These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6277#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2292 fasta sequence [AGGCGAGAGCGGGAGCGCGGCCGCGCCCACCCTCCCTCCCTCCCTCCGCCTCCACCCCCATTCGATTCCCCCCCTTCCCTTCTCTTCTTCCCTCCCCAACCGCCACTCTCCCCCCCAAATCCCCCACCTCTCCTCGAGAATGGCGGAGTCGCAGGTGGAGGGGATGAGGAAGGCGTACGCGGAGATCATGCTGAACATGGCGCAGGAGTCGGCGGCGCGGGTGCTGGCGGCGGAGCGGCGGGCGGCGGCGCTCGCGGGGGGTTTGGCGGCGGCGAGGGAGGACGGCGTCGCCGCGCTCGTCAGGCTCAAGGCCATCATGGAGGCCAGGATAAAAGAAGCAGAGTCACAATCTTTGGCAAACATTAATAAGATTAAGGAACTACAAGAGCAATTACATGGTGCTCAAGATACAGTGGCCTCCCTTCAAATTGAACTGCAGAGATCAAATACTGAACTGGAGCAAGCAAGGAGCACTTTGGCTGAGGAAAGAAGAAATAACCTTCGCTCCTGCAATAAGATCAATTCTAATAAAAATAGCAGCTCTTCTTCTAGAAAGCATCTACAAGGCAGAGTATCCTCAAAGAGTAAAAATACGGCAAAGGAAAGTGGAGCTGTTGAAAACTTGGAGACACTGTACCGTTGTGATTCTGATCTGGGTTCATTCATGGCTAGAACTAAGAATCCTGAGCTGTATCGCAATGGGTGTACACAACGTATCCGTGCAATCAAGCAGCGAAGTCCAAATTCGGATACATCCCTGGTAGAAAACAGCAAGCAAACTAGTGCACTGAATAGCCGTTCTAAGACTGGAAAAACTGATACCAACAGAAACCCACAGAGCACAAGGTCCATCATGGAACAGATACTTCAAACAAAATTTCTGGCCAACTGCAAGAGAAAGAGAGGTAGGCGAAGCAGGCCAAGTTACATGCATGATAATTCTGGTGAGCATGGGCAAACAGAGTACAAGTCGTCTGATACATCTGATGGAAATGGGTGTTTGCTGCTACTTCAGGCTCTTGAACAAGATCTTTCACCTCTAAAGGCGTCTTCTGGAAGTGTTGGTGAGGGATTAGCTGACCAGAAGGATGAATTGCTCAAGGATGAAAAGGATGCTGACTTGAATCTTCACCCTGCTTCCCCTGGACCAAATGATGTACTTTCAGTAAACAACATGCAGATGAAAAGGAGGAAAAGGTCTAAGACTATGAGAGTCTTTGAATCTGATTTTGAGGCAAAAGCTGCCCCTGAATTTGGGAACACCCTGCCAAAATCAAGTAATAATAATAGCATGCTAAATAGTGAACAGAGCTCTGATCCACCTGCTGGAAACAATGGTCCTGTTTTGCAATGTACTGCTGAAAACTTGATGCACGTGACTGATGCTGCAAATGCTGATCAATTAAAGTCTGAGAACAGCTCCCCGCTAGTCCCTCAGTCAACAGAGAGTGAAATTGGAGATGAAGGTAACTCGCGAGTGGATCACAAAGAGTGTAGAACACCAGATAATAATGCAATAGTCTTGGAAGAAGTGAATGTGGATAAAAGCTGCATTATTTTAGCTTCAGATGGAGCTGATTCTTCGATAGTCAGCTCCCTGGACAAAGAAGAAAATGCAAAAGAAGCAACTTCTGGAGTTGCCGTGCAAGCTGAAGGTGCCAGATATATCAAATACACATTCAATCGCAGGAAACGCAAGGCCGCGCCTTTAGACAGCACTCCTCAAGGGGCTGTCCCTGAGAAAAGCAGTAGTGTGGTTTGCCCATCTGAGAATCATGAGCCTCATGCAAAGCCTGAGACGCAAGATCTCGTCATAGAGTCACCTCCAGGTGACAATCAACTAATCCATGTTGCCCAGCAGCTCATATTGCTGTCAGCGCAAAAATGATGAAAATTTTGTGATACATCAAAGCGGAAAGAGGGATTGGTTCGAAAGAATAATGCTTAAGGGACGGCTCCAATAAGTGGATCATGGATCGTTTGATAATATGCTAAATGCAGTTGAGTTCTTCAACGGAGGGGGAGAGACTTGTGGTGGTAGCGGCAGAGAAATCAAGAAAGCTAGCTTCATAGTGTAGTTATACCTCTACCTAAGAGGTGTTATTATAGTAGTGTATAAATTAGGCAGGAGTTACTATTTATTTTGTAGATGATAAATTTTGAACTATTGGTTTAAGAAGGTTATAAATTTTGAAGTGGTACTCAGTTATTAAGTCGGTTCAAATTCAGAGGTGAAACATCTGCTCATGTAAAGCAACTTACTTTTCTCTAGTTTTGGGGAAAATTTTGGTC] [+] EMBL AK073664 [AGGCGAGAGCGGGAGCGCGGCCGCGCCCACCCTCCCTCCCTCCCTCCGCCTCCACCCCCATTCGATTCCCCCCCTTCCCTTCTCTTCTTCCCTCCCCAACCGCCACTCTCCCCCCCAAATCCCCCACCTCTCCTCGAGAATGGCGGAGTCGCAGGTGGAGGGGATGAGGAAGGCGTACGCGGAGATCATGCTGAACATGGCGCAGGAGTCGGCGGCGCGGGTGCTGGCGGCGGAGCGGCGGGCGGCGGCGCTCGCGGGGGGTTTGGCGGCGGCGAGGGAGGACGGCGTCGCCGCGCTCGTCAGGCTCAAGGCCATCATGGAGGCCAGGATAAAAGAAGCAGAGTCACAATCTTTGGCAAACATTAATAAGATTAAGGAACTACAAGAGCAATTACATGGTGCTCAAGATACAGTGGCCTCCCTTCAAATTGAACTGCAGAGATCAAATACTGAACTGGAGCAAGCAAGGAGCACTTTGGCTGAGGAAAGAAGAAATAACCTTCGCTCCTGCAATAAGATCAATTCTAATAAAAATAGCAGCTCTTCTTCTAGAAAGCATCTACAAGGCAGAGTATCCTCAAAGAGTAAAAATACGGCAAAGGAAAGTGGAGCTGTTGAAAACTTGGAGACACTGTACCGTTGTGATTCTGATCTGGGTTCATTCATGGCTAGAACTAAGAATCCTGAGCTGTATCGCAATGGGTGTACACAACGTATCCGTGCAATCAAGCAGCGAAGTCCAAATTCGGATACATCCCTGGTAGAAAACAGCAAGCAAACTAGTGCACTGAATAGCCGTTCTAAGACTGGAAAAACTGATACCAACAGAAACCCACAGAGCACAAGGTCCATCATGGAACAGATACTTCAAACAAAATTTCTGGCCAACTGCAAGAGAAAGAGAGGTAGGCGAAGCAGGCCAAGTTACATGCATGATAATTCTGGTGAGCATGGGCAAACAGAGTACAAGTCGTCTGATACATCTGATGGAAATGGGTGTTTGCTGCTACTTCAGGCTCTTGAACAAGATCTTTCACCTCTAAAGGCGTCTTCTGGAAGTGTTGGTGAGGGATTAGCTGACCAGAAGGATGAATTGCTCAAGGATGAAAAGGATGCTGACTTGAATCTTCACCCTGCTTCCCCTGGACCAAATGATGTACTTTCAGTAAACAACATGCAGATGAAAAGGAGGAAAAGGTCTAAGACTATGAGAGTCTTTGAATCTGATTTTGAGGCAAAAGCTGCCCCTGAATTTGGGAACACCCTGCCAAAATCAAGTAATAATAATAGCATGCTAAATAGTGAACAGAGCTCTGATCCACCTGCTGGAAACAATGGTCCTGTTTTGCAATGTACTGCTGAAAACTTGATGCACGTGACTGATGCTGCGAATGCTGATCAATTAAAGTCTGAGAACAGCTCCCCGCTAGTCCCTCAGTCAACAGAGAGTGAAATTGGAGATGAAGGTAACTCGCGAGTGGATCACAAAGAGTGTAGAACACCAGATAATAATGCAATAGTCTTGGAAGAAGTGAATGTGGATAAAAGCTGCATTATTTTAGCTTCAGATGGAGCTGATTCTTCGATAGTCAGCTCCCTGGACAAAGAAGAAAATGCAAAAGAAGCAACTTCTGGAGTTGCCGTGCAAGCTGAAGGTGCCAGATATATCAAATACACATTCAATCGCAGGAAACGCAAGGCCGCGCCTTTAGACAGCACTCCTCAAGGGGCTGTCCCTGAGAAAAGCAGTAGTGTGGTTTGCCCATCTGAGAATCATGAGCCTCATGCAAAGCCTGAGACGCAAGATCTCGTCATAGAGTCACCTCCAGGTGACAATCAACTAATCCATGTTGCCCAGCAGCTCATATTGCTGTCAGCGCAAAAATGATGAAAATTTTGTGATACATCAAAGCGGAAAGAGGGATTGGTTCGAAAGAATAATGCTTAAGGGACGGCTCCAATAAGTGGATCATGGATCGTTTGATAATATGCTAAATGCAGTTGAGTTCTTCAACGGAGGGGGAGAGACTTGTGGTGGTAGCGGCAGAGAAATCAAGAAAGCTAGCTTCATAGTGTAGTTATACCTCTACCTAAGAGGTGTTATTATAGTAGTGTATAAATTAGGCAGGAGTTACTATTTATTTTGTAGATGATAAATTTTGAACTATTGGTTTAAGAAGGTTATAAATTTTGAAGTGGTACTCAGTTATTAAGTCGGTTCAAATTCAGAGGTGAAACATCTGCTCATGTAAAGCAACTTACTTTTCTCTAGTTTTGGGGAAAATTTTGGTC] [+] EMBL CB621379 [ AAATCTCTGGCCAACTGCAAGAGAAAGAGAGGTAGGCGAAGCAGGCCAAGTTACATGCATGATAATTCTGGTGAGCATGGGCAAACGGAGTACAAGTCGTCTGATACATCTGATGGAAATGGGTGTTTGCTGCTACTTCAGGCTCTTGAACAAGATCTTTCACCTCTAAAGGCGTCTTCTGGAAGTGTTGGTGAGGGATTAGCTGACCAGAAGGATGAATTGCTCAAGGATGAAAAGGATGCTGACTTGAATCTTCACCCTGCTTCCCCTGGACCAAATGATGTACTTTCAGTAAACAACATGCAGATGAAAAGGAGGAAAAGGTCTAAGACTATCAGAGTCTTTGAATCTGATTTTGAGGCAAAAGCTGCCCCTGAATTAGGGAACACCCTGCCAAAATCAAGTAATAATAATAGCATGCTAAATAGTGAACAGAGCTCTGATCCACCTGCTGGAAACAATGGTCCTGTTTTGCAATGTACTGCTGAAAACTTGATGCACGTGACTGATGCTGCAAATGCTGATCAATTAAAGTCTGAGAACAGCTCCCCGCTAGTCCCTCAGTCAACAGAGAGTGAAATTGGAGATGAAGGTAACTCGCGAGTGGATCACAAAGAGTGTAGAACACCAGATAATAATGCAATAGTCTTGGAAGAAGTGAATGTGGATAAAAGCTGCATTATTTTAGCTTCAGATGGAGCTGATTCTTCGATAGTCAGCTCTCTGGACAAAGAAGAAAATGCAAAAGAAGCAACTTCTGGAGTTGCCGTGCAAGCTGAAAGTGCCAGATATATCA ] [+] EMBL CF323494 [ CTTCACCCTGCTTCCCCTGGACCAAATGATGTACTTTCAGTAAACAACATGCAGATGAAAAGGAGGAAAAGGTCTAAGACTATGATAGTCTTTGAATCTGATTTTGAGGCAAAAGCTGCCCCTGAATTTGGGAACACCCTGCCAAAATCAAGTAATAATAATAGCATGCTAAATAGTGAACAGAGCTCTGATCCACCTGCTGGAAACAATGGTCCTGTTTTGCAATGTACTGCTGAAAACTTGATGCACGTGACTGATGCTGCAAATGCTGATCAATTAAAGTCTGAGAACAGCTCCCCGCTAGTCCCTCAGTCAACAGAGAGTGAAATTGGAGATGAAGGTAACTCGCGAGTGGATCACAAAGAGTGTAGAACACCAGATAATAATGCAATAGTCTTGGAAGAAGTGAATGTGGATAAAAGCTGCATTATTTTAGCTTCAGATGGAGCTGATTCTTCGATAGTCAGCTCCCTGGACAAAGAAGAAAATGCAAAAGAAGCAACTTCTGGAGTTGCC ] [+] EMBL BI813279 [ GCGGAAAGAGGGATTGGTTCGAAAGAATAATGCTTAAGGGACGGCTCCCATAAGTGGATCATGGATCGTGTGATAATATGCTAAATGCATGTGAGTTCTTCAACGGAGGGGGAGAGACTT T GTGGTA CGGCAGAGAAATCAAGAAAGCTAGCTTCATAGTGTAGTTATACCTCTACCTAAGAGGTGTTATTATAGTAGTGTATAAATTAGGCCGGAGTTACTATTTATTTTGTAGATGATAAATTTTGAACTATTGGTTTAAGAAGGTTATAAATTTTGAAGTGGTACTCAGTTATTAAGTCGGTTCCAATTCCGAGGTGAAAaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||