These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6306#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1571 fasta sequence [TTCGTCGCATCTGCTTCAGTAAGTCCAGTGCCGATCACTCCCAGTCTCCCAGGTCCCAAACACTTGCTAGCCTATCTATATATGCGGCCACGAGCAGCACTAGATTTCAGTGAGCAAAGAAGCTTTACTCAGTTAGTGTTTGGTCTTAATTAAACACTGGCCTCCCAATTGATTAAGAGTACTCAGGGGGAGTACTGACTACTGAGAATCTAGCATCGATCAAGCATGCAACAAAAGGAAGCCGGCGAGGAAGCCGTCGTCGTCGTGGGCGCCGGGATCGCCGGCCTCGCCGTGGCTCTCGGGCTGCACAGGAAAGGGGTGAAGTGCTCGGTGCTGGAGTCGTCGCCGGAGCTCCGGGCGTCGGGGTTCGCCTTCGCGACGTGGACGAACGCGTGGCAAGCGCTTGACAACCTTGGGGTGGGCGACAAGATCAGGAAGCTTCATCTGCATCTTCAGGAGTTGCATGTCTTCTCTTCGTCTACGGGAGAGATAACACGAAGAGCGGATCTCACGGTGCAGGGGAAACGAGGACCCAATGAACTGCGCTGCGTCAGGCGGGACTGGCTGCTCCGAGCACTAGAGGAAGAGCTACCAAAAGGCACCATCCGTTACTCCTCCAAGATCGTTGCAATCGAAGAGGATGGCAACGCCAAGATCATACACCTTGCCGACGCCGCAATTCTCAGAGCAAAGGTGCTGATCGGCTGCGACGGGGTGAATTCCGTTGTGGCAAAATGGCTGGGGCTCACAAAGCCGTCGTCCTCGGGGCGCTTGGCGACGAGAGGCCTCGCGCATTACCCTGATGGCCATGGATTGGACCCAAGGTTCAAGATGTTCGTCGGCCATGGCTTCCGTGCTGGCGTGATCCCCTGCAACGAGACTGATGCCTACTGGTTCTTCACCTGGTCTCCTTCCGAACACGAAAGTAATGGCGTCGAGGAGAGCGCGGAAAAGATGAAGCAGTTCGTGCTGACCAAGCTGAGGAGCTCCAAGATCCCAACCGAGGTGCTCGAGGTCGTCGAGAGGAGCAACATAAACGACGTGGTCGCGTCGCCGCTGCGTTTCCGGCCCCCGCTGTCGCTCCTGCTCGCGAGCATCAGCAAGGGGAACGCGTGCGTCGCCGGTGACGCGCTGCACCCGATGACGCCTGACCTTGGCCAGGGCGGCTGCGCGGCGCTCGAGGACGGCGTCGTGCTGGCGAGATGCCTCGGCGACGCCCTTCTCGGTCGGCGGCGGCGCCGCCGAGAGCGAGAGGATCGAGGCGAGTCTACGTGAGTACGCTAGAATCCGGCGGTGGAGGAGCGTCGAGCTCGTCGGGACAGCCTACGTCGTCGGCATCGTGCAGCAGAGTAACAATGCGGTCATCAGCTTTCTGCGGGACAAGTGGTTGGCCGGAGTGCTCGCCGGAAGGCTTCTGAAAATGGCGGACTATGACTGTGGCAAGCTCTAAAACGTGGGAACTCAGTTTTGTACCCAAGTTAATAAGATTACGAAATGGATTTTGTACCCATGTGTCTGAACAAATGATGGAATTGGATTTTGTGATAAAAGCTGCCTCAAAACATGTATGG] [+] EMBL AK106420 [TTCGTCGCATCTGCTTCAGTAAGTCCAGTGCCGATCACTCCCAGTCTCCCAGGTCCCAAACACTTGCTAGCCTATCTATATATGCGGCCACGAGCAGCACTAGATTTCAGTGAGCAAAGAAGCTTTACTCAGTTAGTGTTTGGTCTTAATTAAACACTGGCCTCCCAATTGATTAAGAGTACTCAGGGGGAGTACTGACTACTGAGAATCTAGCATCGATCAAGCATGCAACAAAAGGAAGCCGGCGAGGAAGCCGTCGTCGTCGTGGGCGCCGGGATCGCCGGCCTCGCCGTGGCTCTCGGGCTGCACAGGAAAGGGGTGAAGTGCTCGGTGCTGAAGTCGTCGCCGGAGCTCCGGGCGTCGGGGTTCGCCTTCGCGACGTGGACGAACGCGTGGCAAGCGCTTGACAACCTTGGGGTGGGCGACAAGATCAGGAAGCTTCATCTGCATCTTCAGGAGTTGCATGTCTTCTCTTCGTCTACGGGAGAGATAACACGAAGAGCGGATCTCACGGTGCAGGGGAAACGAGGACCCAATGAACTGCGCTGCGTCAGGCGGGACTGGCTGCTCCGAGCACTAGAGGAAGAGCTACCAAAAGGCACCATCCGTTACTCCTCCAAGATCGTTGCAATCGAAGAGGATGGCAACGCCAAGATCATACACCTTGCCGACGCCGCAATTCTCAGAGCAAAGGTGCTGATCGGCTGCGACGGGGTGAATTCCGTTGTGGCAAAATGGCTGGGGCTCACAAAGCCGTCGTCCTCGGGGCGCTTGGCGACGAGAGGCCTCGCGCATTACCCTGATGGCCATGGATTGGACCCAAGGTTCAAGATGTTCGTCGGCCATGGCTTCCGTGCTGGCGTGATCCCCTGCAACGAGACTGATGCCTACTGGTTCTTCACCTGGTCTCCTTCCGAACACGAAAGTAATGGCGTCGAGGAGAGCGCGGAAAAGATGAAGCAGTTCGTGCTGACCAAGCTGAGGAGCTCCAAGATCCCAACCGAGGTGCTCGAGGTCGTCGAGAGGAGCAACATAAACGACGTGGTCGCGTCGCCGCTGCGTTTCCGGCCCCCGCTGTCGCTCCTGCTCGCGAGCATCAGCAAGGGGAACGCGTGCGTCGCCGGTGACGCGCTGCACCCGATGACGCCTGACCTTGGCCAGGGCGGCTGCGCGGCGCTCGAGGACGGCGTCGTGCTGGCGAGATGCCTCGGCGACGCCCTTCTCGGTCGGCGGCGGCGCCGCCGAGAGCGAGAGGATCGAGGCGAGTCTACGTGAGTACGCTAGAATCCGGCGGTGGAGGAGCGTCGAGCTCGTCGGGACAGCCTACGTCGTCGGCATCGTGCAGCAGAGTAACAATGCGGTCATCAGCTTTCTGCGGGACAAGTGGTTGGCCGGAGTGCTCGCCGGAAGGCTTCTGAAAATGGCGGACTATGACTGTGGCAAGCTCTAAAACGTGGGAACTCAGTTTTGTACCCAAGTTAATAAGATTACGAAATGGATTTTGTACCCATGTGTCTGAACAAATGATGGAATTGGATTTTGTGATAAAAGCTGCCTCAAAACATGTATGG] [+] EMBL CF326665 [ TTTGGTCTTAATTAAACACTGGCCTCCCAATTGATTAAGAGTACTCAGGGGGAGTACTGACTACTGAGAATCTAGCATCGATCAAGCATGCAACAAAAGGAAGCCGGCGAGGAAGCCGTCGTCGTCGTGGGCTCCTGGATCGCCGGCCTCGCCGTGGCTCTCGGGCTGCACAGGAAAGGGGTGAAGTGCTCGGTGCTGGAGTCGTCGCCGGAGCTCCGGGCGTCGGGGTTCGCCTTCGCGACGTGGACGAACGCGTGGCAAGCGCTTGACAACCTTGGGGTGGGCGACAAGATCAGGAAGCTTCATCTGCATCTTCAGGAGTTGCATGTCTTCTCTTCGTCTACGGGAGAGATAACACGAAGAGCGGATCTCACGGTGCAGGGGAAACGAGGACCCAATGAACTGCGCTGCGTCAGGCGGGACTGGCTGCTCCGAGCACTAGAGGAAGAGCTACCAAAAGGCACCATCCGTTACTCCTCCAAGATCGTTGCAATCGAAGAGGATGGCAACGCCAAGATCATACACC ] [+] EMBL CF324628 [ TTTGGTCTTAATTAAACACTGGCCTCCCAATTGATTAAGAGTACTCAGGGGGAGTACTGACTACTGAGAATCTAGCATCGATCAAGCATGCAACAAAAGGAAGCCGGCGAGGAAGCCGTCGTCGTCGTGGGCGCCGGGATCGCCGGCCTCGCCGTGGCTCTCGGGCTGCACAGGAAAGGGGTGAAGTGCTCGGTGCTGGAGTCGTCGCCGGAGCTCCGGGCGTCGGGGTTCGCCTTCGCGACGTGGACGAACGCGTGGCAAGCGCTTGACAACCTTGGGGTGGGCGACAAGATCAGGAAGCTTCATCTGCATCTTCAGGAGTTGCATGTCTTCTCTTCGTCTACGGGAGAGATAACACGAAGAGCGGATCTCACGGTGCAGGGGAAACGAGGACCCAATGAACTGCGCTGCGTCAGGCGGGACTGGCTGCTCCGAGCACTAGAGGAAGAGCTACCA ] [+] EMBL BI811720 [ TCGCCGCTGCGTTTCCGGCCCCCGCTGTCGCTCCTGCTCGCGAGCATCAGCAAGGGGAACGCGTGCTTCGCCGGTGACGCGCTGCACCCGATGACGCCTGACCTTGGCCAGGGC GCTGC CGGCGCTCGAGGACGGCGTCGT CTGGCGAGATGCCTCGGCGACCCCCTTCTCGG CGGCGGCGGCGCCGCCGAGAGCGAGAGGATCGAGGCGAGTCTACGTGAGTACGCTAGAATCCGGC GTGGAGGAGCGTCGAGCTCGTCGGGACAGCCTACGTCGTCGGCATCGTGCAGCAGAGTAAC ATGCGGTCATCAGCTTTCTGCGGGACAAGTGGTTGGCCGGAGTGCTCGCCGGAAGGCTTCTGAAAATGGCGGACTATGACTGTGGCAAGCTCTAAAACGTGGGAACTCAGTTTTGTACCCAAGTTAATAAGATTACGAAATGGATTTTGTACCCATGTGTCTGAAC AATGATGGAATTGGATTTTGTGATAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||