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Oryza sativa
cluster # 6304 cluster # 6304       Sequences # 4       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6304#0 length = 3596 sequences # 3  
 consensus_6304#1 length = 613 sequences # 1  
consensusID : consensus_6304#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3596
fasta sequence 
                              [GCGGCGACCACCACCGTTCCTCTACGAGACTGATCCCGTCGTCGCCATGGCCTCTGTGGCGGCGCAGCTGGTCGGCGCGGCCCTCACGCTGCTGCTCCTCTCCGTCGCCGCAGCACCCGCGCGGGCCAACGAAGTGCCACGCCTCTTCCTCCAGGAGATCGCCAGCGACTACGACGATGGGATCGGAGGCACGGCGGGGGATAAAGGGGCGAAGACCATCGCCGGGAGTCCCATCGTAGCCGGGGTCATGAACGACCGTCTCAAGGCGCTTACCTCCTCCTTTGCCAAGGCTATTGGCGACAAGCTCGACTACTGCATCAAGGACACCGACAAGGAGTGGAATGCTGCGTTCAATTTCTCCAAGGACACCACCTTCCTCACCAATTGCATGAAGCAGACCAACGGAGACCTGCAGCAGCGTGTCTGCACAGCCGCAGAGATGAAGTTCTACTTCAACAGTTTGATCGACGCCGGGGAGAAGAGCGGGGAGATTAATTATGTCAGGCCCAACAAAAACTGCAATCTGTCATCCTGGATGGACGGCTGCGAGCCGGGCTGGGCATGCACTGTTGGAAAAGAGCAGAAAATCAATCTGCAGGATGCTAAGGATATCCCTTACAGAGCTCTTGACTGCCAAGCTTGTTGCCCTGGCTTCTTCTGCCCCCATGGTCTCACTTGCATGATACCTTGCCCTCTGGGTGCATACTGCCCGCTGTCCAGCTTGAACAAAACTACAGGCATCTGTGACCCATACAACTATCAACCACCCGCTGGAAATCCGAATCATTCTTGCGGTGGTGCTGACAATTGGGCAGACGTGGTTAGCACTGACGATATTTTCTGCCCACCTGGATTCTACTGCCCGAGCACGACACAGAAACTCCCTTGTAGTAGTGGGTTTTACTGCAGGAAGGGATCAACCTCACAAACTAGATGCTACAAGAAGAGCTCTTGTCCACCAAACTCTGCTACACAGGACATTACAATATTTGGTGCATTGTTAGTGGTTGCCTCCTGTTTAGTGCTCCTGATCATCTACAACTTCTCCGGCCAAATTTTGACGAACCGCGAGAAGAAGCAAGCAAAATCCCGAGAGGCTGCTGCAAGGTATGCGAGAGAGACTGCGCAAGCTCGAGAGAGGTGGAAATCAGCAAAGGATGTCGCCAAGAAAGCCGGAACGGGTCTTCAGTCACAATTGTCTCGCACCTTCTCACGGAAGAAGGCTGCCCAGACACCGAAAGGTGGTGGCGGCGGCGGCAGCAGCCTGCCTCCAAGCGGAGAAGATGGGGGCGGGAGGAAGAAGAACCTGACCGACATGATGCAGTCGCTCGAGGACAACCCGGATAACGATGAAGGATTTAACCTGGAGATAGGAGACAAGGGCCTGAGGAAGAACATGCCGAAAGGGAAGCAGATGCACAGCCGGAGCCAGATCTTCAAGTATGCGTATGGCCAGATCGAGAAGGAGAAGGCGATGCAGCAGGAGAACCACAACCTGACCTTCTCAGGCGTGATCAGCATGGCCAAGGAGCACGACGTCAGCACGAGGCCCGTCATCGAGATCGCCTTCAAGGACCTTACGCTGACGCTGAAGGGGAGCAAGAAGAAGCTCTTGAGGTCCGTGACAGGGAAGCTCAGGCCTGGCCGTGTGGCCGCCGTGATGGGCCCATCTGGCGCGGGGAAGACCACGTTTCTCAGCGCCATTGCCGGGAAGGCGACTGGCTGCGAGACGTCAGGCATGGTGCTCATCAATGGGAAGGTAGAACCCATCCGCGCGTATAAGAGGATCATTGGCTTTGTCCCCCAGGATGATATCGTTCATGGAAACCTCACCGTCCAAGAAAATCTCTGGTTCAATGCAAGATGCAGGCTTTCAGCAGACATGTCGAAAGCTGACAAGGTGCTGGTCGTGGAGAGGGTGATTGAGTCACTGGGACTGCAGGCTGTTCGAGATTCTCTGGTCGGGACAGTGGAACAGCGCGGCATCTCCGGTGGGCAGCGCAAGCGAGTCAATGTTGGCCTGGAAATGGTGATGGAGCCATCGGTGCTGATTCTGGATGAGCCAACGTCCGGTCTGGACAGCGCCTCCTCCCTCCTCCTGCTCCGCGCCCTTCGCCGTGAAGCTCTCGAGGGCGTCAACATCTCCATGGTTGTTCATCAACCCAGCTACACTCTGTACAGGATGTTCGACGACCTGATACTTCTAGCCAAGGGAGGGATGACGGTGTACCATGGGCCTGTGAAGAAGGTGGAGGAGTACTTCACGGGGCTGGGCATCACCGTGCCGGAGCGAGTGAATCCGCCGGACTACTACATCGACATCCTGGAGGGCATCGTCAAGCCCACCATGAGCGCCGGCGTCAGCGTCAAGGACCTGCCGCTCAGGTGGATGCTGCACAATGGCTACGACGTCCCCCGGGACATGCTGCAGAGCTCCTCCGACTCTGAGTCCTCCTTCCGAGGGAGCACGAGCCCGGCCTCCGGCGATGCCTCCGTCGCGGCCGAGGTATGGGGCAACGTCAAGGACATCGTCGGCCAGAAGAAGGACGAGTATGACTACAACAAGAGCACTGAAGATTTGTCGAACCGCTGCACTCCTGGCATTCTTAGGCAGTACAGGTACTTCCTCGGAAGGTGTGGCAAGCAAAGGCTCCGTGAAGCGAGAATACAAGGGGTTGATTACCTCATACTCTGCCTTGCCGGGATATGCCTGGGGACACTGGCCAAAGTCAGTGACGAGACGTTTGGAGCGCTTGGATACACATACACAGTCATTGCTGTTTCTCTGCTGTGCAAAATTGGAGCCTTGAGATCATTCGCGCTTGACAAGATATACTATTGGAGGGAGAGGGCCTCCGGGATGAGCTCTCTCGCCTACTTCATGTCCAAGGACACCATAGACCACCTCAACACCATCGTCAAGCCCATAGTCTACCTCTCTATGTTCTACTTCTTCAACAACCCCAGGTCATCCATCTGGGAGAACTACGTCATTCTTGTTGCCCTCGTCTACTGCGTCACTGGCATCGGCTACACTTTCGCCATCTTCTTTCAGCCAGGCTCTGCACAGTTGTGGTCTGCGCTGCTTCCGGTCGTTTTGACTCTGATAGCAACTCAGCGGAAGAACACTTTCTTTGCTGACCTGTGCTACACAAAGTGGGCTCTAGAAGGGTTTGTGATGGCAAATGCTCAAAACTACTCCGGGGTGTGGCTGATTACACGGTGCGGTTCGCTGGTCAAGAGCGGCTATGACATCAACGACAAGGCTCTTTGCATAGTGGTTCTTATTGCCAATGGTATAGTTTTCCGCTGCGTGGCATTCTTCTGCATGGTGACCTTCCAGAAGCACTAGAATCGTCCATGACAAGAGAAAAACAACCCCATAATTCTCCTTCTTTGTCTATCCATGTAGCTGATACGTTCATTCATTGATTTATGTGCAATAGAAATGTACATTATAACCTCTTCTGTCGGGCGCCAGGTGTAGATGAGAGCAGACTCTTCAATAGTAGTAAAAAACTGATCAGGATTCATGAATACCCTAAATCTCTATCTATTATAAAAATTGAAAATGTTTTTGCTGTATCTATAAAAGA]

[+] EMBL AK069444             [GCGGCGACCACCACCGTTCCTCTACGAGACTGATCCCGTCGTCGCCATGGCCTCTGTGGCGGCGCAGCTGGTCGGCGCGGCCCTCACGCTGCTGCTCCTCTCCGTCGCCGCAGCACCCGCGCGGGCCAACGAAGTGCCACGCCTCTTCCTCCAGGAGATCGCCAGCGACTACGACGATGGGATCGGAGGCACGGCGGGGGATAAAGGGGCGAAGACCATCGCCGGGAGTCCCATCGTAGCCGGGGTCATGAACGACCGTCTCAAGGCGCTTACCTCCTCCTTTGCCAAGGCTATTGGCGACAAGCTCGACTACTGCATCAAGGACACCGACAAGGAGTGGAATGCTGCGTTCAATTTCTCCAAGGACACCACCTTCCTCACCAATTGCATGAAGCAGACCAACGGAGACCTGCAGCAGCGTGTCTGCACAGCCGCAGAGATGAAGTTCTACTTCAACAGTTTGATCGACGCCGGGGAGAAGAGCGGGGAGATTAATTATGTCAGGCCCAACAAAAACTGCAATCTGTCATCCTGGATGGACGGCTGCGAGCCGGGCTGGGCATGCACTGTTGGAAAAGAGCAGAAAATCAATCTGCAGGATGCTAAGGATATCCCTTACAGAGCTCTTGACTGCCAAGCTTGTTGCCCTGGCTTCTTCTGCCCCCATGGTCTCACTTGCATGATACCTTGCCCTCTGGGTGCATACTGCCCGCTGTCCAGCTTGAACAAAACTACAGGCATCTGTGACCCATACAACTATCAACCACCCGCTGGAAATCCGAATCATTCTTGCGGTGGTGCTGACAATTGGGCAGACGTGGTTAGCACTGACGATATTTTCTGCCCACCTGGATTCTACTGCCCGAGCACGACACAGAAACTCCCTTGTAGTAGTGGGTTTTACTGCAGGAAGGGATCAACCTCACAAACTAGATGCTACAAGAAGAGCTCTTGTCCACCAAACTCTGCTACACAGGACATTACAATATTTGGTGCATTGTTAGTGGTTGCCTCCTGTTTAGTGCTCCTGATCATCTACAACTTCTCCGGCCAAATTTTGACGAACCGCGAGAAGAAGCAAGCAAAATCCCGAGAGGCTGCTGCAAGGTATGCGAGAGAGACTGCGCAAGCTCGAGAGAGGTGGAAATCAGCAAAGGATGTCGCCAAGAAAGCCGGAACGGGTCTTCAGTCACAATTGTCTCGCACCTTCTCACGGAAGAAGGCTGCCCAGACACCGAAAGGTGGTGGCGGCGGCGGCAGCAGCCTGCCTCCAAGCGGAGAAGATGGGGGCGGGAGGAAGAAGAACCTGACCGACATGATGCAGTCGCTCGAGGACAACCCGGATAACGATGAAGGATTTAACCTGGAGATAGGAGACAAGGGCCTGAGGAAGAACATGCCGAAAGGGAAGCAGATGCACAGCCGGAGCCAGATCTTCAAGTATGCGTATGGCCAGATCGAGAAGGAGAAGGCGATGCAGCAGGAGAACCACAACCTGACCTTCTCAGGCGTGATCAGCATGGCCAAGGAGCACGACGTCAGCACGAGGCCCGTCATCGAGATCGCCTTCAAGGACCTTACGCTGACGCTGAAGGGGAGCAAGAAGAAGCTCTTGAGGTCCGTGACAGGGAAGCTCAGGCCTGGCCGTGTGGCCGCCGTGATGGGCCCATCTGGCGCGGGGAAGACCACGTTTCTCAGCGCCATTGCCGGGAAGGCGACTGGCTGCGAGACGTCAGGCATGGTGCTCATCAATGGGAAGGTAGAACCCATCCGCGCGTATAAGAGGATCATTGGCTTTGTCCCCCAGGATGATATCGTTCATGGAAACCTCACCGTCCAAGAAAATCTCTGGTTCAATGCAAGATGCAGGCTTTCAGCAGACATGTCGAAAGCTGACAAGGTGCTGGTCGTGGAGAGGGTGATTGAGTCACTGGGACTGCAGGCTGTTCGAGATTCTCTGGTCGGGACAGTGGAACAGCGCGGCATCTCCGGTGGGCAGCGCAAGCGAGTCAATGTTGGCCTGGAAATGGTGATGGAGCCATCGGTGCTGATTCTGGATGAGCCAACGTCCGGTCTGGACAGCGCCTCCTCCCTCCTCCTGCTCCGCGCCCTTCGCCGTGAAGCTCTCGAGGGCGTCAACATCTCCATGGTTGTTCATCAACCCAGCTACACTCTGTACAGGATGTTCGACGACCTGATACTTCTAGCCAAGGGAGGGATGACGGTGTACCATGGGCCTGTGAAGAAGGTGGAGGAGTACTTCACGGGGCTGGGCATCACCGTGCCGGAGCGAGTGAATCCGCCGGACTACTACATCGACATCCTGGAGGGCATCGTCAAGCCCACCATGAGCGCCGGCGTCAGCGTCAAGGACCTGCCGCTCAGGTGGATGCTGCACAATGGCTACGACGTCCCCCGGGACATGCTGCAGAGCTCCTCCGACTCTGAGTCCTCCTTCCGAGGGAGCACGAGCCCGGCCTCCGGCGATGCCTCCGTCGCGGCCGAGGTATGGGGCAACGTCAAGGACATCGTCGGCCAGAAGAAGGACGAGTATGACTACAACAAGAGCACTGAAGATTTGTCGAACCGCTGCACTCCTGGCATTCTTAGGCAGTACAGGTACTTCCTCGGAAGGTGTGGCAAGCAAAGGCTCCGTGAAGCGAGAATACAAGGGGTTGATTACCTCATACTCTGCCTTGCCGGGATATGCCTGGGGACACTGGCCAAAGTCAGTGACGAGACGTTTGGAGCGCTTGGATACACATACACAGTCATTGCTGTTTCTCTGCTGTGCAAAATTGGAGCCTTGAGATCATTCGCGCTTGACAAGATATACTATTGGAGGGAGAGGGCCTCCGGGATGAGCTCTCTCGCCTACTTCATGTCCAAGGACACCATAGACCACCTCAACACCATCGTCAAGCCCATAGTCTACCTCTCTATGTTCTACTTCTTCAACAACCCCAGGTCATCCATCTGGGAGAACTACGTCATTCTTGTTGCCCTCGTCTACTGCGTCACTGGCATCGGCTACACTTTCGCCATCTTCTTTCAGCCAGGCTCTGCACAGTTGTGGTCTGCGCTGCTTCCGGTCGTTTTGACTCTGATAGCAACTCAGCGGAAGAACACTTTCTTTGCTGACCTGTGCTACACAAAGTGGGCTCTAGAAGGGTTTGTGATGGCAAATGCTCAAAACTACTCCGGGGTGTGGCTGATTACACGGTGCGGTTCGCTGGTCAAGAGCGGCTATGACATCAACGACAAGGCTCTTTGCATAGTGGTTCTTATTGCCAATGGTATAGTTTTCCGCTGCGTGGCATTCTTCTGCATGGTGACCTTCCAGAAGCACTAGAATCGTCCATGACAAGAGAAAAACAACCCCATAATTCTCCTTCTTTGTCTATCCATGTAGCTGATACGTTCATTCATTGATTTATGTGCAATAGAAATGTACATTATAACCTCTTCTGTCGGGCGCCAGGTGTAGATGAGAGCAGACTCTTCAATAGTAGTAAAAAACTGATCAGGATTCATGAATACCCTAAATCTCTATCTATTATAAAAATTGAAAATG                      ]
[+] EMBL CB671655             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCACAACCTTAATGCTACAAGAAGAGCTCTTGTCCACCAAACTCTGCTACACAGGACATTACAATATTTGGTGCATTGTTAGTGGTTGCCTCCTGTTTAGTGCTCCTGATCATCTACAACTTCTCCGGCCAAATTTTGACGAACCGCGAGAAGAAGCAAGCAAAATCCCGAGAGGCTGCTGCAAGGTATGCGAGAGAGACTGCGCAAGCTCGAGAGAGGTGGAAATCAGCAAAGGATGTCGCCAAGAAAGCCGGAACGGGTCTTCAGTCACAATTGTCTCGCACCTTCTCACGGAAGAAGGCTGCCCAGACACCGAAAGGTGGTGGCGGCGGCGGCAGCAGCCTGCCTCCAAGCGGAGAAGATGGGGGCGGGAGGAAGAAGAACCTGACCGACATGATGCAGTCGCTCGAGGACAACCCGGATAACGATGAAGGATTTAACCTGGAGATAGGAGACAAGGGCCTGAGGAAGAACATGCCGAAAGGGAAGCAGATGCACAGCCGGAGCCAGATCTTCAAGTATGCGTATGGCCAGATCGAGAAGGAGAAGGCGATGCAGCAGGAGAACCACAACCTGACCTTCTCAGGCGTGATCAGCATGGCCAAGGAGCACGACGTCAGCACGAGGCCCGTCATCGAGATCGCCTTCAAGGACCTTACGCTGACGCTGAAGGGGAGCAAGAAGAAGCTCTTGAGGTCCGTGACAGGGAAGCTCAGGCCTGGCCGTGTGGCCGCCGTGATGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB671656             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCGGGATGAGCTCTCTCGCCTACTTCATGTCCAAGGACACCATAGACCACCTCAACACCATCGTCAAGCCCATAGTCTACCTCTCTATGTTCTACTTCTTCAACAACCCCAGGTCATCCATCTGGGAGAACTACGTCATTCTTGTTGCCCTCGTCTACTGCGTCACTGGCATCGGCTACACTTTCGCCATCTTCTTTCAGCCAGGCTCTGCACAGTTGTGGTCTGCGCTGCTTCCGGTCGTTTTGACTCTGATAGCAACTCAGCGGAAGAACACTTTCTTTGCTGACCTGTGCTACACAAAGTGGGCTCTAGAAGGGTTTGTGATGGCAAATGCTCAAAACTACTCCGGGGTGTGGCTGATTACACGGTGCGGTTCGCTGGTCAAGAGCGGCTATGACATCAACGACAAGGCTCTTTGCATAGTGGTTCTTATTGCCAATGGTATAGTTTTCCGCTGCGTGGCATTCTTCTGCATGGTGACCTTCCAGAAGCACTAGAATCGTCCATGACAAGAGAAAAACAACCCCATAATTCTCCTTCTTTGTCTATCCATGTAGCTGATACGTTCATTCATTGATTTATGTGCAATAGAAATGTACATTATAACCTCTTCTGTCGGGCGCCAGGTGTAGATGAGAGCAGACTCTTCAATAGTAGTAAAAAACTGATCAGGATTCATGAATACCCTAAATCTCTATGTATTATAAAAATTGAAAATGTTTTTGCTGTATCTATAAAAGA]




>consensus_6304#0
GCGGCGACCACCACCGTTCCTCTACGAGACTGATCCCGTCGTCGCCATGGCCTCTGTGGC
GGCGCAGCTGGTCGGCGCGGCCCTCACGCTGCTGCTCCTCTCCGTCGCCGCAGCACCCGC
GCGGGCCAACGAAGTGCCACGCCTCTTCCTCCAGGAGATCGCCAGCGACTACGACGATGG
GATCGGAGGCACGGCGGGGGATAAAGGGGCGAAGACCATCGCCGGGAGTCCCATCGTAGC
CGGGGTCATGAACGACCGTCTCAAGGCGCTTACCTCCTCCTTTGCCAAGGCTATTGGCGA
CAAGCTCGACTACTGCATCAAGGACACCGACAAGGAGTGGAATGCTGCGTTCAATTTCTC
CAAGGACACCACCTTCCTCACCAATTGCATGAAGCAGACCAACGGAGACCTGCAGCAGCG
TGTCTGCACAGCCGCAGAGATGAAGTTCTACTTCAACAGTTTGATCGACGCCGGGGAGAA
GAGCGGGGAGATTAATTATGTCAGGCCCAACAAAAACTGCAATCTGTCATCCTGGATGGA
CGGCTGCGAGCCGGGCTGGGCATGCACTGTTGGAAAAGAGCAGAAAATCAATCTGCAGGA
TGCTAAGGATATCCCTTACAGAGCTCTTGACTGCCAAGCTTGTTGCCCTGGCTTCTTCTG
CCCCCATGGTCTCACTTGCATGATACCTTGCCCTCTGGGTGCATACTGCCCGCTGTCCAG
CTTGAACAAAACTACAGGCATCTGTGACCCATACAACTATCAACCACCCGCTGGAAATCC
GAATCATTCTTGCGGTGGTGCTGACAATTGGGCAGACGTGGTTAGCACTGACGATATTTT
CTGCCCACCTGGATTCTACTGCCCGAGCACGACACAGAAACTCCCTTGTAGTAGTGGGTT
TTACTGCAGGAAGGGATCAACCTCACAAACTAGATGCTACAAGAAGAGCTCTTGTCCACC
AAACTCTGCTACACAGGACATTACAATATTTGGTGCATTGTTAGTGGTTGCCTCCTGTTT
AGTGCTCCTGATCATCTACAACTTCTCCGGCCAAATTTTGACGAACCGCGAGAAGAAGCA
AGCAAAATCCCGAGAGGCTGCTGCAAGGTATGCGAGAGAGACTGCGCAAGCTCGAGAGAG
GTGGAAATCAGCAAAGGATGTCGCCAAGAAAGCCGGAACGGGTCTTCAGTCACAATTGTC
TCGCACCTTCTCACGGAAGAAGGCTGCCCAGACACCGAAAGGTGGTGGCGGCGGCGGCAG
CAGCCTGCCTCCAAGCGGAGAAGATGGGGGCGGGAGGAAGAAGAACCTGACCGACATGAT
GCAGTCGCTCGAGGACAACCCGGATAACGATGAAGGATTTAACCTGGAGATAGGAGACAA
GGGCCTGAGGAAGAACATGCCGAAAGGGAAGCAGATGCACAGCCGGAGCCAGATCTTCAA
GTATGCGTATGGCCAGATCGAGAAGGAGAAGGCGATGCAGCAGGAGAACCACAACCTGAC
CTTCTCAGGCGTGATCAGCATGGCCAAGGAGCACGACGTCAGCACGAGGCCCGTCATCGA
GATCGCCTTCAAGGACCTTACGCTGACGCTGAAGGGGAGCAAGAAGAAGCTCTTGAGGTC
CGTGACAGGGAAGCTCAGGCCTGGCCGTGTGGCCGCCGTGATGGGCCCATCTGGCGCGGG
GAAGACCACGTTTCTCAGCGCCATTGCCGGGAAGGCGACTGGCTGCGAGACGTCAGGCAT
GGTGCTCATCAATGGGAAGGTAGAACCCATCCGCGCGTATAAGAGGATCATTGGCTTTGT
CCCCCAGGATGATATCGTTCATGGAAACCTCACCGTCCAAGAAAATCTCTGGTTCAATGC
AAGATGCAGGCTTTCAGCAGACATGTCGAAAGCTGACAAGGTGCTGGTCGTGGAGAGGGT
GATTGAGTCACTGGGACTGCAGGCTGTTCGAGATTCTCTGGTCGGGACAGTGGAACAGCG
CGGCATCTCCGGTGGGCAGCGCAAGCGAGTCAATGTTGGCCTGGAAATGGTGATGGAGCC
ATCGGTGCTGATTCTGGATGAGCCAACGTCCGGTCTGGACAGCGCCTCCTCCCTCCTCCT
GCTCCGCGCCCTTCGCCGTGAAGCTCTCGAGGGCGTCAACATCTCCATGGTTGTTCATCA
ACCCAGCTACACTCTGTACAGGATGTTCGACGACCTGATACTTCTAGCCAAGGGAGGGAT
GACGGTGTACCATGGGCCTGTGAAGAAGGTGGAGGAGTACTTCACGGGGCTGGGCATCAC
CGTGCCGGAGCGAGTGAATCCGCCGGACTACTACATCGACATCCTGGAGGGCATCGTCAA
GCCCACCATGAGCGCCGGCGTCAGCGTCAAGGACCTGCCGCTCAGGTGGATGCTGCACAA
TGGCTACGACGTCCCCCGGGACATGCTGCAGAGCTCCTCCGACTCTGAGTCCTCCTTCCG
AGGGAGCACGAGCCCGGCCTCCGGCGATGCCTCCGTCGCGGCCGAGGTATGGGGCAACGT
CAAGGACATCGTCGGCCAGAAGAAGGACGAGTATGACTACAACAAGAGCACTGAAGATTT
GTCGAACCGCTGCACTCCTGGCATTCTTAGGCAGTACAGGTACTTCCTCGGAAGGTGTGG
CAAGCAAAGGCTCCGTGAAGCGAGAATACAAGGGGTTGATTACCTCATACTCTGCCTTGC
CGGGATATGCCTGGGGACACTGGCCAAAGTCAGTGACGAGACGTTTGGAGCGCTTGGATA
CACATACACAGTCATTGCTGTTTCTCTGCTGTGCAAAATTGGAGCCTTGAGATCATTCGC
GCTTGACAAGATATACTATTGGAGGGAGAGGGCCTCCGGGATGAGCTCTCTCGCCTACTT
CATGTCCAAGGACACCATAGACCACCTCAACACCATCGTCAAGCCCATAGTCTACCTCTC
TATGTTCTACTTCTTCAACAACCCCAGGTCATCCATCTGGGAGAACTACGTCATTCTTGT
TGCCCTCGTCTACTGCGTCACTGGCATCGGCTACACTTTCGCCATCTTCTTTCAGCCAGG
CTCTGCACAGTTGTGGTCTGCGCTGCTTCCGGTCGTTTTGACTCTGATAGCAACTCAGCG
GAAGAACACTTTCTTTGCTGACCTGTGCTACACAAAGTGGGCTCTAGAAGGGTTTGTGAT
GGCAAATGCTCAAAACTACTCCGGGGTGTGGCTGATTACACGGTGCGGTTCGCTGGTCAA
GAGCGGCTATGACATCAACGACAAGGCTCTTTGCATAGTGGTTCTTATTGCCAATGGTAT
AGTTTTCCGCTGCGTGGCATTCTTCTGCATGGTGACCTTCCAGAAGCACTAGAATCGTCC
ATGACAAGAGAAAAACAACCCCATAATTCTCCTTCTTTGTCTATCCATGTAGCTGATACG
TTCATTCATTGATTTATGTGCAATAGAAATGTACATTATAACCTCTTCTGTCGGGCGCCA
GGTGTAGATGAGAGCAGACTCTTCAATAGTAGTAAAAAACTGATCAGGATTCATGAATAC
CCTAAATCTCTATCTATTATAAAAATTGAAAATGTTTTTGCTGTATCTATAAAAGA

consensusID : consensus_6304#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 613
fasta sequence 
                              [AGGGGTGGAATGCTGCGTTCAATTTCTCCAAGGACACCACCTTCCTCACCAATTGCATGAAGCAGACCAACGGTATGCATGCTTGCTTAAGCAAAACGCAGCTTCAAATTATCATCTGTTTGAGGAGCATTTGATAACCACATACTACATCGCCTTGGCCTCGATCGTGAGACGATGCATGACGCATCACGCTGACCAAAATGAGCAGGAGACCTGCAGCAGCGTGTCTGCACAGCCGCAGAGATGAAGTTCTACTTCAACAGTTTGATCGACGCCGGGGAGAAGAGCGGGGAGATTAATTATGTCAGGCCCAACAAAAACTGCAATCTGTCATCCTGGATGGACGGCTGCGAGCCGGGCTGGGCATGCACTGTTGGAAAAGAGCAGAAAATCAATCTGCAGGATGCTAAGGATATCCCTTACAGAGCTCTTGACTGCCAAGCTTGTTGCCCTGGCTTCTTCTGCCCCCATGGTCTCACTTGCATGATACGTGAGTTCCCACGCCTAGCTCTAGCTACTCCCTCCGATCCCAAATATAACCATTTCTGGAATTCAAATTTTTGTACATACTTTATTCCAATAATGGGAATCCAAGCAATTCAAAATCCGGAAT]

[+] EMBL CA766331             [AGGGGTGGAATGCTGCGTTCAATTTCTCCAAGGACACCACCTTCCTCACCAATTGCATGAAGCAGACCAACGGTATGCATGCTTGCTTAAGCAAAACGCAGCTTCAAATTATCATCTGTTTGAGGAGCATTTGATAACCACATACTACATCGCCTTGGCCTCGATCGTGAGACGATGCATGACGCATCACGCTGACCAAAATGAGCAGGAGACCTGCAGCAGCGTGTCTGCACAGCCGCAGAGATGAAGTTCTACTTCAACAGTTTGATCGACGCCGGGGAGAAGAGCGGGGAGATTAATTATGTCAGGCCCAACAAAAACTGCAATCTGTCATCCTGGATGGACGGCTGCGAGCCGGGCTGGGCATGCACTGTTGGAAAAGAGCAGAAAATCAATCTGCAGGATGCTAAGGATATCCCTTACAGAGCTCTTGACTGCCAAGCTTGTTGCCCTGGCTTCTTCTGCCCCCATGGTCTCACTTGCATGATACGTGAGTTCCCACGCCTAGCTCTAGCTACTCCCTCCGATCCCAAATATAACCATTTCTGGAATTCAAATTTTTGTACATACTTTATTCCAATAATGGGAATCCAAGCAATTCAAAATCCGGAAT]




>consensus_6304#1
AGGGGTGGAATGCTGCGTTCAATTTCTCCAAGGACACCACCTTCCTCACCAATTGCATGA
AGCAGACCAACGGTATGCATGCTTGCTTAAGCAAAACGCAGCTTCAAATTATCATCTGTT
TGAGGAGCATTTGATAACCACATACTACATCGCCTTGGCCTCGATCGTGAGACGATGCAT
GACGCATCACGCTGACCAAAATGAGCAGGAGACCTGCAGCAGCGTGTCTGCACAGCCGCA
GAGATGAAGTTCTACTTCAACAGTTTGATCGACGCCGGGGAGAAGAGCGGGGAGATTAAT
TATGTCAGGCCCAACAAAAACTGCAATCTGTCATCCTGGATGGACGGCTGCGAGCCGGGC
TGGGCATGCACTGTTGGAAAAGAGCAGAAAATCAATCTGCAGGATGCTAAGGATATCCCT
TACAGAGCTCTTGACTGCCAAGCTTGTTGCCCTGGCTTCTTCTGCCCCCATGGTCTCACT
TGCATGATACGTGAGTTCCCACGCCTAGCTCTAGCTACTCCCTCCGATCCCAAATATAAC
CATTTCTGGAATTCAAATTTTTGTACATACTTTATTCCAATAATGGGAATCCAAGCAATT
CAAAATCCGGAAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6304#0      GCGGCGACCACCACCGTTCCTCTACGAGACTGATCCCGTCGTCGCCATGGCCTCTGTGGC 60
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      GGCGCAGCTGGTCGGCGCGGCCCTCACGCTGCTGCTCCTCTCCGTCGCCGCAGCACCCGC 120
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      GCGGGCCAACGAAGTGCCACGCCTCTTCCTCCAGGAGATCGCCAGCGACTACGACGATGG 180
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      GATCGGAGGCACGGCGGGGGATAAAGGGGCGAAGACCATCGCCGGGAGTCCCATCGTAGC 240
consensus_6304#1      -----------AGGGGTGGAATGCTGCGTTCAATTTCTCCAAGGACACCACCTTCCTCAC 49
                                  ** * ** **   * *   **   *  *   *  *   ** ** *  *

consensus_6304#0      CGGGGTCATGAACGACCGTCTCAAGGCGCTTACCTCCTCCTTTGCCAAGGCTATTGGCGA 300
consensus_6304#1      CAATTGCATGAA--GCAGACCAACGGTATGCATG-CTTGCTTAAGCAAAACG--CAGCTT 104
                      *     ******   * * *  * **     *   * * ***   ***  *     **  

consensus_6304#0      CAAGCTCGACTACTGCATCAAGGACACC-GACAAGGA-GTGGAATGCTGCGTTCAATTTC 358
consensus_6304#1      CAAATT-ATCATCTGTTTGAGGAGCATTTGATAACCACATACTACATCGCCTTGGCCTCG 163
                      ***  *   *  ***  * * *  **   ** **  *  *   *    ** **    *  

consensus_6304#0      TCCAAG-GACACCACCTTCCTCACCAATTGCATGAAGCAGACCAACGGAGACCTGCAGCA 417
consensus_6304#1      ATCGTGAGACGATGCATGACGCATCACGCTGACCAAAATGAGCA--GGAGACCTGCAGCA 221
                        *  * ***    * *  * ** **     *  **   ** **  **************

consensus_6304#0      GCGTGTCTGCACAGCCGCAGAGATGAAGTTCTACTTCAACAGTTTGATCGACGCCGGGGA 477
consensus_6304#1      GCGTGTCTGCACAGCCGCAGAGATGAAGTTCTACTTCAACAGTTTGATCGACGCCGGGGA 281
                      ************************************************************

consensus_6304#0      GAAGAGCGGGGAGATTAATTATGTCAGGCCCAACAAAAACTGCAATCTGTCATCCTGGAT 537
consensus_6304#1      GAAGAGCGGGGAGATTAATTATGTCAGGCCCAACAAAAACTGCAATCTGTCATCCTGGAT 341
                      ************************************************************

consensus_6304#0      GGACGGCTGCGAGCCGGGCTGGGCATGCACTGTTGGAAAAGAGCAGAAAATCAATCTGCA 597
consensus_6304#1      GGACGGCTGCGAGCCGGGCTGGGCATGCACTGTTGGAAAAGAGCAGAAAATCAATCTGCA 401
                      ************************************************************

consensus_6304#0      GGATGCTAAGGATATCCCTTACAGAGCTCTTGACTGCCAAGCTTGTTGCCCTGGCTTCTT 657
consensus_6304#1      GGATGCTAAGGATATCCCTTACAGAGCTCTTGACTGCCAAGCTTGTTGCCCTGGCTTCTT 461
                      ************************************************************

consensus_6304#0      CTGCCCCCATGGTCTCACTTGCATGATACCTTGCCCTCTGGGTGCATACTGCCCGCTGTC 717
consensus_6304#1      CTGCCCCCATGGTCTCACTTGCATGATACGTGAGTTCCC--ACGCCTAGCTCTAGCTACT 519
                      ***************************** *      *     ** **   *  ***   

consensus_6304#0      CAGCTTGAACAAAACTACAGGCATCTGTGACCCATACAACTATCAACCACCCGCTGGAAA 777
consensus_6304#1      CCCTCCGATCCCAAATATAACCATTTCTGGAATTCA-AATTTTTGTACATACTTT----A 574
                      *     ** *  ** ** *  *** * **      * ** * *    **  *  *    *

consensus_6304#0      TCCGAATCATTCTTGCGGTGGTGCTGACAATTGGGCAGACGTGGTTAGCACTGACGATAT 837
consensus_6304#1      TTCCAATAAT------GGGAATCCAAGCAATTCAAAATCCGGAAT--------------- 613
                      * * *** **      **   * *   *****    *  **   *               

consensus_6304#0      TTTCTGCCCACCTGGATTCTACTGCCCGAGCACGACACAGAAACTCCCTTGTAGTAGTGG 897
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      GTTTTACTGCAGGAAGGGATCAACCTCACAAACTAGATGCTACAAGAAGAGCTCTTGTCC 957
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      ACCAAACTCTGCTACACAGGACATTACAATATTTGGTGCATTGTTAGTGGTTGCCTCCTG 1017
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      TTTAGTGCTCCTGATCATCTACAACTTCTCCGGCCAAATTTTGACGAACCGCGAGAAGAA 1077
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      GCAAGCAAAATCCCGAGAGGCTGCTGCAAGGTATGCGAGAGAGACTGCGCAAGCTCGAGA 1137
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      GAGGTGGAAATCAGCAAAGGATGTCGCCAAGAAAGCCGGAACGGGTCTTCAGTCACAATT 1197
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      GTCTCGCACCTTCTCACGGAAGAAGGCTGCCCAGACACCGAAAGGTGGTGGCGGCGGCGG 1257
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      CAGCAGCCTGCCTCCAAGCGGAGAAGATGGGGGCGGGAGGAAGAAGAACCTGACCGACAT 1317
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      GATGCAGTCGCTCGAGGACAACCCGGATAACGATGAAGGATTTAACCTGGAGATAGGAGA 1377
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      CAAGGGCCTGAGGAAGAACATGCCGAAAGGGAAGCAGATGCACAGCCGGAGCCAGATCTT 1437
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      CAAGTATGCGTATGGCCAGATCGAGAAGGAGAAGGCGATGCAGCAGGAGAACCACAACCT 1497
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      GACCTTCTCAGGCGTGATCAGCATGGCCAAGGAGCACGACGTCAGCACGAGGCCCGTCAT 1557
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      CGAGATCGCCTTCAAGGACCTTACGCTGACGCTGAAGGGGAGCAAGAAGAAGCTCTTGAG 1617
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      GTCCGTGACAGGGAAGCTCAGGCCTGGCCGTGTGGCCGCCGTGATGGGCCCATCTGGCGC 1677
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      GGGGAAGACCACGTTTCTCAGCGCCATTGCCGGGAAGGCGACTGGCTGCGAGACGTCAGG 1737
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      CATGGTGCTCATCAATGGGAAGGTAGAACCCATCCGCGCGTATAAGAGGATCATTGGCTT 1797
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      TGTCCCCCAGGATGATATCGTTCATGGAAACCTCACCGTCCAAGAAAATCTCTGGTTCAA 1857
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      TGCAAGATGCAGGCTTTCAGCAGACATGTCGAAAGCTGACAAGGTGCTGGTCGTGGAGAG 1917
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      GGTGATTGAGTCACTGGGACTGCAGGCTGTTCGAGATTCTCTGGTCGGGACAGTGGAACA 1977
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      GCGCGGCATCTCCGGTGGGCAGCGCAAGCGAGTCAATGTTGGCCTGGAAATGGTGATGGA 2037
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      GCCATCGGTGCTGATTCTGGATGAGCCAACGTCCGGTCTGGACAGCGCCTCCTCCCTCCT 2097
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      CCTGCTCCGCGCCCTTCGCCGTGAAGCTCTCGAGGGCGTCAACATCTCCATGGTTGTTCA 2157
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      TCAACCCAGCTACACTCTGTACAGGATGTTCGACGACCTGATACTTCTAGCCAAGGGAGG 2217
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      GATGACGGTGTACCATGGGCCTGTGAAGAAGGTGGAGGAGTACTTCACGGGGCTGGGCAT 2277
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      CACCGTGCCGGAGCGAGTGAATCCGCCGGACTACTACATCGACATCCTGGAGGGCATCGT 2337
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      CAAGCCCACCATGAGCGCCGGCGTCAGCGTCAAGGACCTGCCGCTCAGGTGGATGCTGCA 2397
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      CAATGGCTACGACGTCCCCCGGGACATGCTGCAGAGCTCCTCCGACTCTGAGTCCTCCTT 2457
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      CCGAGGGAGCACGAGCCCGGCCTCCGGCGATGCCTCCGTCGCGGCCGAGGTATGGGGCAA 2517
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      CGTCAAGGACATCGTCGGCCAGAAGAAGGACGAGTATGACTACAACAAGAGCACTGAAGA 2577
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      TTTGTCGAACCGCTGCACTCCTGGCATTCTTAGGCAGTACAGGTACTTCCTCGGAAGGTG 2637
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      TGGCAAGCAAAGGCTCCGTGAAGCGAGAATACAAGGGGTTGATTACCTCATACTCTGCCT 2697
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      TGCCGGGATATGCCTGGGGACACTGGCCAAAGTCAGTGACGAGACGTTTGGAGCGCTTGG 2757
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      ATACACATACACAGTCATTGCTGTTTCTCTGCTGTGCAAAATTGGAGCCTTGAGATCATT 2817
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      CGCGCTTGACAAGATATACTATTGGAGGGAGAGGGCCTCCGGGATGAGCTCTCTCGCCTA 2877
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      CTTCATGTCCAAGGACACCATAGACCACCTCAACACCATCGTCAAGCCCATAGTCTACCT 2937
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      CTCTATGTTCTACTTCTTCAACAACCCCAGGTCATCCATCTGGGAGAACTACGTCATTCT 2997
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      TGTTGCCCTCGTCTACTGCGTCACTGGCATCGGCTACACTTTCGCCATCTTCTTTCAGCC 3057
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      AGGCTCTGCACAGTTGTGGTCTGCGCTGCTTCCGGTCGTTTTGACTCTGATAGCAACTCA 3117
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      GCGGAAGAACACTTTCTTTGCTGACCTGTGCTACACAAAGTGGGCTCTAGAAGGGTTTGT 3177
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      GATGGCAAATGCTCAAAACTACTCCGGGGTGTGGCTGATTACACGGTGCGGTTCGCTGGT 3237
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      CAAGAGCGGCTATGACATCAACGACAAGGCTCTTTGCATAGTGGTTCTTATTGCCAATGG 3297
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      TATAGTTTTCCGCTGCGTGGCATTCTTCTGCATGGTGACCTTCCAGAAGCACTAGAATCG 3357
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      TCCATGACAAGAGAAAAACAACCCCATAATTCTCCTTCTTTGTCTATCCATGTAGCTGAT 3417
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      ACGTTCATTCATTGATTTATGTGCAATAGAAATGTACATTATAACCTCTTCTGTCGGGCG 3477
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      CCAGGTGTAGATGAGAGCAGACTCTTCAATAGTAGTAAAAAACTGATCAGGATTCATGAA 3537
consensus_6304#1      ------------------------------------------------------------
                                                                                  

consensus_6304#0      TACCCTAAATCTCTATCTATTATAAAAATTGAAAATGTTTTTGCTGTATCTATAAAAGA 3596
consensus_6304#1      -----------------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)