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Oryza sativa
cluster # 6339 cluster # 6339       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6339#0 length = 1646 sequences # 2  
consensus_6339#1 length = 735 sequences # 1  
consensus_6339#2 length = 399 sequences # 1  

consensusID : consensus_6339#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1646
fasta sequence
                              [CCCACTAATCCCGGTGCCTTCTTGATCCCACCGATCCCCGTGCTTTCTTCTCTTCGGCATCGCCACGAAGCGGAGGGTGCCATCGCAGCAGCCATCGCCGACGAGCGGCTCACGGTCACTGCGGCCTCGGCAACGTCCGGCGATCGTCGTCGATCCTTACCTTACTCCCTCACGCCCCCTAGCTGTCTCCTCGAGAAGAATCCTGCTTAAGTTGATTTACCTCCGGGTGTTTACGGTCTTTCAAATTGCTAAGCATAATCTTGAACTTTCCAAGAAAAAAAACAGGCCTGCATTAACTAGTGCCAGGGCAGCAATAATGGATTTGTGCGACGACACTCATTTCCCATGGGAGGGGTCCCATACTATTGTTGGCAGCAAGCGGAAAGCTAAGGATTTAATGGCAAAAATCTGAACTTGTTTAATGGAACTTATAAGATGGTGGAAACCACAGTTGATGTTATGATAAGAAAAGGAACAAACATGAGACTCGAAAGCTACGAGTTTTTGAGTGATTTCAAGCATGGCAACGCTGTGGTACTCCTGGACTACACAGAGTCCGGAAACAAGGGGAGTTTCATCGTCACACAAGTTGATGGGTCATTCACTGCCTGGTTTGAAACAGGTGGAAAAGAGCTCTGCTTTGACTCATCTGGTCATATTACTCAGTTATTTAAAGACATGATTGTCGATTTTTACGATCTGACCTGGAGTTTGCACAAGAGGCACTTAGTCATGCAGAATTTTGTAAAGGAAAATATATACGTCAAAATCTTTGATGGCGTACCCAAACTTATGATTCTACTAACTGAAGTTAAATTGGTTGATCAGCTAGGGCCATTCAAACAGGACTGGAGTCATGTCCAAGGCCTCATGACTTGGTGTAAAGAACAATCTGGTTTAAAAATGGACTTTCTTACCAAGAGTTTCTATGATTTCATCGGATCTACCGACTGCACAGTAATCAAGCTGAGAAACTACCCTGATGATTGGGATGAAAAAAAGAAAGGTGATTATTTGCTCACACTCGCAGAAGTAAACCACGGAGTTCTTAAAGATAAGTTGAAGAGTAGGGATGATTTTCATTGGCCGTTTGTGAAGCTGCCTAAGCTGGAGCAGAACTTACCACCAATGTTACAGCAAATTCTTAGTGGGGAGAGACAGATGAAAAGAAAGTTCGACGTGACATTCTTTTGTGATTATATCAACCTCTTGAGAAACTCCTACAAGAAATTCAATGAATTACCAGAAAATGTTAAGGCTTTATGCATAAACCAGGATGGCTTCATTAAACTGATAGATGGGTGGTCTCCTGAGTTTTGGACCAAGATCTACGAGAAAATTGGGTGGCCAGATTATAATATCTGGAAGTGGCCTTGTAAAAAATAGCTTTAGTGCTTTGCATTTGACCAGAACACTGCTTGATCTCAATGATGGCGATGCCGGTGCCCGCGCTGACATTCTCAGGACATATGGTGCTGTTCTGCAGGTCCGATCCTTAGATGGCTCCTGTTAGGAGTTTTTGGTTCTTAGAATTATGTCAGATGCTATCTCGAAACTCTCAAGTAATTTTTTGTCCTCCTGCATGAAGCAAAACTTAGTGTATTGGTTGAAAATCTGGCATGATTGAATGGAGAACTATCGAGATT]

[+] EMBL AK064171             [CCCACTAATCCCGGTGCCTTCTTGATCCCACCGATCCCCGTGCTTTCTTCTCTTCGGCATCGCCACGAAGCGGAGGGTGCCATCGCAGCAGCCATCGCCGACGAGCGGCTCACGGTCACTGCGGCCTCGGCAACGTCCGGCGATCGTCGTCGATCCTTACCTTACTCCCTCACGCCCCCTAGCTGTCTCCTCGAGAAGAATCCTGCTTAAGTTGATTTACCTCCGGGTGTTTACGGTCTTTCAAATTGCTAAGCATAATCTTGAACTTTCCAAGAAAAAAAACAGGCCTGCATTAACTAGTGCCAGGGCAGCAATAATGGATTTGTGCGACGACACTCATTTCCCATGGGAGGGGTCCCATACTATTGTTGGCAGCAAGCGGAAAGCTAAGGATTTAATGGCAAAAATCTGAACTTGTTTAATGGAACTTATAAGATGGTGGAAACCACAGTTGATGTTATGATAAGAAAAGGAACAAACATGAGACTCGAAAGCTACGAGTTTTTGAGTGATTTCAAGCATGGCAACGCTGTGGTACTCCTGGACTACACAGAGTCCGGAAACAAGGGGAGTTTCATCGTCACACAAGTTGATGGGTCATTCACTGCCTGGTTTGAAACAGGTGGAAAAGAGCTCTGCTTTGACTCATCTGGTCATATTACTCAGTTATTTAAAGACATGATTGTCGATTTTTACGATCTGACCTGGAGTTTGCACAAGAGGCACTTAGTCATGCAGAATTTTGTAAAGGAAAATATATACGTCAAAATCTTTGATGGCGTACCCAAACTTATGATTCTACTAACTGAAGTTAAATTGGTTGATCAGCTAGGGCCATTCAAACAGGACTGGAGTCATGTCCAAGGCCTCATGACTTGGTGTAAAGAACAATCTGGTTTAAAAATGGACTTTCTTACCAAGAGTTTCTATGATTTCATCGGATCTACCGACTGCACAGTAATCAAGCTGAGAAACTACCCTGATGATTGGGATGAAAAAAAGAAAGGTGATTATTTGCTCACACTCGCAGAAGTAAACCACGGAGTTCTTAAAGATAAGTTGAAGAGTAGGGATGATTTTCATTGGCCGTTTGTGAAGCTGCCTAAGCTGGAGCAGAACTTACCACCAATGTTACAGCAAATTCTTAGTGGGGAGAGACAGATGAAAAGAAAGTTCGACGTGACATTCTTTTGTGATTATATCAACCTCTTGAGAAACTCCTACAAGAAATTCAATGAATTACCAGAAAATGTTAAGGCTTTATGCATAAACCAGGATGGCTTCATTAAACTGATAGATGGGTGGTCTCCTGAGTTTTGGACCAAGATCTACGAGAAAATTGGGTGGCCAGATTATAATATCTGGAAGTGGCCTTGTAAAAAATAGCTTTAGTGCTTTGCATTTGACCAGAACACTGCTTGATCTCAATGATGGCGATGCCGGTGCCCGCGCTGACATTCTCAGGACATATGGTGCTGTTCTGCAGGTCCGATCCTTAGATGGCTCCTGTTAGGAGTTTTTGGTTCTTAGAATTATGTCAGATGCTATCTCGAAACTCTCAAGTAATTTTTTGTCCTCCTGCATGAAGCAAAACTTAGTGTATTGGTTGAAAATCTGGCATGATTGAATGGAGAACTATCGAGATT]
[+] EMBL CF292837             [                                                         CATCGCCACGAAGCGGAGGGTGCCATCGCAGCAGCCATCGCCGACGAGCGGCTCACGGTCACTGCGGCCTCGGCAACGTCCGGCGATCGTCGTCGATCCTTACCTTACTCCCTCACGCCCCCTAGCTGTCTCCTCGAGAAGAATCCTGCTTAAGTTGATTTACCTCCGGGTGTTTACGGTCTTTCAAATTGCTAAGCATAATCTTGAACTTTCCAAGAAAAAAAACAGGCCTGCATTAACTAGTGCCAGGGCAGCAATAATGGATTTGTGCGACGACACTCATTTCCCATGGGAGAGGTCCCATACTATTGTTGGCAGCAAGCGGAAAGCTAAGGATTTAATGGCAAAAATCTGAACTTGTCTAATGGAACTTATAAGATGGTGGAAACCACAGTTGATGTTATGATAAGAAAAGGAACAAACATGAGACTCG AAGCCACGAGTTTTTGAGTGATTTCAAGCATGGCAACGCTGTGGTACTCCTGGACTACACAGAGTCCGGAAAC AGGGGAGTTTCATCGTCACACAAGTTGATGGGTCATTCACTGCCTGGTTTGAAACAGGTGGAAAAGAGCTCTGCTTTGACTCATCTGGTCATATTACTCAGTTATTTAAAGACATGATTGTCGATTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]


>consensus_6339#0 CCCACTAATCCCGGTGCCTTCTTGATCCCACCGATCCCCGTGCTTTCTTCTCTTCGGCAT CGCCACGAAGCGGAGGGTGCCATCGCAGCAGCCATCGCCGACGAGCGGCTCACGGTCACT GCGGCCTCGGCAACGTCCGGCGATCGTCGTCGATCCTTACCTTACTCCCTCACGCCCCCT AGCTGTCTCCTCGAGAAGAATCCTGCTTAAGTTGATTTACCTCCGGGTGTTTACGGTCTT TCAAATTGCTAAGCATAATCTTGAACTTTCCAAGAAAAAAAACAGGCCTGCATTAACTAG TGCCAGGGCAGCAATAATGGATTTGTGCGACGACACTCATTTCCCATGGGAGGGGTCCCA TACTATTGTTGGCAGCAAGCGGAAAGCTAAGGATTTAATGGCAAAAATCTGAACTTGTTT AATGGAACTTATAAGATGGTGGAAACCACAGTTGATGTTATGATAAGAAAAGGAACAAAC ATGAGACTCGAAAGCTACGAGTTTTTGAGTGATTTCAAGCATGGCAACGCTGTGGTACTC CTGGACTACACAGAGTCCGGAAACAAGGGGAGTTTCATCGTCACACAAGTTGATGGGTCA TTCACTGCCTGGTTTGAAACAGGTGGAAAAGAGCTCTGCTTTGACTCATCTGGTCATATT ACTCAGTTATTTAAAGACATGATTGTCGATTTTTACGATCTGACCTGGAGTTTGCACAAG AGGCACTTAGTCATGCAGAATTTTGTAAAGGAAAATATATACGTCAAAATCTTTGATGGC GTACCCAAACTTATGATTCTACTAACTGAAGTTAAATTGGTTGATCAGCTAGGGCCATTC AAACAGGACTGGAGTCATGTCCAAGGCCTCATGACTTGGTGTAAAGAACAATCTGGTTTA AAAATGGACTTTCTTACCAAGAGTTTCTATGATTTCATCGGATCTACCGACTGCACAGTA ATCAAGCTGAGAAACTACCCTGATGATTGGGATGAAAAAAAGAAAGGTGATTATTTGCTC ACACTCGCAGAAGTAAACCACGGAGTTCTTAAAGATAAGTTGAAGAGTAGGGATGATTTT CATTGGCCGTTTGTGAAGCTGCCTAAGCTGGAGCAGAACTTACCACCAATGTTACAGCAA ATTCTTAGTGGGGAGAGACAGATGAAAAGAAAGTTCGACGTGACATTCTTTTGTGATTAT ATCAACCTCTTGAGAAACTCCTACAAGAAATTCAATGAATTACCAGAAAATGTTAAGGCT TTATGCATAAACCAGGATGGCTTCATTAAACTGATAGATGGGTGGTCTCCTGAGTTTTGG ACCAAGATCTACGAGAAAATTGGGTGGCCAGATTATAATATCTGGAAGTGGCCTTGTAAA AAATAGCTTTAGTGCTTTGCATTTGACCAGAACACTGCTTGATCTCAATGATGGCGATGC CGGTGCCCGCGCTGACATTCTCAGGACATATGGTGCTGTTCTGCAGGTCCGATCCTTAGA TGGCTCCTGTTAGGAGTTTTTGGTTCTTAGAATTATGTCAGATGCTATCTCGAAACTCTC AAGTAATTTTTTGTCCTCCTGCATGAAGCAAAACTTAGTGTATTGGTTGAAAATCTGGCA TGATTGAATGGAGAACTATCGAGATT



consensusID : consensus_6339#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 735
fasta sequence
                              [CTGAGAAACTACCGTGATGATTGGGATGAAAAAAAGAAAGGTGATTATTTGCTCACACTCGCAGAAGTAAACCCCGGAGTTCTTAAAGATAAGTTGAAGAGTAGGGATGATTTTCACTGGCCGTTTGTGAAGCTGCCTAAGTTGGAGCAGAACTTACCACCAATGTTACAGCAAATTCTTAGTGGGGAGAGACAGATGAAAAGAAAGTTCGACGTGACATTCTTTTGTGATTATATCAACCTCTTGAGAAACTCCTACAAGAAATTCAATGAATTACCAGAAAATGTTAAGGCTTTATGCATAAACCAGGATGGCTTCATTAAACTGATAGATGGGTGGTCTCATGAGTTTTGGACCAAGATCTACGAGAAAATTGGGTGGCCAGATTATAATATCTGGAAGTGGCCTTGTAAAAAATAGCTTTAGTGCTTTGCATTTGACCAGTGAGTACTGCATTAATTCTTAATGAACACTGCTTGATCTCAATGATGGCGATGCCGGTGCCCGCGCTGACATTCTCAGGACATATGGTGCTGTTCTGCAGGTCCGATCCCTAGATGGCTCCTGTTAGGAGTTTTTGGTTCTTAGAATTATGTTAGATGCTATCTCGAAACTCTCAAGTAATTTTTTGTCCTCACTGCACGAAGCAAACCTTAGTGTATTGGGTGAAAATCTGGCATGATTGAATGGAGATCTATCGAGAACGGTACGGAAAATGAGGGGGGGCCCGGACCC]

[-] EMBL CB673747             [CTGAGAAACTACCGTGATGATTGGGATGAAAAAAAGAAAGGTGATTATTTGCTCACACTCGCAGAAGTAAACCCCGGAGTTCTTAAAGATAAGTTGAAGAGTAGGGATGATTTTCACTGGCCGTTTGTGAAGCTGCCTAAGTTGGAGCAGAACTTACCACCAATGTTACAGCAAATTCTTAGTGGGGAGAGACAGATGAAAAGAAAGTTCGACGTGACATTCTTTTGTGATTATATCAACCTCTTGAGAAACTCCTACAAGAAATTCAATGAATTACCAGAAAATGTTAAGGCTTTATGCATAAACCAGGATGGCTTCATTAAACTGATAGATGGGTGGTCTCATGAGTTTTGGACCAAGATCTACGAGAAAATTGGGTGGCCAGATTATAATATCTGGAAGTGGCCTTGTAAAAAATAGCTTTAGTGCTTTGCATTTGACCAGTGAGTACTGCATTAATTCTTAATGAACACTGCTTGATCTCAATGATGGCGATGCCGGTGCCCGCGCTGACATTCTCAGGACATATGGTGCTGTTCTGCAGGTCCGATCCCTAGATGGCTCCTGTTAGGAGTTTTTGGTTCTTAGAATTATGTTAGATGCTATCTCGAAACTCTCAAGTAATTTTTTGTCCTCACTGCACGAAGCAAACCTTAGTGTATTGGGTGAAAATCTGGCATGATTGAATGGAGATCTATCGAGAACGGTACGGAAAATGAGGGGGGGCCCGGACCC]


>consensus_6339#1 CTGAGAAACTACCGTGATGATTGGGATGAAAAAAAGAAAGGTGATTATTTGCTCACACTC GCAGAAGTAAACCCCGGAGTTCTTAAAGATAAGTTGAAGAGTAGGGATGATTTTCACTGG CCGTTTGTGAAGCTGCCTAAGTTGGAGCAGAACTTACCACCAATGTTACAGCAAATTCTT AGTGGGGAGAGACAGATGAAAAGAAAGTTCGACGTGACATTCTTTTGTGATTATATCAAC CTCTTGAGAAACTCCTACAAGAAATTCAATGAATTACCAGAAAATGTTAAGGCTTTATGC ATAAACCAGGATGGCTTCATTAAACTGATAGATGGGTGGTCTCATGAGTTTTGGACCAAG ATCTACGAGAAAATTGGGTGGCCAGATTATAATATCTGGAAGTGGCCTTGTAAAAAATAG CTTTAGTGCTTTGCATTTGACCAGTGAGTACTGCATTAATTCTTAATGAACACTGCTTGA TCTCAATGATGGCGATGCCGGTGCCCGCGCTGACATTCTCAGGACATATGGTGCTGTTCT GCAGGTCCGATCCCTAGATGGCTCCTGTTAGGAGTTTTTGGTTCTTAGAATTATGTTAGA TGCTATCTCGAAACTCTCAAGTAATTTTTTGTCCTCACTGCACGAAGCAAACCTTAGTGT ATTGGGTGAAAATCTGGCATGATTGAATGGAGATCTATCGAGAACGGTACGGAAAATGAG GGGGGGCCCGGACCC



consensusID : consensus_6339#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 399
fasta sequence
                              [ACCAAGATCTACGAGAAAATTGGGTGGCCAGATTATAATATCTGGAAGTGGCCTTGTAAAAAATAGCTTTAGTGCTTTGCATTTGACCAGTCCTTGATCTAAAAAAAAAGTTCAATGGGCTTTGGAAAAATCTAATACTTTCTCCGTTTCACAATGAACACTGCTTGATCTCAATGATGGCGATGCCGGTGCCCGCGCTGACATTCTCAGGACATATGGTGCTATTCTGCAGGTCCGATCCTAAAATGGCTCCTGTTAGGAGTTTTTGGTTCTTAGAATTATGTTAGATGCTATCTCGAAACTCTCAAGTAATTTTTTGTCCTCCTGCATGAAGCAAAACTTAGTGTATTGGTTGAAAATCTGGCATGATTGAATGAAAAACTATCGAGATTCAAAAAA]

[-] EMBL CF292838             [ACCAAGATCTACGAGAAAATTGGGTGGCCAGATTATAATATCTGGAAGTGGCCTTGTAAAAAATAGCTTTAGTGCTTTGCATTTGACCAGTCCTTGATCTAAAAAAAAAGTTCAATGGGCTTTGGAAAAATCTAATACTTTCTCCGTTTCACAATGAACACTGCTTGATCTCAATGATGGCGATGCCGGTGCCCGCGCTGACATTCTCAGGACATATGGTGCTATTCTGCAGGTCCGATCCTAAAATGGCTCCTGTTAGGAGTTTTTGGTTCTTAGAATTATGTTAGATGCTATCTCGAAACTCTCAAGTAATTTTTTGTCCTCCTGCATGAAGCAAAACTTAGTGTATTGGTTGAAAATCTGGCATGATTGAATGAAAAACTATCGAGATTCAAAAAA]


>consensus_6339#2 ACCAAGATCTACGAGAAAATTGGGTGGCCAGATTATAATATCTGGAAGTGGCCTTGTAAA AAATAGCTTTAGTGCTTTGCATTTGACCAGTCCTTGATCTAAAAAAAAAGTTCAATGGGC TTTGGAAAAATCTAATACTTTCTCCGTTTCACAATGAACACTGCTTGATCTCAATGATGG CGATGCCGGTGCCCGCGCTGACATTCTCAGGACATATGGTGCTATTCTGCAGGTCCGATC CTAAAATGGCTCCTGTTAGGAGTTTTTGGTTCTTAGAATTATGTTAGATGCTATCTCGAA ACTCTCAAGTAATTTTTTGTCCTCCTGCATGAAGCAAAACTTAGTGTATTGGTTGAAAAT CTGGCATGATTGAATGAAAAACTATCGAGATTCAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6339#0      CCCACTAATCCCGGTGCCTTCTTGATCCCACCGATCCCCGTGCTTTCTTCTCTTCGGCAT 60
consensus_6339#1      ------------------------------------------------------------
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      CGCCACGAAGCGGAGGGTGCCATCGCAGCAGCCATCGCCGACGAGCGGCTCACGGTCACT 120
consensus_6339#1      ------------------------------------------------------------
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      GCGGCCTCGGCAACGTCCGGCGATCGTCGTCGATCCTTACCTTACTCCCTCACGCCCCCT 180
consensus_6339#1      ------------------------------------------------------------
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      AGCTGTCTCCTCGAGAAGAATCCTGCTTAAGTTGATTTACCTCCGGGTGTTTACGGTCTT 240
consensus_6339#1      ------------------------------------------------------------
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      TCAAATTGCTAAGCATAATCTTGAACTTTCCAAGAAAAAAAACAGGCCTGCATTAACTAG 300
consensus_6339#1      ------------------------------------------------------------
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      TGCCAGGGCAGCAATAATGGATTTGTGCGACGACACTCATTTCCCATGGGAGGGGTCCCA 360
consensus_6339#1      ------------------------------------------------------------
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      TACTATTGTTGGCAGCAAGCGGAAAGCTAAGGATTTAATGGCAAAAATCTGAACTTGTTT 420
consensus_6339#1      ------------------------------------------------------------
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      AATGGAACTTATAAGATGGTGGAAACCACAGTTGATGTTATGATAAGAAAAGGAACAAAC 480
consensus_6339#1      ------------------------------------------------------------
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      ATGAGACTCGAAAGCTACGAGTTTTTGAGTGATTTCAAGCATGGCAACGCTGTGGTACTC 540
consensus_6339#1      ------------------------------------------------------------
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      CTGGACTACACAGAGTCCGGAAACAAGGGGAGTTTCATCGTCACACAAGTTGATGGGTCA 600
consensus_6339#1      ------------------------------------------------------------
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      TTCACTGCCTGGTTTGAAACAGGTGGAAAAGAGCTCTGCTTTGACTCATCTGGTCATATT 660
consensus_6339#1      ------------------------------------------------------------
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      ACTCAGTTATTTAAAGACATGATTGTCGATTTTTACGATCTGACCTGGAGTTTGCACAAG 720
consensus_6339#1      ------------------------------------------------------------
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      AGGCACTTAGTCATGCAGAATTTTGTAAAGGAAAATATATACGTCAAAATCTTTGATGGC 780
consensus_6339#1      ------------------------------------------------------------
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      GTACCCAAACTTATGATTCTACTAACTGAAGTTAAATTGGTTGATCAGCTAGGGCCATTC 840
consensus_6339#1      ------------------------------------------------------------
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      AAACAGGACTGGAGTCATGTCCAAGGCCTCATGACTTGGTGTAAAGAACAATCTGGTTTA 900
consensus_6339#1      ------------------------------------------------------------
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      AAAATGGACTTTCTTACCAAGAGTTTCTATGATTTCATCGGATCTACCGACTGCACAGTA 960
consensus_6339#1      ------------------------------------------------------------
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      ATCAAGCTGAGAAACTACCCTGATGATTGGGATGAAAAAAAGAAAGGTGATTATTTGCTC 1020
consensus_6339#1      ------CTGAGAAACTACCGTGATGATTGGGATGAAAAAAAGAAAGGTGATTATTTGCTC 54
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      ACACTCGCAGAAGTAAACCACGGAGTTCTTAAAGATAAGTTGAAGAGTAGGGATGATTTT 1080
consensus_6339#1      ACACTCGCAGAAGTAAACCCCGGAGTTCTTAAAGATAAGTTGAAGAGTAGGGATGATTTT 114
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      CATTGGCCGTTTGTGAAGCTGCCTAAGCTGGAGCAGAACTTACCACCAATGTTACAGCAA 1140
consensus_6339#1      CACTGGCCGTTTGTGAAGCTGCCTAAGTTGGAGCAGAACTTACCACCAATGTTACAGCAA 174
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      ATTCTTAGTGGGGAGAGACAGATGAAAAGAAAGTTCGACGTGACATTCTTTTGTGATTAT 1200
consensus_6339#1      ATTCTTAGTGGGGAGAGACAGATGAAAAGAAAGTTCGACGTGACATTCTTTTGTGATTAT 234
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      ATCAACCTCTTGAGAAACTCCTACAAGAAATTCAATGAATTACCAGAAAATGTTAAGGCT 1260
consensus_6339#1      ATCAACCTCTTGAGAAACTCCTACAAGAAATTCAATGAATTACCAGAAAATGTTAAGGCT 294
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      TTATGCATAAACCAGGATGGCTTCATTAAACTGATAGATGGGTGGTCTCCTGAGTTTTGG 1320
consensus_6339#1      TTATGCATAAACCAGGATGGCTTCATTAAACTGATAGATGGGTGGTCTCATGAGTTTTGG 354
consensus_6339#2      ------------------------------------------------------------
                                                                                  

consensus_6339#0      ACCAAGATCTACGAGAAAATTGGGTGGCCAGATTATAATATCTGGAAGTGGCCTTGTAAA 1380
consensus_6339#1      ACCAAGATCTACGAGAAAATTGGGTGGCCAGATTATAATATCTGGAAGTGGCCTTGTAAA 414
consensus_6339#2      ACCAAGATCTACGAGAAAATTGGGTGGCCAGATTATAATATCTGGAAGTGGCCTTGTAAA 60
                      ************************************************************

consensus_6339#0      AAATAGCTTTAGTGCTTTGCATTTGACCAG------------------------------ 1410
consensus_6339#1      AAATAGCTTTAGTGCTTTGCATTTGACCAGTGAGTACTGCATTAA--------------- 459
consensus_6339#2      AAATAGCTTTAGTGCTTTGCATTTGACCAGTCCTTGATCTAAAAAAAAAGTTCAATGGGC 120
                      ******************************                              

consensus_6339#0      ------------------------------------AACACTGCTTGATCTCAATGATGG 1434
consensus_6339#1      ---------------------------TTCTTAATGAACACTGCTTGATCTCAATGATGG 492
consensus_6339#2      TTTGGAAAAATCTAATACTTTCTCCGTTTCACAATGAACACTGCTTGATCTCAATGATGG 180
                                                          ************************

consensus_6339#0      CGATGCCGGTGCCCGCGCTGACATTCTCAGGACATATGGTGCTGTTCTGCAGGTCCGATC 1494
consensus_6339#1      CGATGCCGGTGCCCGCGCTGACATTCTCAGGACATATGGTGCTGTTCTGCAGGTCCGATC 552
consensus_6339#2      CGATGCCGGTGCCCGCGCTGACATTCTCAGGACATATGGTGCTATTCTGCAGGTCCGATC 240
                      ******************************************* ****************

consensus_6339#0      CTTAGATGGCTCCTGTTAGGAGTTTTTGGTTCTTAGAATTATGTCAGATGCTATCTCGAA 1554
consensus_6339#1      CCTAGATGGCTCCTGTTAGGAGTTTTTGGTTCTTAGAATTATGTTAGATGCTATCTCGAA 612
consensus_6339#2      CTAAAATGGCTCCTGTTAGGAGTTTTTGGTTCTTAGAATTATGTTAGATGCTATCTCGAA 300
                      *  * *************************************** ***************

consensus_6339#0      ACTCTCAAGTAATTTTTTGTCCTC-CTGCATGAAGCAAAACTTAGTGTATTGGTTGAAAA 1613
consensus_6339#1      ACTCTCAAGTAATTTTTTGTCCTCACTGCACGAAGCAAACCTTAGTGTATTGGGTGAAAA 672
consensus_6339#2      ACTCTCAAGTAATTTTTTGTCCTC-CTGCATGAAGCAAAACTTAGTGTATTGGTTGAAAA 359
                      ************************ ***** ******** ************* ******

consensus_6339#0      TCTGGCATGATTGAATGGAGAACTATCGAGATT--------------------------- 1646
consensus_6339#1      TCTGGCATGATTGAATGGAGATCTATCGAGAACGGTACGGAAAATGAGGGGGGGCCCGGA 732
consensus_6339#2      TCTGGCATGATTGAATGAAAAACTATCGAGATTCAAAAAA-------------------- 399
                      ***************** * * *********                             

consensus_6339#0      ---
consensus_6339#1      CCC 735
consensus_6339#2      ---
                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)