cluster # 6335

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Oryza sativa
cluster # 6335 cluster # 6335 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6335#0 length = 616 sequences # 4

consensusID : consensus_6335#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 616
fasta sequence

                              [ATTGAGCACAGCAACTACCCAAGCCATCCAGAAGGCTAAGGATGGGATCTCGACAAGCAGCAGTAACAGCGGTGATCTCGTGGAGCAATGTGTTCAGTGCCCAGCAAGATTTTCCACCGTGGGGGCCTTAATCGAGCATTGCGAAAAGTCCCATCAGAGCAACTCGCAATCAAGTCGTAGCAGAGTGACGGTCGATGTCTGCCCGAAATGCAGCAAGGCATTTCGAGATCCAGTGTTGCTTGTGGAGCATGTTGAGAGGGACCATGGAGGAACGTCAAGAGCGTAGATCTGCTTATGTTTACTGTACCTGTGTAACCTGTAATTTGCTTCTCATTGGTCAATGGTCATCACACTCAATAGGATTTGGTTGGATTGTGCTCTATTATTACGGTTGGGTTCAAAATGTGCCCATGAAAGAAGGTATAGTTTGTTGGCTGTTTCAAGGCAAGCCATTGTGAATTGAACCTCATTCTAGACACCAGGAAATCAAATTTCTGATTAGTTAAAACAATGCGTCGTTTAGATGGCTATGCTGTTGCAAGTTACAAATATTGCCTTCTACCAGTTTGTTAATGGTGAAATGGAATTCATAACCTAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK062388             [ATTGAGCACAGCAACTACCCAAGCCATCCAGAAGGCTAAGGATGGGATCTCGACAAGCAGCAGTAACAGCGGTGATCTCGTGGAGCAATGTGTTCAGTGCCCAGCAAGATTTTCCACCGTGGGGGCCTTAATCGAGCATTGCGAAAAGTCCCATCAGAGCAACTCGCAATCAAGTCGTAGCAGAGTGACGGTCGATGTCTGCCCGAAATGCAGCAAGGCATTTCGAGATCCAGTGTTGCTTGTGGAGCATGTTGAGAGGGACCATGGAGGAACGTCAAGAGCGTAGATCTGCTTATGTTTACTGTACCTGTGTAACCTGTAATTTGCTTCTCATTGGTCAATGGTCATCACACTCAATAGGATTTGGTTGGATTGTGCTCTATTATTACGGTTGGGTTCAAAATGTGCCCATGAAAGAAGGTATAGTTTGTTGGCTGTTTCAAGGCAAGCCATTGTGAATTGAACCTCATTCTAGACACCAGGAAATCAAATTT                                                                                                                          ]
[-] EMBL CF309835             [                                                                AACAGCGGTGATCTCGTGGAGCAATGTGTTCAGTGCCCAGCAAGATTTTCCACCGTGGGGGCCTTAATCGAGCATTGCGAAAAGTCCCATCAGAGCAACTCGCAATCAAGTCGTAGCAGAGTGACGGTCGATGTCTGCCCGAAATGCAGCAAGGCATTTCGAGATCCAGTGTTGCTTGTGGAGCATGTTGAGAGGGACCATGGAGGAACGTCAAGAGCGTAGATCTGCTTATGTTTACTGTACCTGTGTAACCTGTAATTTGCTTCTCATTGGTCAATGGTCATCACACTCAATAGGATTTGGTTGGATTGTGCTCTATTATTACGGTTGGGTTCAAAATGTGCCCATGAAAGAAGGTATAGTTTGTTGGCTGTTTCAAGGCAAGCCATTGTGAATTGAACCTCATTCTAGACACCAGGAAATCAAATTTCTGATTAGTTAAAAa                                                                                                           ]
[+] EMBL AU088671             [                                                                                                                                                                                                                                                                                                                      TGTAACCTGTAATTTGCTTCTCATTGGTCAATGGTCATCACACTCAATAGGATTTGGTTGGATTGTGCTCTATTATTACGGTTGGGTTCAAAATGTGCCCNTNNAAGAAGGTATAGTTTGTTGGCTGTTTCAAGGCAAGCCATTGTGAATTGAACCTCATTCTAGACNCCAGGAANTCNAATTTCTGATTAGTTNAAACAATGCGTCGTTTAGATGGCTATGCTGTTGCAAGTTACAAATATTGCCTTCTACCAGTTTGTTAATGGTGAAATGGAATTCATAACCTAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU095992             [                                                                                                                                                                                                                                                                                                                           CCTGTAATTTGNTTCTCATTGGTCAATGGTCNTCACACTCANTAGGATTTGGTTGGATTGTGCTCTATTATTACGGTTGGGTTCAAAATGTGCCCATGAAAGAAGGTATAGTTTGTTGGCTGTTTCAAGGCAAGCCATTGTGAATTGAACCTCATTCTAGNCACCAGGAAATCAAATTTCTGATTAGTTAAAACAATGCGTCGTTTAGATGGNTATGCTGTTGCAAGTTACAAATATTGCCTTCTACCAGTTTGTTAATGGTGAAATGGAATTCATAACCTAAAAAAAAAAAAAAAAAAAA]




>consensus_6335#0
ATTGAGCACAGCAACTACCCAAGCCATCCAGAAGGCTAAGGATGGGATCTCGACAAGCAG
CAGTAACAGCGGTGATCTCGTGGAGCAATGTGTTCAGTGCCCAGCAAGATTTTCCACCGT
GGGGGCCTTAATCGAGCATTGCGAAAAGTCCCATCAGAGCAACTCGCAATCAAGTCGTAG
CAGAGTGACGGTCGATGTCTGCCCGAAATGCAGCAAGGCATTTCGAGATCCAGTGTTGCT
TGTGGAGCATGTTGAGAGGGACCATGGAGGAACGTCAAGAGCGTAGATCTGCTTATGTTT
ACTGTACCTGTGTAACCTGTAATTTGCTTCTCATTGGTCAATGGTCATCACACTCAATAG
GATTTGGTTGGATTGTGCTCTATTATTACGGTTGGGTTCAAAATGTGCCCATGAAAGAAG
GTATAGTTTGTTGGCTGTTTCAAGGCAAGCCATTGTGAATTGAACCTCATTCTAGACACC
AGGAAATCAAATTTCTGATTAGTTAAAACAATGCGTCGTTTAGATGGCTATGCTGTTGCA
AGTTACAAATATTGCCTTCTACCAGTTTGTTAATGGTGAAATGGAATTCATAACCTAAAA
AAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case