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Oryza sativa
cluster # 6289 cluster # 6289       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6289#0 length = 946 sequences # 4  

consensusID : consensus_6289#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 946
fasta sequence
                              [TATCACGCAGATGCGGCAGCTCAAGGGCGAGGTGGGCGTCGTCGCCAGGGCAGACGGATCGGCGCTGTTCGAGATGGGCAACACCAGGGTCATTGCCGCTGTCTACGGCCCTCGAGAGGTCCAGAACAAAGGTCAGCAAGTCAACAGCAAAGATGCTTTGGTGCGTTGTGAGTATAGGATGGCAGATTTTAGTACTGGGGATCGAAGGAGAAAGCCAAAGGGTGACAGGCGATCAACAGAAATTTCACTTNTTATCCGGCAAACAATGGAGGCAAGCATTTTAACACATTTAATGCCACGTTCACAGATTGATATATTTGTCCAAGTTCTTCAAGCTGATGGTGGTACAAGGGCTGCATGCATCAATGCTGCTACATTAGCACTTGCAGATGCTGGGATTCCCATGCGAGACATTGTTACATCTT-GCAGTGCTGGTTATCTGTGTTCTACTCCTTTGCTTGATCTGAATTATATAGAAGACAGTGCTGGAGGTCCAGATGTCCCTGTTGGCTTTCTTACCAAGATGGACCAAGTTACTCTTCTGCAGATGGATGCAAAATTACCCATGGATACATTTGAAACTGTAATGGACCTTGCAATTGAAGGCTGCAAAGCTATTGCCAAACTACATCCGAGAGGTGCTATTGGAGAACACACAGACGGCTGGAGTGCCAGCGTGGTTAGTTAACGCTAGTAGGTGATGCCCTTCAATTGAGCCACCTTTGACTGGTCTTGTGACAAGCAAATTCCCTAGAGATTCAAAGATTAATGGTGCGATCCAAATACATAATGAAAGATGGTCAACATATCACTAGAATTTAGATTATGCTGATTAAGAACCATTTCTCTGCCAGATATTTGCCATCAGATTCAAAATTATGTGGAGCTGGAAACTGCCAATCATCAATGCTCAACTGTGGAGTGATTTGCTGATCCAAAAAAAAAA]

[+] EMBL CF323848             [TATCACGCAGATGCGGCAGCTCAAGGGCGAGGTGGGCGTCGTCGCCAGGGCAGACGGATCGGCGCTGTTCGAGATGGGCAACACCAGGGTCATTGCCGCTGTCTACGGCCCTCGAGAGGTCCAGAACAAAGGTCAGCAAGTCAACAGCAAAGATGCTTTGGTGCGTTGTGAGTATAGGATGGCAGATTTTAGTACTGGGGATCGAAGGAGAAAGCCAAAGGGTGACAGGCGATCAACAGAAATTTCACTTGTTATCCGGCAAACAATGGAGGCAAGCATTTTAACACATTTAATGCCACGTTCACAGATTGATATATTTGTCCAAGTTCTTCAAGCTGATGGTGGTACAAGGGCTGCATGCATCAATGCTGCTACATTAGCACTTGCAGATGCTGGGATTCCCATGCGAGACATTGTTACATCTT GCAGTGCTGGTTATCTGTGTTCTACTCCTTTGCTTGATCTGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OSC24601             [                                                                                                                                                                               AGGATNGCAGATTTTAGTACTGGGGATCGAAGGAGAAAGCCAAAGGGTGACAGGCGATCAACAGAAATTTCACTTNTTATCCGGCAAACAATGGAGGCAAGCATTTTAACACATTTAATNCCACGTTCACAGATTGATATATTTGTCCAAGTTCTTCAAGCTGATGGTGGTACAAGGGCTGCATNCATCANTNCTGCTACATTAGCACTTGCAGATNCTGGGATTCCCATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL OSC27871             [                                                                                                                                                                               AGGNTGGCAGATTTTAGTACTGGGGATCGNNGGAGATAGCCAAAGGGTGACAGGCGATCAACAGAAANTTCACTTNNTATCCGGCAAACANTGGAGGCAAGCATTTTAACACATTTAGTGCCACGNTCACAGATTGTTATATTTNTCCAAGTTCTTCAAGCTGATGGTGGAACAAGGGCTGCATGCATCAATGCTGCTACATTAGCACTTGCAGATGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BI801996             [                                                                                                                                                                                                                                                                                                                                                                                                 cCAAATCCTGGGATTCCCATGCGAGACATTGTTACATCTTCCCAGTGCTGGTTATCTGTGTTCTACTCCTTTGCTTGATCTGAATTATATAGAAGACAGTGCTGGAGGTCCAGATGTCCCTGTTGGCTTTCTTACCAAGATGGACCAAGTTACTCTTCTGCAGATGGATGCAAAATTACCCATGGATACATTTGAAACTGTAATGGACCTTGCAATTGAAGGCTGCAAAGCTATTGCCAAACTACATCCGAGAGGTGCTATTGGAGAACACACAGACGGCTGGAGTGCCAGCGTGGTTAGTTAACGCTAGTAGGTGATGCCCTTCAATTGAGCCACCTTTGACTGGTCTTGTGACAAGCAAATTCCCTAGAGATTCAAAGATTAATGGTGCGATCCAAATACATAATGAAAGATGGTCAACATATCACTAGAATTTAGATTATGCTGATTAAGAACCATTTCTCTGCCAGATATTTGCCATCAGATTCAAAATTATGTGGAGCTGGAAACTGCCAATCATCAATGCTCAACTGTGGAGTGATTTGCTGATCCAAAAAAAAAA]


>consensus_6289#0 TATCACGCAGATGCGGCAGCTCAAGGGCGAGGTGGGCGTCGTCGCCAGGGCAGACGGATC GGCGCTGTTCGAGATGGGCAACACCAGGGTCATTGCCGCTGTCTACGGCCCTCGAGAGGT CCAGAACAAAGGTCAGCAAGTCAACAGCAAAGATGCTTTGGTGCGTTGTGAGTATAGGAT GGCAGATTTTAGTACTGGGGATCGAAGGAGAAAGCCAAAGGGTGACAGGCGATCAACAGA AATTTCACTTNTTATCCGGCAAACAATGGAGGCAAGCATTTTAACACATTTAATGCCACG TTCACAGATTGATATATTTGTCCAAGTTCTTCAAGCTGATGGTGGTACAAGGGCTGCATG CATCAATGCTGCTACATTAGCACTTGCAGATGCTGGGATTCCCATGCGAGACATTGTTAC ATCTTGCAGTGCTGGTTATCTGTGTTCTACTCCTTTGCTTGATCTGAATTATATAGAAGA CAGTGCTGGAGGTCCAGATGTCCCTGTTGGCTTTCTTACCAAGATGGACCAAGTTACTCT TCTGCAGATGGATGCAAAATTACCCATGGATACATTTGAAACTGTAATGGACCTTGCAAT TGAAGGCTGCAAAGCTATTGCCAAACTACATCCGAGAGGTGCTATTGGAGAACACACAGA CGGCTGGAGTGCCAGCGTGGTTAGTTAACGCTAGTAGGTGATGCCCTTCAATTGAGCCAC CTTTGACTGGTCTTGTGACAAGCAAATTCCCTAGAGATTCAAAGATTAATGGTGCGATCC AAATACATAATGAAAGATGGTCAACATATCACTAGAATTTAGATTATGCTGATTAAGAAC CATTTCTCTGCCAGATATTTGCCATCAGATTCAAAATTATGTGGAGCTGGAAACTGCCAA TCATCAATGCTCAACTGTGGAGTGATTTGCTGATCCAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)