These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6346#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1827 fasta sequence [TTCCCCCATCTCCGCGGGAAACAAACCGGAGCTCGCCTTGGCCTCGCCGCCGGCCTCCTCCTCCTCCTCCATCGCCGCACGCTCTCCCTCCGAACCCTAACCCTAGCTCGCTCGCTCCGGGGTCCCGGGCCATGCTCTCCACGGCGGCGCCATCCTCAACCTCCCTCGTCGCCTCGTTCCCGTCACGCGCGCGCCGGCGGGGGCTCCCGGGCCGACGCGGCGTGGTCGTCGCGGCCGCGGGGGCGGGGCCGGGGGCGGGGGCGGCGGAGAGGTTCGCGGCAAGCAGCAGCTCCATCACCGACTACCTGCG-GTACCGCCGCCCGGGGTCCGCCGGGG-GAG-GTGGGGGAACCGGGGTGTGCGGCGGGGAGCTGCAGACGGCGGTG-GTGCG-GTACGAGAAGCGGCTCCCGTGGTCGCTCATCCACCCCTTCCTCCATGTTGATTTGGTTTCTACTGTCCACATTGCTGACAAAGAATACTTCGATAGACTCCAGCAAGCACTTCAAGATTATGATTGTGTTCTTTATGAAATGGTTACAAGTCGGGAGAACTTAA-ACAA-TCGCAAGGACCCAACCTTTGCGAAGAAGCTGAAATCTTCACGTAGGGGATTCAGTATTCTTGGCTTCATACAGAAGCAAATGGCAAACATCCTTTCATTGGATTACCAGCTAGATTGCCTTGACTATGGCAGTGAAAAATGGCAACATGCTGACCTTGATTTTGAGACATTCAAGCAGCTTCAGAGTGAAAGAGGTGAAAGTCTTTTCACGTTTGCGGTAGACATGACACTGAAATCAACTAAAGCCTTGGTACAACCAACATTGCCTGATGGTCTTGACTTCTGGAGGTCTAAGCTGCTTTGGGCCTCACGTGTTCTACCAATGCCTCTTGTTGGACTGTTCCTTATCAGTGGGCTTTGCTTACCAATCGACGATCAAGGTGGATATCCTGAGCTTGAAGCATTGTCCAGGCTAGATTTTGGAGCTGCACTGAAGATTTTTCTGGCTAAGCAATTGACCTCCGATTTCACATCTATGACCTCACCCATTGAGGAAAAGTCAGTTATCATTGGGGAAAGGAATAGAGTTGCTACTGAGAAGATACAGGAAGCAATAAACCATGGGTACAAGAGAATAGCTGTCCTTTATGGAGGTGGGCATATGCCGGACCTGGGAAGACGTCTTCGTGAAGAGCTCAATATGGTCCCAGCTGACGTCCAGTGGGTGACAGCATGGTCAATTAGAA-GCCGGGAGCTAGACAGGGAATCTCTTCCATTCCTGAAGACCATGGCTGAAGTCTCAGGGTGGCCTTTGAATAGATACGAGACACTTGCTCTGCTTATCTTTTCTTCAGTTCTCGCAGTGGATCTTTGGTTCTGGGAGCTTCTTGTGGGTACTGCCGTGAACTGGGCATCTTTGGCTGGCTCATGGATTGAACAATTTAATGGTCCATTTTGACATCTAATGGGCAGAAGCAAAAGAAAAAGGAAACAAACAAAGAAAGAAAAGAAATAAAACAAAACAAAACACTTAACAACAGAATTGGCAGTGGAAAATAGATCATGTCCTTGTTGTTTAAATTCCAGTTATTTCTGGAATACTGCAACACGTTTGTATATAACCATTTGTTGGATCAAACTGGAATGAGTTTAAATGAAAATTGTCAAGCTACATGATGCAAAAAAAACGCTGGATTTTGCATCTGGAATTTTGGTCAGCAGATATAGTTGGTATGAACTTATGGTATTTATTTATTATCATGTGGTACCCCCTGATAAGGAGCTGGGATATATTACAAGTAAGCCCTGATGTTACAAGCGCAATCTTCACA] [+] EMBL AK105106 [TTCCCCCATCTCCGCGGGAAACAAACCGGAGCTCGCCTTGGCCTCGCCGCCGGCCTCCTCCTCCTCCTCCATCGCCGCACGCTCTCCCTCCGAACCCTAACCCTAGCTCGCTCGCTCCGGGGTCCCGGGCCATGCTCTCCACGGCGGCGCCATCCTCAACCTCCCTCGTCGCCTCGTTCCCGTCACGCGCGCGCCGGCGGGGGCTCCCGGGCCGACGCGGCGTGGTCGTCGCGGCCGCGGGGGCGGGGCCGGGGGCGGGGGCGGCGGAGAGGTTCGCGGCAAGCAGCAGCTCCATCACCGACTACCTGCG GTACCGCCGCCCGGGGTCCGCCGGGG GAG GTGGGGGAACCGGGGTGTGCGGCGGGGAGCTGCAGACGGCGGTG GTGCG GTACGAGAAGCGGCTCCCGTGGTCGCTCATCCACCCCTTCCTCCATGTTGATTTGGTTTCTACTGTCCACATTGCTGACAAAGAATACTTCGATAGACTCCAGCAAGCACTTCAAGATTATGATTGTGTTCTTTATGAAATGGTTACAAGTCGGGAGAACTTAA ACAA TCGCAAGGACCCAACCTTTGCGAAGAAGCTGAAATCTTCACGTAGGGGATTCAGTATTCTTGGCTTCATACAGAAGCAAATGGCAAACATCCTTTCATTGGATTACCAGCTAGATTGCCTTGACTATGGCAGTGAAAAATGGCAACATGCTGACCTTGATTTTGAGACATTCAAGCAGCTTCAGAGTGAAAGAGGTGAAAGTCTTTTCACGTTTGCGGTAGACATGACACTGAAATCAACTAAAGCCTTGGTACAACCAACATTGCCTGATGGTCTTGACTTCTGGAGGTCTAAGCTGCTTTGGGCCTCACGTGTTCTACCAATGCCTCTTGTTGGACTGTTCCTTATCAGTGGGCTTTGCTTACCAATCGACGATCAAGGTGGATATCCTGAGCTTGAAGCATTGTCCAGGCTAGATTTTGGAGCTGCACTGAAGATTTTTCTGGCTAAGCAATTGACCTCCGATTTCACATCTATGACCTCACCCATTGAGGAAAAGTCAGTTATCATTGGGGAAAGGAATAGAGTTGCTACTGAGAAGATACAGGAAGCAATAAACCATGGGTACAAGAGAATAGCTGTCCTTTATGGAGGTGGGCATATGCCGGACCTGGGAAGACGTCTTCGTGAAGAGCTCAATATGGTCCCAGCTGACGTCCAGTGGGTGACAGCATGGTCAATTAGAA GCCGGGAGCTAGACAGGGAATCTCTTCCATTCCTGAAGACCATGGCTGAAGTCTCAGGGTGGCCTTTGAATAGATACGAGACACTTGCTCTGCTTATCTTTTCTTCAGTTCTCGCAGTGGATCTTTGGTTCTGGGAGCTTCTTGTGGGTACTGCCGTGAACTGGGCATCTTTGGCTGGCTCATGGATTGAACAATTTAATGGTCCATTTTGACATCTAATGGGCAGAAGCGAAAGAAAAA ] [+] EMBL BU667241 [ CGCGGC AGCAGCAGCTCCATCACCGACTACCTGCGTGTACCG CGCCCGGGGTCCGCCGGGGTGAGTGTGGGGGAACCGGGGTGTGCGGCGGGGAGCTGCAGACGGCGGTGTGTGCGTGTACGA AAGCGGCTCCCGTGGTCGCTCATCCACCCCTTCCTCCATGTTGATTTGGTTTCTACTGTCCACATTGCTGACAAAGAATACTTCGATAGACTCCAGCAAGCACTTCAAGATTATGATTGTGTTCTTTATGAAATGGTTACAAGTCGGGAGAACTTAACACAACTCGCAAGGACCCAACCTTTGCGAAGAAGCTGAAATCTTCACGTAGGGGATTCAGTATTCTTGGCTTCA ] [-] EMBL CF325371 [ CCGGACCTGGGAAGACGTCTTCGTGAAGAGCTCAATATGGTCCCAGCTGACGTCCAGTGGGTGACAGCATGGTCAATTAGAA GCCGGGAGCTAGACAGGGAATCTCTTCCATTCCTGAAGACCATGGCTGAAGTCTCAGGGTGGCCTTTGAATAGATACGAGACACTTGCTCTGCTTATCTTTTCTTCAGTTCTCGCAGTGGATCTTTGGTTCTGGGAGCTTCTTGTGGGTACTGCCGTGAACTGGGCATCTTTGGCTGGCTCATGGATTGAACAATTTAATGGTCCATTTTGACATCTAATGGGCAGAAGCAAAAGAAAAAGGAAACAAACAAAGAAAGAAAAGAAATAAAACAAAACAAAACACTTAACAACAGAATTGGCAGTGGAAAATAGATCATGTCCTTGTTGTTTAAATTCCAGTTATTTCTGGAATACTGCAACACGTTTGTATATAACCATTTGTTGGATCAAACTGGAATGAGTTTAAATGAAAATTGTCAAGCTACATGATGCAAAAAAAAC ] [-] EMBL CA762383 [ ggGAAGAGCTCAATATGTTCCCAGCTGACGTCCAGTGGGTGACAGCATGGTCAATTAAAAGGCCGGGAGCTAGACAGGGAATCTCTTCCACTCCTGAAGACCATGGCTGAAGTCTCAGGGTGGCCTTTGAATAGATACGAGACACCTGCTCTGCTTATCTTTTCTTCAGTTCTCGCAGTGGATCTTTGGTTCTGGGAGCTTCTTGTGGGTACTGCCGTGAACTGGGCATCTTTGGCTGGCTCATGGATTGAACAATTTAATGGTCCATTTTGACATCTAATGGGCAGAAGCAAAAGAAAAAGGAACCAACCAAAGAAAGAAAAGAAATAAACCAAACCAAAACACTTAACAACAGAATTGGCAGTGGAAAATAGATCATGTCCTTGTTGTTTAAATTCCAGTTATTTCTGGAATACTGCAACACGTTTGTATATAACCATTTGTTGGATCAAACTGGAATGAGTTTAAATGAAAATTGTCAGGCTACATGATGCAATATTTGTGCTGGATTTTGCATCTGGAATTTTGGTCAGCAGATATAGTTGGTATGAACTTATGGTATTTATTTATTATCATGTGGTACCCCCTGATAAGGAGCTGGGATATATTACAAGTAAGCCCTGATGTTACAAGCGCAATCTTCACA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||