These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6349#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1973 fasta sequence [GTGAGTTTTCCGGCGGTTCTATCTCTCCTCCAAGACAAATGGAATCCTCTCCCCTATGCACTCTCTATCCTCGCGGTGGAGTTCTCCAATACCTTGATCATCACCTATGCCCACCCTTGCCTTCTCTTTTCGCCCGGTCTGTCGGATCTGAGAATGATGGTGTTTGGGGATGTCCAATCCACTCAGTGGCGGTGGTTCTTGGGGCCGACAGATCTATGCATGAGAAGGCATAGGCTTGGCAGATCCATATTCTTCCTGCCGCCCCTTTCTTGCTCTGAGCTCAAAGCCTGCAGGAATGCAGGATGAGGATGCCACCGAGGCAACTTCTGTAGGGGATCATGGGCTCATGGCGGTGGCAGATCTGGTGGGTAGAGGACATTGTGGAATAGGAGAAATAGGATAGGGAAGCGGTGGCCGAGATGGAGAAGGGAGA-GGGGAGGCACAGTCGCGCAGATGGTTGATGACTGATNACGCATCAGTAGGCTGGTTGCTTGGCCATGGAAAGAAGGGGACAAATGTGATTGTTGCCACCACAGTTTCTATTGGAACAATACTACTAGTGGCTGTCTTTATTGCCGTTTTCATCTACAGGAGAAAGACAACGAAGACAATGATACCACCAGACAACACCGGCAATGAGGAGGACAATGACTATGTTGACCCACCGACCCTTAACTTAACAGTGTTGAGAGCTGCAACAAGGAACTTCTCGGCAGAAAATAAGCTGGGAGAAGGAGGTTTCGGAGAAGTTTTTAAGGGTATACTAGAAGACGGGGAAGAAGTAGCAGTGAAAAGGCTTTCGAAGACCTCCTCACAGGGGTTCCATGAATTGAAAAATGAACTCGTGCTAGCTGCCAAGCTCAAGCACAAAAATTTGGTGCGGTTACTAGGTGTTTGCTTGCAGGAAGAAAAACTACTTGTGTATGAATACATGCCTAATAGAAGCCTAGATACCATCCTTTTTGAGCCTGAGAAACGACAACAACTGGATTGGAGAAAAAGGTTTATGATCATTTGTGGAATTGCTCGAGGCCTTCTATATCTGCATGAAGAGTCTAGCCAGAAGATCATAGATAGGGATCTGAAGCCAAGCAATGTCCTATTAGATGAGGATATGATCCCCAAGATCTCAGATTTTGGCCTTGCCAGGGCTTTTGGTGGAGAGCAATCGAAGGATGTTACAAGACGCCCTGTTGGAACCCTTGGGTATATGTCGCCGGAGTATGCCTACTGCGGGCATGTCTCCACTAAGTCAGATATGTTCAGTTTTGGGGTCATTGTTCTTGAGATGGTGACCGGTAGAAGGAGCAACGGGATGTATGCTTCCACCAAGTCAGATACTTATGAATCTGCCGACTCCACGTCTCTACTGAGCTACGTATGGGAGAAATGGAGGACACGATCCCTAGCTGACGCAGTGGACGCGTCGTTGGGTGGCCGATACCCTGAAAACGAGGTCTTCAGCTGCGTGCAGATTGGGCTACTGTGTGTCCAAGAGAATCCAGCCGACAGGCCGGACATTTCAGCTGTGGTGCTAATGTTGAGCAGCAATTCCACGTCGCTGCAGACTCCTTCTAAGCCGGCGTTCTTCTTCGGCTCTGGCAGCATCGCAAGCTTGGATGCTGCTGGTGGACATGCATTTTTCGGTGGCCGGGGTTCAGAAGTTGCGGCCATCAGCAGTAACAAGATGTCCAGTAACCCCGTTTCAGAGAATGAGGTCACGATTTCAGAGCTTCAACCGAGGTAGAAGAACAAATGCGTC-TGCATCAATTGTCAGTATTCAGGACACTTGATGTCCCCCGAATATCGGTGGTAATATGGC-AATAATGTCCAACAGATAAGTTAGTGTTCAGCGTAT-AAATTATTACACTAAAGCCTCTCCAAATCTCTCTAAGAATGCATTCCCGGTATGAAACTAATGGAAAAGCTATAATGATATCGATTAGATCGCACATTTTGATATTGGAACTACT] [+] EMBL C97478 [GTGAGTTTTCCGGCGGTTCTATCTCTCCTCCAAGACAAATGGAATCCTCTCCCCTATGCACTCTCTATCCTCGCGGTGGAGTTCTCCAATACCTTGATCATCACCTATGCCCACCCTTGCCTTCTCTTTTCGCCCGGTCTGTCGGATCTGAGAATGATGGTGTTTGGGGATGTCCAATCCACTCAGTGGCGGTGGTTCTTGGGGCCGACAGATCTATGCATGAGAAGGCATAGGCTTGGCAGATCCATATTCTTCCTGCCGCCCCTTTCTTGCTCTGAGCTCAAAGCCTGCAGGAATGCAGGATGAGGATGCCACCGAGGCAACTTCTGTAGGGGATCATGGGCTCATGGCGGTGGCAGATCTGGTGGGTAGAGGACATTGTGGAATAGGAGAAATAGGATAGGGAAGCGGTGGCCGAGATGGAGAAGGGAGA GGGGAGGCACAGTCGCGCAGATGGTTGATGACTGATNACGCATCAGTAGGCTGGTTGCTTGGCCATGGAAAGAAG ] [+] EMBL AK073556 [ TCCTCGCGGTGGAGTTCTCCAATACCTTGATCATCACCTATGCCCACCCTTGCCTTCTCTTTTCGCCCGGTCTGTCGGATCTGAGAATGATGGTGTTTGGGGATGTCCAATCCACTCAGTGGCGGTGGTTCTTGGGGCCGACAGATCTATGCATGAGAAGGCATAGGCTTGGCAGATCCATATTCTTCCTGCCGCCCCTTTCTTGCTCTGAGCTCAAAGCCTGCAGGAATGCAGGATGAGGATGCCACCGAGGCAACTTCTGTAGGGGATCATGGGCTCATGGCGGTGGCAGATCTGGTGGGTAGAGGACATTGTGGAATAGGAGAAATAGGATAGGGAAGCGGTGGCCGAGATGGAGAAGGGAGAGGGGGAGGCACAGTCGCGCAGATGGTTGATGACTGATGACGCATCAGTAGGCTGGTTGCTTGGCCATGGAAAGAAGGGGACAAATGTGATTGTTGCCACCACAGTTTCTATTGGAACAATACTACTAGTGGCTGTCTTTATTGCCGTTTTCATCTACAGGAGAAAGACAACGAAGACAATGATACCACCAGACAACACCGGCAATGAGGAGGACAATGACTATGTTGACCCACCGACCCTTAACTTAACAGTGTTGAGAGCTGCAACAAGGAACTTCTCGGCAGAAAATAAGCTGGGAGAAGGAGGTTTCGGAGAAGTTTTTAAGGGTATACTAGAAGACGGGGAAGAAGTAGCAGTGAAAAGGCTTTCGAAGACCTCCTCACAGGGGTTCCATGAATTGAAAAATGAACTCGTGCTAGCTGCCAAGCTCAAGCACAAAAATTTGGTGCGGTTACTAGGTGTTTGCTTGCAGGAAGAAAAACTACTTGTGTATGAATACATGCCTAATAGAAGCCTAGATACCATCCTTTTTGAGCCTGAGAAACGACAACAACTGGATTGGAGAAAAAGGTTTATGATCATTTGTGGAATTGCTCGAGGCCTTCTATATCTGCATGAAGAGTCTAGCCAGAAGATCATAGATAGGGATCTGAAGCCAAGCAATGTCCTATTAGATGAGGATATGATCCCCAAGATCTCAGATTTTGGCCTTGCCAGGGCTTTTGGTGGAGAGCAATCGAAGGATGTTACAAGACGCCCTGTTGGAACCCTTGGGTATATGTCGCCGGAGTATGCCTACTGCGGGCATGTCTCCACTAAGTCAGATATGTTCAGTTTTGGGGTCATTGTTCTTGAGATGGTGACCGGTAGAAGGAGCAACGGGATGTATGCTTCCACCAAGTCAGATACTTATGAATCTGCCGACTCCACGTCTCTACTGAGCTACGTATGGGAGAAATGGAGGACACGATCCCTAGCTGACGCAGTGGACGCGTCGTTGGGTGGCCGATACCCTGAAAACGAGGTCTTCAGCTGCGTGCAGATTGGGCTACTGTGTGTCCAAGAGAATCCAGCCGACAGGCCGGACATTTCAGCTGTGGTGCTAATGTTGAGCAGCAATTCCACGTCGCTGCAGACTCCTTCTAAGCCGGCGTTCTTCTTCGGCTCTGGCAGCATCGCAAGCTTGGATGCTGCTGGTGGACATGCATTTTTCGGTGGCCGGGGTTCAGAAGTTGCGGCCATCAGCAGTAACAAGATGTCCAGTAACCCCGTTTCAGAGAATGAGGTCACGATTTCAGAGCTTCAACCGAGGTAGAAGAACAAATGCGTC TGCATCAATTGTCAGTATTCAGGACACTTGATGTCCCCCGAATATCGGTGGTAATATGGC AATAATGTCCAACAGATAAGTTAGTGTTCAGCGTAT AAATTATTACACTAAAGCCTCTCCAAATCTCTCTAAGAATGCATTCCCGGTATGAAACTAATGGAAAAGCTATAATGATATCGATTAGATCGCACATTTTGATATTGGAACTACT] [+] EMBL CA766923 [ CCAAGCAATGTCCTATTAGATGAGGATATGATCCCCAAGATCTCAGATTTTGGCCTTGCCAGGGCTTTTGGTGGAGAGCAATCGAAGGATGTTACAAGACGCCCTGTTGGAACCCTTGGGTATATGTCGCCGGAGTATGCCTACTGCGGGCATGTCTCCACTAAGTCAGATATGTTCAGTTTTGGGGTCATTGTTCTTGAGATGGTGACCGGTAGAAGGAGCAACGGGATGTATGCTTCCACCAAGTCGGATACTTATGAATCTGCCGACTCCACGTCTCTACTGAGCTACGTATGGGAGAAATGGAGGACACGATCCCTAGCTGACGCAGTGGACGCGTCGTTGGGTGGCCGATACCCTGAAAACGAGGTCTTCAGCTGCGTGCAGATTGGGCTACTGTGTGTCCAAGAGAATCCAGCCGACAGGCCGGACATTTCAGCTGTGGTGCTAATGCTGAGCAGCAATTCCACGTCGCTGCAGACTCCTTCTAAGCCGGCGTTCTTCTTCGGCTCTGGCAGCATCGCAAACTTGGATGCTGCTGGTGGACATGCATTTTTCGGTGGCCGGGGTTCAGAAGTTGCGGNCATCAGCAGTAACAAGATGTCCAGTAACCCC GAATGANGTCACGATTTCAGAGCTTCAACCGAGGTAGAAGAACAAATGCGTCTTGCATCAATTGTCAGTATTCAGGACACTTGATGTCCCCCGAATATCGGNGGTAATATGGC AATAATGTCCAACAGATAAGTTAGNGGTCAGCGGATNAAATTATTACACTAAAGCCT ] [+] EMBL C97479 [ CGAGGTCTTNAGCTGCGTGCAGATTGGGCTACTGTGTGTCCAAGAGAATCCAGCCGACAGGCCGGACATTTCAGCTGTGGTGCTAATGTTGAGCAGCAATTCCACGTCGCTGCAGACTCCTTCTAAGCCGGCGTTCTTCTTCGGCTCTGGCAGCATCGCAAGCTTGGATGCTGCTGGTGGACATGCATTTTTCGGTGGCCGGGGTTCAGAAGTTGCGGCCATCAGCAGTAACAAGATGTCCAGTAACCCCGTTTCAGAGAATGAGGTCACGATTTCAGAGCTTCAACCGAGGTAGAAGAACAAATGCGTC TGCATCAATTGTCAGTATTCAGGACACTTGATGTCCCCCGAATATCGGTGGTAATATGGCNATTAATGTCCAACAGATAAGTTAGTGTTCAGCGTAT AAATTATTACACTAAAGCCTCTCCAAATCTCTCTAAGAATGCATTCCNGGTATGAAACTAATGGAAAAGCTATAATGATATCGATTNGATCGCACATTTTGATAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||