGTCCCGCCTTTATAGTGGGGACTGCGAGTAGCTAACATGGAAGAAGATTTTGGTTTAAAAAA]


>consensus_6256#0 CATGACCATGCCTGCAGATGCAGGGGCACAGAGCAATGGCTTCGAGAACGCTGCCTCACC CATCATCCATGTCCAGCCGAAGGAGCTTGCATTGGCATCCACCACGCAGACGCCTCTTGG ATCAAATCGGCCAGTTGAGATGATGGCGAAGGGGCCTAGATCAGGCACGGTTCCCTTTCG TCAGAACGCTGGAGCTGGTCTCTTGGGTGCATGCCCTGTGGCTACGGTCACGTCCTCTAC GCCAGATCAGAGCACACCGGTTAGCCATTCTGGAGCTTCAATTTCCACACCCCGGACTGC TCAGAGATTGGCTAAATCAGGAGCACAAGGATGAAGAGAAATATGCCTTTTCTCTCTAAA ACAAGGATGAAAAAAGAAATATCGAAGATGACTCCTCCAAATTCTGAAGTTGTTTTCTTT CTATCAAATGAGAGGATTACCTGCAAGATAATCTCCTGCTGATCGAATTGTGCTTCAACT TTGATGTAATCTCTGTTTGTTTATAGGCAGAGCTCATATATTGCAGGTAACACCTGTCCC GCCTTTATAGTGGGGACTGCGAGTAGCTAACATGGAAGAAGATTTTGGTTTAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)