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Oryza sativa
cluster # 6286 cluster # 6286       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6286#0 length = 3028 sequences # 4  

consensusID : consensus_6286#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 3028
fasta sequence
                              [ATCAGTTTGCTTTGGGCGTGGTCTTCCTCGAGTCCCCCACATTTCTTCCTCCCCTCCGTACGGATACACACACTCTTTCTCTCTCGTGACTGATCCGACTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTCTGCTGCTGCTGCGGGGGGTGGGAGGAGATGAAGCCGAAGAGCCTCCCGTTCATCGCCTTCGAGCACAAGCGGGATGCCTATGGCTTCGCAGTTCGGCCCCAACACTTGCAGCGTTACAAGGAGTATGCAGGCATCTACAAGGAGGAGGAAGAGGAGAGATCCGATAGATGGAAGAATTTTCTGGAGAGGCAGTCAGAACCATCGGGACAGGAAGAGAAGGGTGAAGCTGCCGGGCGTGTTGTGGATAGCAGTGGAATTGGCGGTTCTTCGTTGCTGCAGGAGAAGATTGTGCAAGGACCACACAAGATCGAGATATGGAAGCCAATCAGACCATCCCTGGGCAACATAGAGCAGATCATGAGTGTACGTGTCGAGGAGAAGCAATCACCTGCTTCTGGCAATCAGGACACGAAGGATGTCATCCATCCGGTGAAGGTTCAAGAGGGCAAGTTATCTGAGGATTCAGATGATGAGTTCTATGATGTAGACAAGGTTGAGACTAGTCAAGAAATGCATTCAAGTGATAGTGCGAATACTGGCATTGACAACAGGGGTCAAGAGGAAAATTTTCCTTCGATGGAAGAGTTGGAGTGTCTAGTCCATGGTGGACTGCCAATGGCTTTGAGAGGAGAGCTATGGCAAGCTTTTGTTGGCATTGGAGTGCGTAGGGTAAAAGGGTACTATGATAGTCTCCTTGTGGCAGAAGGTGAACTAGAAGATACCAGTGGTTCGCGTTCTTCAACCTCGGATGTTGCCGGGGAAAATACTGAAGTATCTTCTGAAAAGTGGAAAGGGCAAATAGAGAAGGACTTGCCTAGAACTTTTCCAGGTCATCCTGCTTTAGACGAGGATGGAAGAAATGCTTTGAGACGTTTGCTTCTAGCTTATGCTAGACACAATCCAGCAGTTGGTTACTGCCAGGCAATGAACTTCTTTGCTGGTCTCTTACTTCTATTGATGCCAGAAGAGAATGCATTTTGGACATTGGTAGGAATTATCGACGACTATTTTGATGGATACTTTTCTGAAGAAATGATTGAGTCGCAGGTGGATCAGCTTGTTTTAGAGGAGTTGGTACGAGAAAAATTCCCAAAACTAGCAAATCACCTGGATTACCTTGGTCTTCAAGTTGCATGGGTTACTGGACCATGGTTCCTATCCATTTTCACCAATGTGCTTCCTTGGGAGAGTGTTCTCCGTGTCTGGGATGTCCTTCTGTTTGATGGGAATCGTGTGATGCTATTCCGGACAGCTCTTGCACTACTTGAGTTTTATGGTCCTGCACTTGTGACCACAAAAGATGCCGGTGATGCAGTTACACTTTTGCAGTCTTTAGCTGGCTCCACTTTTGACAGCAGCCAGCTTGTCTTGACAGCTCGCATGGGATATCAGTCTGTAGATGAAACAGGATTGCAAGAGTTAAGGAATAAGCATCGGCCATCTGTTCTATCTTCAATGGAAGAAAGAGCAAAAGGTCTAGGTGCCTTGGACACCAACGGTCTTGCATCAAAGCTCTATAATTTCAAACATGATCCTGAACCACTGGTGTCAATAAGTGATTCGCAAGATCAGATGAGTGATGTGGGAGATGGGAATGCCAACCAAAGTGATTCTGGAAATATGGATGATATGTATGGCGGTCTGACAGTCAGTTCTGAGATTGAAGCTTTACCGGACCCAAAGGACCAGATCTCTTGGCTGAAGTTTGAATTATGCCGATTGCTAGAGGAGAGAAGGTCAGCTGTTCTCAGAGCTGATGAACTAGAGACGGCATTGATGGAAATGGTCAAGCAAGATAATAGGCGGCAATTAAGTGCAAAGGTTGAGCAGTCGGAACAAGAATTGTCTGAACTAAGACAAACCCTATTGGATAAGCAGGAACAAGAGCAAGCAATGTGTCAGGTACTGTTGCGAGTGGAACAAGAACTGAAAATTGCAGAGGAAGCACGCATCTCTGCTGAGCAGGATGCCGCAGCTCAGAGATACGCTGTTAATGTGCTGCAGGAAAAGTATGAGGAAGCTATGGCTTCACTCGCGAAAATGGAGAACAGGGCTGTAATGGCAGAGACAATGTTGGAGGCCACACTGCAGTATCAAACTAGCCAGCAGAAAGCTCTTCTTTCCCCCTTGCCTTCTCCAAGAACATCCATGATAGACGCATCCCCTGGTCGAGCAAACCATGATTCATCACAGGAGTTCCAGCCCAAAAAAATAAACTTGCTCTCACCATTTTCACTGAGTTGGCGCGATAAGAACAAGGGAAAGCAGAACAATGTTGATGACAGTGCCAAGCTTACTGATGCACATGATCAAAGGGAAGAAATAACCAACAACAATGACGAGAAGCAGGTAGAAACACCAAAACTGGATGTGCTAGAAGAGTCTATGGGTTCACCCAAAGAAGATAACAAGTCGAGAGTAGAGGTGCCAAAGGAAGACAGCGATTTGGCAAGCGTCCAAGTAGTCGCAAATGATATGAATGGGCAGCATGAACAGTTGCAAGAAATAAAACTGGATTGAACAGTTGCAAGAAATCACAAACCAACCTTTTGCATATATCTTCACCACTATGGTATTCTTTTATCTGATCTTACCATGGTTGTCGAGAGAGTTAAACCTGGAGGGCTTCAAGGTTCGAACACGATCATTGCTGTACCTATTTTTTGCTCTGTCCCCTTCTTTTTAATTGTTTCC-TTTTTTTTTTTTATCATTGCCACTCTTGTGGGTCTATAGGTTACTTTTTCTCTCCATTATTACTCGAGAAGAGAAAAAAAGGGCGAAAGTTATCTGGTTGTCCATTAGTTAACTTTCGATGTAAATGCATCAGGGGAAATTACCAAATGTAGAAACACACTTTGCAATTATGGTATGCTTGTTTGTGAAAAAAAAA]

[+] EMBL AK065821             [ATCAGTTTGCTTTGGGCGTGGTCTTCCTCGAGTCCCCCACATTTCTTCCTCCCCTCCGTACGGATACACACACTCTTTCTCTCTCGTGACTGATCCGACTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTCTGCTGCTGCTGCGGGGGGTGGGAGGAGATGAAGCCGAAGAGCCTCCCGTTCATCGCCTTCGAGCACAAGCGGGATGCCTATGGCTTCGCAGTTCGGCCCCAACACTTGCAGCGTTACAAGGAGTATGCAGGCATCTACAAGGAGGAGGAAGAGGAGAGATCCGATAGATGGAAGAATTTTCTGGAGAGGCAGTCAGAACCATCGGGACAGGAAGAGAAGGGTGAAGCTGCCGGGCGTGTTGTGGATAGCAGTGGAATTGGCGGTTCTTCGTTGCTGCAGGAGAAGATTGTGCAAGGACCACACAAGATCGAGATATGGAAGCCAATCAGACCATCCCTGGGCAACATAGAGCAGATCATGAGTGTACGTGTCGAGGAGAAGCAATCACCTGCTTCTGGCAATCAGGACACGAAGGATGTCATCCATCCGGTGAAGGTTCAAGAGGGCAAGTTATCTGAGGATTCAGATGATGAGTTCTATGATGTAGACAAGGTTGAGACTAGTCAAGAAATGCATTCAAGTGATAGTGCGAATACTGGCATTGACAACAGGGGTCAAGAGGAAAATTTTCCTTCGATGGAAGAGTTGGAGTGTCTAGTCCATGGTGGACTGCCAATGGCTTTGAGAGGAGAGCTATGGCAAGCTTTTGTTGGCATTGGAGTGCGTAGGGTAAAAGGGTACTATGATAGTCTCCTTGTGGCAGAAGGTGAACTAGAAGATACCAGTGGTTCGCGTTCTTCAACCTCGGATGTTGCCGGGGAAAATACTGAAGTATCTTCTGAAAAGTGGAAAGGGCAAATAGAGAAGGACTTGCCTAGAACTTTTCCAGGTCATCCTGCTTTAGACGAGGATGGAAGAAATGCTTTGAGACGTTTGCTTCTAGCTTATGCTAGACACAATCCAGCAGTTGGTTACTGCCAGGCAATGAACTTCTTTGCTGGTCTCTTACTTCTATTGATGCCAGAAGAGAATGCATTTTGGACATTGGTAGGAATTATCGACGACTATTTTGATGGATACTTTTCTGAAGAAATGATTGAGTCGCAGGTGGATCAGCTTGTTTTAGAGGAGTTGGTACGAGAAAAATTCCCAAAACTAGCAAATCACCTGGATTACCTTGGTCTTCAAGTTGCATGGGTTACTGGACCATGGTTCCTATCCATTTTCACCAATGTGCTTCCTTGGGAGAGTGTTCTCCGTGTCTGGGATGTCCTTCTGTTTGATGGGAATCGTGTGATGCTATTCCGGACAGCTCTTGCACTACTTGAGTTTTATGGTCCTGCACTTGTGACCACAAAAGATGCCGGTGATGCAGTTACACTTTTGCAGTCTTTAGCTGGCTCCACTTTTGACAGCAGCCAGCTTGTCTTGACAGCTCGCATGGGATATCAGTCTGTAGATGAAACAGGATTGCAAGAGTTAAGGAATAAGCATCGGCCATCTGTTCTATCTTCAATGGAAGAAAGAGCAAAAGGTCTAGGTGCCTTGGACACCAACGGTCTTGCATCAAAGCTCTATAATTTCAAACATGATCCTGAACCACTGGTGTCAATAAGTGATTCGCAAGATCAGATGAGTGATGTGGGAGATGGGAATGCCAACCAAAGTGATTCTGGAAATATGGATGATATGTATGGCGGTCTGACAGTCAGTTCTGAGATTGAAGCTTTACCGGACCCAAAGGACCAGATCTCTTGGCTGAAGTTTGAATTATGCCGATTGCTAGAGGAGAGAAGGTCAGCTGTTCTCAGAGCTGATGAACTAGAGACGGCATTGATGGAAATGGTCAAGCAAGATAATAGGCGGCAATTAAGTGCAAAGGTTGAGCAGTCGGAACAAGAATTGTCTGAACTAAGACAAACCCTATTGGATAAGCAGGAACAAGAGCAAGCAATGTGTCAGGTACTGTTGCGAGTGGAACAAGAACTGAAAATTGCAGAGGAAGCACGCATCTCTGCTGAGCAGGATGCCGCAGCTCAGAGATACGCTGTTAATGTGCTGCAGGAAAAGTATGAGGAAGCTATGGCTTCACTCGCGAAAATGGAGAACAGGGCTGTAATGGCAGAGACAATGTTGGAGGCCACACTGCAGTATCAAACTAGCCAGCAGAAAGCTCTTCTTTCCCCCTTGCCTTCTCCAAGAACATCCATGATAGACGCATCCCCTGGTCGAGCAAACCATGATTCATCACAGGAGTTCCAGCCCAAAAAAATAAACTTGCTCTCACCATTTTCACTGAGTTGGCGCGATAAGAACAAGGGAAAGCAGAACAATGTTGATGACAGTGCCAAGCTTACTGATGCACATGATCAAAGGGAAGAAATAACCAACAACAATGACGAGAAGCAGGTAGAAACACCAAAACTGGATGTGCTAGAAGAGTCTATGGGTTCACCCAAAGAAGATAACAAGTCGAGAGTAGAGGTGCCAAAGGAAGACAGCGATTTGGCAAGCGTCCAAGTAGTCGCAAATGATATGAATGGGCAGCATGAACAGTTGCAAGAAATAAAACTGGATTGAACAGTTGCAAGAAATCACAAACCAACCTTTTGCATATATCTTCACCACTATGGTATTCTTTTATCTGATCTTACCATGGTTGTCGAGAGAGTTAAACCTGGAGGGCTTCAAGGTTCGAACACGATCATTGCTGTACCTATTTTTTGCTCTGTCCCCTTCTTTTTAATTGTTTCCTTTTTTTTTTTTTATCATTGCCACTCTTGTAGGTCTATAGGTTACTTTTTCTCTCCATTATTACTCGAGAAGAGAAAAAAAGGGCGAAAGTTATCTGGTTGTCCATTAGTTAACTTTCGATGTAAATGCATCAGGGGAAATTACCAAATGTAGAAACACACTTTGCAATTATGGTATGCTTGT              ]
[+] EMBL CF323733             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGCTGATGAACTAGAGACGGCATTGATGGAAATGGTCAAGCAAGATAATAGGCGGCAATTAAGTGCAAAGGTTGAGCAGTCGGAACAAGAATTGTCTGAACTAAGACAAACCCTATTGGATAAGCAGGAACAAGAGCAAGCAATGTGTCAGGTACTGTTGCGAGTGGAACAAGAACTGAAAATTGCAGAGGAAGCACGCATCTCTGCTGAGCAGGATGCCGCAGCTCAGAGATACGCTGTTAATGTGCTGCAGGAAAAGTATGAGGAAGCTATGGCTTCACTCGCGAAAATGGAGAACAGGGCTGTAATGGCAGAGACAATGTTGGAGGCCACACTGCAGTATCAAACTAGCCAGCAGAAAGCTCTTCTTTCCCCCTTGCCTTCTCCAAGAACATCCATGATAGACGCATCCCCTGGTCGAGCAAACCATGATTCATCACAGGAGTTCCAGCCCAAAAAAATAAACTTGCTCTCACCATTTTCACTGAGTTGGCGCGATAAGAACAAGGGAAAGCAGAACAATGTTGATGACAGTGCCAAGCTTACTGATGCACATGATCAAAGGGAAGAAATAACCAACAACAATGACGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF328370             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTGATCTTACC TGGTTGTCGAGAGAGTTAAACCTGGAGGGCTTCAAGGTTCGAACACGATCATTGCTGTACCTATTTTTTGCTCTGTCCCCTTCTTTTTAATTGTTTCC TTTTTTTTTTTTATCATTGCCACTCTTGTGGGTCTATAGGTTACTTTTTCTCTCCATTATTACTCGAGAAGAGAAAAAAAGGGCGAAAGTTATCTGGTTGTCCATTAGTTAACTTTCGATGTAAATGCATCAGGGGAAATTACCAAATGTAGAAACACACTTTGCAATTATGGTATGCTTGTTTGTGAAAAAAAA ]
[-] EMBL CF328369             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGATCTTACCATGGTTGTCGAGAGAGTTAAACCTGGAGGGCTTCAAGGTTCGAACACGATCATTGCTGTACCTATTTTTTGCTCTGTCCCCTTCTTTTTAATTGTTTCC TTTTTTTTTTTTATCATTGCCACTCTTGTGGGTCTATAGGTTACTTTTTCTCTCCATTATTACTCGAGAAGAGAAAAAAAGGGCGAAAGTTATCTGGTTGTCCATTAGTTAACTTTCGATGTAAATGCATCAGGGGAAATTACCAAATGTAGAAACACACTTTGCAATTATGGTATGCTTGTTTGTGAAAAAAAAA]


>consensus_6286#0 ATCAGTTTGCTTTGGGCGTGGTCTTCCTCGAGTCCCCCACATTTCTTCCTCCCCTCCGTA CGGATACACACACTCTTTCTCTCTCGTGACTGATCCGACTCCGCCGCCGCCGCCGCCGCC GCCGCCGCCGCCGCCGTCTGCTGCTGCTGCGGGGGGTGGGAGGAGATGAAGCCGAAGAGC CTCCCGTTCATCGCCTTCGAGCACAAGCGGGATGCCTATGGCTTCGCAGTTCGGCCCCAA CACTTGCAGCGTTACAAGGAGTATGCAGGCATCTACAAGGAGGAGGAAGAGGAGAGATCC GATAGATGGAAGAATTTTCTGGAGAGGCAGTCAGAACCATCGGGACAGGAAGAGAAGGGT GAAGCTGCCGGGCGTGTTGTGGATAGCAGTGGAATTGGCGGTTCTTCGTTGCTGCAGGAG AAGATTGTGCAAGGACCACACAAGATCGAGATATGGAAGCCAATCAGACCATCCCTGGGC AACATAGAGCAGATCATGAGTGTACGTGTCGAGGAGAAGCAATCACCTGCTTCTGGCAAT CAGGACACGAAGGATGTCATCCATCCGGTGAAGGTTCAAGAGGGCAAGTTATCTGAGGAT TCAGATGATGAGTTCTATGATGTAGACAAGGTTGAGACTAGTCAAGAAATGCATTCAAGT GATAGTGCGAATACTGGCATTGACAACAGGGGTCAAGAGGAAAATTTTCCTTCGATGGAA GAGTTGGAGTGTCTAGTCCATGGTGGACTGCCAATGGCTTTGAGAGGAGAGCTATGGCAA GCTTTTGTTGGCATTGGAGTGCGTAGGGTAAAAGGGTACTATGATAGTCTCCTTGTGGCA GAAGGTGAACTAGAAGATACCAGTGGTTCGCGTTCTTCAACCTCGGATGTTGCCGGGGAA AATACTGAAGTATCTTCTGAAAAGTGGAAAGGGCAAATAGAGAAGGACTTGCCTAGAACT TTTCCAGGTCATCCTGCTTTAGACGAGGATGGAAGAAATGCTTTGAGACGTTTGCTTCTA GCTTATGCTAGACACAATCCAGCAGTTGGTTACTGCCAGGCAATGAACTTCTTTGCTGGT CTCTTACTTCTATTGATGCCAGAAGAGAATGCATTTTGGACATTGGTAGGAATTATCGAC GACTATTTTGATGGATACTTTTCTGAAGAAATGATTGAGTCGCAGGTGGATCAGCTTGTT TTAGAGGAGTTGGTACGAGAAAAATTCCCAAAACTAGCAAATCACCTGGATTACCTTGGT CTTCAAGTTGCATGGGTTACTGGACCATGGTTCCTATCCATTTTCACCAATGTGCTTCCT TGGGAGAGTGTTCTCCGTGTCTGGGATGTCCTTCTGTTTGATGGGAATCGTGTGATGCTA TTCCGGACAGCTCTTGCACTACTTGAGTTTTATGGTCCTGCACTTGTGACCACAAAAGAT GCCGGTGATGCAGTTACACTTTTGCAGTCTTTAGCTGGCTCCACTTTTGACAGCAGCCAG CTTGTCTTGACAGCTCGCATGGGATATCAGTCTGTAGATGAAACAGGATTGCAAGAGTTA AGGAATAAGCATCGGCCATCTGTTCTATCTTCAATGGAAGAAAGAGCAAAAGGTCTAGGT GCCTTGGACACCAACGGTCTTGCATCAAAGCTCTATAATTTCAAACATGATCCTGAACCA CTGGTGTCAATAAGTGATTCGCAAGATCAGATGAGTGATGTGGGAGATGGGAATGCCAAC CAAAGTGATTCTGGAAATATGGATGATATGTATGGCGGTCTGACAGTCAGTTCTGAGATT GAAGCTTTACCGGACCCAAAGGACCAGATCTCTTGGCTGAAGTTTGAATTATGCCGATTG CTAGAGGAGAGAAGGTCAGCTGTTCTCAGAGCTGATGAACTAGAGACGGCATTGATGGAA ATGGTCAAGCAAGATAATAGGCGGCAATTAAGTGCAAAGGTTGAGCAGTCGGAACAAGAA TTGTCTGAACTAAGACAAACCCTATTGGATAAGCAGGAACAAGAGCAAGCAATGTGTCAG GTACTGTTGCGAGTGGAACAAGAACTGAAAATTGCAGAGGAAGCACGCATCTCTGCTGAG CAGGATGCCGCAGCTCAGAGATACGCTGTTAATGTGCTGCAGGAAAAGTATGAGGAAGCT ATGGCTTCACTCGCGAAAATGGAGAACAGGGCTGTAATGGCAGAGACAATGTTGGAGGCC ACACTGCAGTATCAAACTAGCCAGCAGAAAGCTCTTCTTTCCCCCTTGCCTTCTCCAAGA ACATCCATGATAGACGCATCCCCTGGTCGAGCAAACCATGATTCATCACAGGAGTTCCAG CCCAAAAAAATAAACTTGCTCTCACCATTTTCACTGAGTTGGCGCGATAAGAACAAGGGA AAGCAGAACAATGTTGATGACAGTGCCAAGCTTACTGATGCACATGATCAAAGGGAAGAA ATAACCAACAACAATGACGAGAAGCAGGTAGAAACACCAAAACTGGATGTGCTAGAAGAG TCTATGGGTTCACCCAAAGAAGATAACAAGTCGAGAGTAGAGGTGCCAAAGGAAGACAGC GATTTGGCAAGCGTCCAAGTAGTCGCAAATGATATGAATGGGCAGCATGAACAGTTGCAA GAAATAAAACTGGATTGAACAGTTGCAAGAAATCACAAACCAACCTTTTGCATATATCTT CACCACTATGGTATTCTTTTATCTGATCTTACCATGGTTGTCGAGAGAGTTAAACCTGGA GGGCTTCAAGGTTCGAACACGATCATTGCTGTACCTATTTTTTGCTCTGTCCCCTTCTTT TTAATTGTTTCCTTTTTTTTTTTTATCATTGCCACTCTTGTGGGTCTATAGGTTACTTTT TCTCTCCATTATTACTCGAGAAGAGAAAAAAAGGGCGAAAGTTATCTGGTTGTCCATTAG TTAACTTTCGATGTAAATGCATCAGGGGAAATTACCAAATGTAGAAACACACTTTGCAAT TATGGTATGCTTGTTTGTGAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)