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Oryza sativa
cluster # 6371 cluster # 6371       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6371#0 length = 2036 sequences # 2  
consensus_6371#1 length = 1899 sequences # 2  

consensusID : consensus_6371#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2036
fasta sequence
                              [TTTCTTAGAGCTTGTGTGTAGCTAGCTCTTGCATGAGAGCCAACACTCTCCACTTTTATTTATCTCTCTCTTCCACATAAGCATTTAGCTTGCTTATAGCTCACCATTATCCTTGCTCTTATGTACATATTATACCCATATTATGGGGATTAACCGAAGAACAAGGCCTTAATGGGAAATTATCTTGGAGGCCTCCCCAACTGTTCAACAGCAATGAAGCACCATGTATAATTGACCAGACCACTACGAACTACGAAATTGAAAAGCTTGAATTTCTAACAAATGGGTTTGGACAATTTTCTATGGATCCTAATTGATGGAAGACAAATGCAAAGGTCAAGAGCCATGCTCAGGAAGAAATTCAAGTTTCAACCTGATTGGAATGCGCCATGGCAACATTCCCCTCCTCCATGTCCTTGAGAAATTCAGCGAATGCAGTGCACGATGATCCCCCTTCCTTCCATGCTGCCGCTGCGCTCTCCTTCATCGCCATGACCCGCTCCAGGACTCCCTGCTGCGCATCCGATTCCATGATCCGCCTCAAGATGGCATCGACGATGTCGGCCTGGACAAGTGCCCCGGGTTTATACCCTCTGACCTCGATGCCAATCTTCATCTCCTCCACGATGAACACCTTGTTCATCCACTGCTCCGCGTCGAGCGGCCAGCACACCATTGGAACGCCGGCTGCGACAGCCTCCAGCGTCGAGTTCCATCCACAGTGCGTCACGAATGCGCCCGTGGATGCGTGCTGCAGCACCGCCACCTGCGGCACCCAGGACGCGGTCACCACGACGCCTCTGTCGGCTGTCCGCGCCAAGAATCCGTCAGGAAGAAGAGACATCGCGGCGTCCGGCTTCGTGCCCGCGGGCGCGCGCAGCGCCCACAAGAATCTCTGCTCGGACCTCTCGAGGCCCGTGGCCATCTCGCTGACCTGCTCCGGCGAGAGCGCGCCGCGGCTCCCGAAGCAGAGGAACACGACGCTGCGCTCCGGCTGCGCGTCCAGCCAAGCGAGGCACGGGTGCCTCTCCTCCTCCGCGCCGCCGTTGGTGATCAATGGCCCGACGCAGTAGACCGGCGGCGTGGCGCGGTTGGAGAGGCAGCGGCCGTCCCTCAGCGCCGCCACCCCGGGACCCTCCAGCGCGTCGAAGGTGTTCACCAGAATGCCGCGCGCGTCCGCCATCCGGTCGAACGCGTCCAGCATGGCCGCGCTTATGTCCGTCCCACGGTCGAGCACCTCCTCGGGCAAGTGCGACGCCGGCAGCGGGCGCACGCCGGGAAACGACACGGGCGCGTCGCCGAGCTCCCTCAAGCTTCCGCTGCTCCCGGCGCAAAACCGTGGCAAACGGAGGAAAACGGCGAGGTTGGTGGCGCCGGTGCAGAAGAGGAGGTACCCGGGGACGCCGAGCTCGGCGGCGACGTCGAGGGCGTAGACGGAGAACATGTCGGCCACGAGCGCCCGAGCGGCATGGGGGCCACGCAGCAGGTCCCCGAGGGCGGGCGCGTGGGCGCGGAGGACGGCGAGCATACGGAGGAGCGGGTGAGCGGCGGCATCGGCGCCGGAGGAGGCAGGAGGATGAGGAGGAGGAGGGAGTGGATGGACGGAGAGGGAGGGGAGGCGGGATGCGTACTTGCGGAGCGCGGCGGAGAAGGCGGGGGCGGTGGTGGCCGGGTCAGGGACGGCGACCGTGACGGCGAGGCCGTGGCGGATGCAAACCGCGGCGAGCTCCAGCATGGGGGCGAGATGGCCCACGCCGAGGCTGGGGAACAAGACCACTCTCCTTGCAGCCG-CCATTGGAGGATCGCTGCTCACCTCTGCTCTTGCCTTTCTTGAATTCTTGGTGGGCAATCCGCGACGGATAGAGACGATGCACTACTAATCAATCTGAGGGACTTTCTGCCCTTTCTTTTTCATTTTTTTCCCCTTCTTTCGTGTGGACTAGCGTGGCGTGGTTGCTTTTCCGTTTTTGTTTAATCATCACTGTCAAATATATACACATATCACTGTATCTGTTCAACTAATGACCTAACTTTCT]

[+] EMBL AK106646             [TTTCTTAGAGCTTGTGTGTAGCTAGCTCTTGCATGAGAGCCAACACTCTCCACTTTTATTTATCTCTCTCTTCCACATAAGCATTTAGCTTGCTTATAGCTCACCATTATCCTTGCTCTTATGTACATATTATACCCATATTATGGGGATTAACCGAAGAACAAGGCCTTAATGGGAAATTATCTTGGAGGCCTCCCCAACTGTTCAACAGCAATGAAGCACCATGTATAATTGACCAGACCACTACGAACTACGAAATTGAAAAGCTTGAATTTCTAACAAATGGGTTTGGACAATTTTCTATGGATCCTAATTGATGGAAGACAAATGCAAAGGTCAAGAGCCATGCTCAGGAAGAAATTCAAGTTTCAACCTGATTGGAATGCGCCATGGCAACATTCCCCTCCTCCATGTCCTTGAGAAATTCAGCGAATGCAGTGCACGATGATCCCCCTTCCTTCCATGCTGCCGCTGCGCTCTCCTTCATCGCCATGACCCGCTCCAGGACTCCCTGCTGCGCATCCGATTCCATGATCCGCCTCAAGATGGCATCGACGATGTCGGCCTGGACAAGTGCCCCGGGTTTATACCCTCTGACCTCGATGCCAATCTTCATCTCCTCCACGATGAACACCTTGTTCATCCACTGCTCCGCGTCGAGCGGCCAGCACACCATTGGAACGCCGGCTGCGACAGCCTCCAGCGTCGAGTTCCATCCACAGTGCGTCACGAATGCGCCCGTGGATGCGTGCTGCAGCACCGCCACCTGCGGCACCCAGGACGCGGTCACCACGACGCCTCTGTCGGCTGTCCGCGCCAAGAATCCGTCAGGAAGAAGAGACATCGCGGCGTCCGGCTTCGTGCCCGCGGGCGCGCGCAGCGCCCACAAGAATCTCTGCTCGGACCTCTCGAGGCCCGTGGCCATCTCGCTGACCTGCTCCGGCGAGAGCGCGCCGCGGCTCCCGAAGCAGAGGAACACGACGCTGCGCTCCGGCTGCGCGTCCAGCCAAGCGAGGCACGGGTGCCTCTCCTCCTCCGCGCCGCCGTTGGTGATCAATGGCCCGACGCAGTAGACCGGCGGCGTGGCGCGGTTGGAGAGGCAGCGGCCGTCCCTCAGCGCCGCCACCCCGGGACCCTCCAGCGCGTCGAAGGTGTTCACCAGAATGCCGCGCGCGTCCGCCATCCGGTCGAACGCGTCCAGCATGGCCGCGCTTATGTCCGTCCCACGGTCGAGCACCTCCTCGGGCAAGTGCGACGCCGGCAGCGGGCGCACGCCGGGAAACGACACGGGCGCGTCGCCGAGCTCCCTCAAGCTTCCGCTGCTCCCGGCGCAAAACCGTGGCAAACGGAGGAAAACGGCGAGGTTGGTGGCGCCGGTGCAGAAGAGGAGGTACCCGGGGACGCCGAGCTCGGCGGCGACGTCGAGGGCGTAGACGGAGAACATGTCGGCCACGAGCGCCCGAGCGGCATGGGGGCCACGCAGCAGGTCCCCGAGGGCGGGCGCGTGGGCGCGGAGGACGGCGAGCATACGGAGGAGCGGGTGAGCGGCGGCATCGGCGCCGGAGGAGGCAGGAGGATGAGGAGGAGGAGGGAGTGGATGGACGGAGAGGGAGGGGAGGCGGGATGCGTACTTGCGGAGCGCGGCGGAGAAGGCGGGGGCGGTGGTGGCCGGGTCAGGGACGGCGACCGTGACGGCGAGGCCGTGGCGGATGCAAACCGCGGCGAGCTCCAGCATGGGGGCGAGATGGCCCACGCCGAGGCTGGGGAACAAGACCACTCTCCTTGCAGCCG CCATTGGAGGATCGCTGCTCACCTCTGCTCTTGCCTTTCTTGAATTCTTGGTGGGCAATCCGCGACGGATAGAGACGATGCACTACTAATCAATCTGAGGGACTTTCTGCCCTTTCTTTTTCATTTTTTTCCCCTTCTTTCGTGTGGACTAGCGTGGCGTGGTTGCTTTTCCGTTTTTGTTTAATCATCACTGTCAAATATATACACATATCACTGTATCTGTTCAACTAATGACCTAACTTTCT]
[-] EMBL CB675381             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCGTGTTTATGTCCGTCCCACGGTTGAGCACCTCCTCGGGCAAGTGCGACGCCGGCAGCGGGCGCACGCCGGTAATCGACACGGTCGCGTAGCCGAGCTCCCTCAAGCTTCCGCTGATCCAGGCGCAAAACCGTGGCAAACGGAGGAAAACGGCGAGGTTGGTGGCGCCGGTGCAGAAGAGGAGGTACCCGGGGACGCCGAGCTCGTCGGCGACGTCGAGGTCGTAGACGGAGAACATGTCGACCACGAGCGCCCGAGCGGCATGGGGGCCACGCAGCAGGTCCCCGAGGGCGGGCGCGTGGGCGCGGAGGACGGCGAGCATACGGAGGAGCGGGTGAGCGGCGGCATCGGCGCCGGAGGAGGCAGGAGGATGAGGAGGAGGAGCGAGTGGATGGACGGAGAGGGAGGGGAGGCGGGATGCGTACTTGCGGAGCGCGGCGGAGAAGGCGGGGGCGGTGGTGGCCGGGTCAGGGACGGCGACCGTGACGGCGAGGCCGTGGCGGATGCAAACCGCGGCGAGCTCCAGCATGGGGGCGAGATGGCCCACGCCGAGGCTGGGGAACAAGACCACTCTCCTTGCAGCCGCCCATTGGAGGATCGCTGCTCACCTCTGCTCTTGCCTTTCTTGAATTCTTG                                                                                                                                                                                                   ]


>consensus_6371#0 TTTCTTAGAGCTTGTGTGTAGCTAGCTCTTGCATGAGAGCCAACACTCTCCACTTTTATT TATCTCTCTCTTCCACATAAGCATTTAGCTTGCTTATAGCTCACCATTATCCTTGCTCTT ATGTACATATTATACCCATATTATGGGGATTAACCGAAGAACAAGGCCTTAATGGGAAAT TATCTTGGAGGCCTCCCCAACTGTTCAACAGCAATGAAGCACCATGTATAATTGACCAGA CCACTACGAACTACGAAATTGAAAAGCTTGAATTTCTAACAAATGGGTTTGGACAATTTT CTATGGATCCTAATTGATGGAAGACAAATGCAAAGGTCAAGAGCCATGCTCAGGAAGAAA TTCAAGTTTCAACCTGATTGGAATGCGCCATGGCAACATTCCCCTCCTCCATGTCCTTGA GAAATTCAGCGAATGCAGTGCACGATGATCCCCCTTCCTTCCATGCTGCCGCTGCGCTCT CCTTCATCGCCATGACCCGCTCCAGGACTCCCTGCTGCGCATCCGATTCCATGATCCGCC TCAAGATGGCATCGACGATGTCGGCCTGGACAAGTGCCCCGGGTTTATACCCTCTGACCT CGATGCCAATCTTCATCTCCTCCACGATGAACACCTTGTTCATCCACTGCTCCGCGTCGA GCGGCCAGCACACCATTGGAACGCCGGCTGCGACAGCCTCCAGCGTCGAGTTCCATCCAC AGTGCGTCACGAATGCGCCCGTGGATGCGTGCTGCAGCACCGCCACCTGCGGCACCCAGG ACGCGGTCACCACGACGCCTCTGTCGGCTGTCCGCGCCAAGAATCCGTCAGGAAGAAGAG ACATCGCGGCGTCCGGCTTCGTGCCCGCGGGCGCGCGCAGCGCCCACAAGAATCTCTGCT CGGACCTCTCGAGGCCCGTGGCCATCTCGCTGACCTGCTCCGGCGAGAGCGCGCCGCGGC TCCCGAAGCAGAGGAACACGACGCTGCGCTCCGGCTGCGCGTCCAGCCAAGCGAGGCACG GGTGCCTCTCCTCCTCCGCGCCGCCGTTGGTGATCAATGGCCCGACGCAGTAGACCGGCG GCGTGGCGCGGTTGGAGAGGCAGCGGCCGTCCCTCAGCGCCGCCACCCCGGGACCCTCCA GCGCGTCGAAGGTGTTCACCAGAATGCCGCGCGCGTCCGCCATCCGGTCGAACGCGTCCA GCATGGCCGCGCTTATGTCCGTCCCACGGTCGAGCACCTCCTCGGGCAAGTGCGACGCCG GCAGCGGGCGCACGCCGGGAAACGACACGGGCGCGTCGCCGAGCTCCCTCAAGCTTCCGC TGCTCCCGGCGCAAAACCGTGGCAAACGGAGGAAAACGGCGAGGTTGGTGGCGCCGGTGC AGAAGAGGAGGTACCCGGGGACGCCGAGCTCGGCGGCGACGTCGAGGGCGTAGACGGAGA ACATGTCGGCCACGAGCGCCCGAGCGGCATGGGGGCCACGCAGCAGGTCCCCGAGGGCGG GCGCGTGGGCGCGGAGGACGGCGAGCATACGGAGGAGCGGGTGAGCGGCGGCATCGGCGC CGGAGGAGGCAGGAGGATGAGGAGGAGGAGGGAGTGGATGGACGGAGAGGGAGGGGAGGC GGGATGCGTACTTGCGGAGCGCGGCGGAGAAGGCGGGGGCGGTGGTGGCCGGGTCAGGGA CGGCGACCGTGACGGCGAGGCCGTGGCGGATGCAAACCGCGGCGAGCTCCAGCATGGGGG CGAGATGGCCCACGCCGAGGCTGGGGAACAAGACCACTCTCCTTGCAGCCGCCATTGGAG GATCGCTGCTCACCTCTGCTCTTGCCTTTCTTGAATTCTTGGTGGGCAATCCGCGACGGA TAGAGACGATGCACTACTAATCAATCTGAGGGACTTTCTGCCCTTTCTTTTTCATTTTTT TCCCCTTCTTTCGTGTGGACTAGCGTGGCGTGGTTGCTTTTCCGTTTTTGTTTAATCATC ACTGTCAAATATATACACATATCACTGTATCTGTTCAACTAATGACCTAACTTTCT



consensusID : consensus_6371#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1899
fasta sequence
                              [CAACACTCTCCACTTTTATTTATCTCTCTCTTCCACATAAGCATTTAGCTTGCTTATAGCTCACCATTATCCTTGCTCTTATGTACATATTATACCCATATTATGGGGATTAACCGAAGAACAAGGCCTTAATGGGAAATTATCTTGGAGGCCTCCCCAACTGTTCAACAGCAATGAAGCACCATGTATAATTGACCAGACCACTACGAACTACGAAATTGAAAAGCTTGAATTTCTAACAAGTAAGAGACCTGTCATCACATATTTGTGGTCAGTGAATTTCATTTGAACTTAAGCTTATCATAAACAAGCATTTGACCAACTGTGGTGCTTGCAGATGGGTTTGGACAATTTTCTATGGATCCTAATTGATGGAAGACAAATGCAAAGGTCAAGAGCCATGCTCAGGAAGAAATTCAAGTTTCAACCTGATTGGAATGCGCCATGGCAACATTCCCCTCCTCCATGTCCTTGAGAAATTCAGCGAATGCAGTGCACGATGATCCCCCTTCCTTCCATGCTGCCGCTGCGCTCTCCTTCATCGCCATGACCCGCTCCAGGACTCCCTGCTGCGCATCCGATTCCATGATCCGCCTCAAGATGGCATCGACGATGTCGGCCTGGACAAGTGCCCCGGGTTTATACCCTCTGACCTCGATGCCAATCTTCATCTCCTCCACGATGAACACCTTGTTCATCCACTGCTCCGCGTCGAGCGGCCAGCACACCATTGGAACGCCGGCTGCGACAGCCTCCAGCGTCGAGTTCCATCCACAGTGCGTCACGAATGCGCCCGTGGATGCGTGCTGCAGCACCGCCACCTGCGGCACCCAGGACGCGGTCACCACGACGCCTCTGTCGGCTGTCCGCGCCAAGAATCCGTCAGGAAGAAGAGACATCGCGGCGTCCGGCTTCGTGCCCGCGGGCGCGCGCAGCGCCCACAAGAATCTCTGCTCGGACCTCTCGAGGCCCGTGGCCATCTCGCTGACCTGCTCCGGCGAGAGCGCGCCGCGGCTCCCGAAGCAGAGGAACACGACGCTGCGCTCCGGCTGCGCGTCCAGCCAAGCGAGGCACGGGTGCCTCTCCTCCTCCGCGCCGCCGTCGGTGATCAATGGCCCGACGCAGTAGACCGGCGGCGTGGCGCGGTTGGAGAGGCAGCGGCCGTCCCTCAGCGCCGCCACCCCGGGACCCTCCAGCGCGTCGAAGGTGTTCACCAGAATGCCGCGCGCGTCCGCCATCCGGTCGAACGCGTCCAGCATGGCCGCGCTTATGTCCGTCCCACGGTCGAGCACCTCCTCGGGCAAGTGCGACGCCGGCAGCGGGCGCACGCCGGGGAACGACACGGGCGCGTCGCCGAGCTCCCTCAAGCTTCCGCTGCTCCCGGCGCAAAACCGTGGCAAACGGAGGAAAACGGCGAGGTTGGTGGCGCCGGTGCAGAAGAGGAGGTACCCGGGGACGCCGAGCTCGGCGGCGACGTCGAGGGCGTAGACGGAGAACATGTCGGCCACGAGCGCCCGAGCGGCATGGGGGCCACGCAGCAGGTCCCCGAGGGCGGGCGCGTGGGCGCGGAGGACGGCGAGCATACGGAGGAGCGGGTGAGCGGCGGCATCGGCGCCGGAGGAGGCAGGAGGATGAGGAGGAGGAGGGAGTGGATGGACGGAGAGGGAGGGGAGGCGGGATGCGTACTTGCGGAGCGCGGCGGAGAAGGCGGGGGCGGTGGTGGCCGGGTCAGGGACGGCGACCGTGACGGCGAGGCCGTGGCGGATGCAAACCGCGGCGAGCTCCAGCATGGGGGCGAGATGGCCCACGCCGAGGCTGGGGAACAAGACCACTCTCCTTGCAGCCGCCATTGGAGGATCGCTGCTCACCTCTGCTCTTGCCTTTCTTGAATTCTTGGTG]

[-] EMBL AK102481             [CAACACTCTCCACTTTTATTTATCTCTCTCTTCCACATAAGCATTTAGCTTGCTTATAGCTCACCATTATCCTTGCTCTTATGTACATATTATACCCATATTATGGGGATTAACCGAAGAACAAGGCCTTAATGGGAAATTATCTTGGAGGCCTCCCCAACTGTTCAACAGCAATGAAGCACCATGTATAATTGACCAGACCACTACGAACTACGAAATTGAAAAGCTTGAATTTCTAACAAGTAAGAGACCTGTCATCACATATTTGTGGTCAGTGAATTTCATTTGAACTTAAGCTTATCATAAACAAGCATTTGACCAACTGTGGTGCTTGCAGATGGGTTTGGACAATTTTCTATGGATCCTAATTGATGGAAGACAAATGCAAAGGTCAAGAGCCATGCTCAGGAAGAAATTCAAGTTTCAACCTGATTGGAATGCGCCATGGCAACATTCCCCTCCTCCATGTCCTTGAGAAATTCAGCGAATGCAGTGCACGATGATCCCCCTTCCTTCCATGCTGCCGCTGCGCTCTCCTTCATCGCCATGACCCGCTCCAGGACTCCCTGCTGCGCATCCGATTCCATGATCCGCCTCAAGATGGCATCGACGATGTCGGCCTGGACAAGTGCCCCGGGTTTATACCCTCTGACCTCGATGCCAATCTTCATCTCCTCCACGATGAACACCTTGTTCATCCACTGCTCCGCGTCGAGCGGCCAGCACACCATTGGAACGCCGGCTGCGACAGCCTCCAGCGTCGAGTTCCATCCACAGTGCGTCACGAATGCGCCCGTGGATGCGTGCTGCAGCACCGCCACCTGCGGCACCCAGGACGCGGTCACCACGACGCCTCTGTCGGCTGTCCGCGCCAAGAATCCGTCAGGAAGAAGAGACATCGCGGCGTCCGGCTTCGTGCCCGCGGGCGCGCGCAGCGCCCACAAGAATCTCTGCTCGGACCTCTCGAGGCCCGTGGCCATCTCGCTGACCTGCTCCGGCGAGAGCGCGCCGCGGCTCCCGAAGCAGAGGAACACGACGCTGCGCTCCGGCTGCGCGTCCAGCCAAGCGAGGCACGGGTGCCTCTCCTCCTCCGCGCCGCCGTCGGTGATCAATGGCCCGACGCAGTAGACCGGCGGCGTGGCGCGGTTGGAGAGGCAGCGGCCGTCCCTCAGCGCCGCCACCCCGGGACCCTCCAGCGCGTCGAAGGTGTTCACCAGAATGCCGCGCGCGTCCGCCATCCGGTCGAACGCGTCCAGCATGGCCGCGCTTATGTCCGTCCCACGGTCGAGCACCTCCTCGGGCAAGTGCGACGCCGGCAGCGGGCGCACGCCGGGGAACGACACGGGCGCGTCGCCGAGCTCCCTCAAGCTTCCGCTGCTCCCGGCGCAAAACCGTGGCAAACGGAGGAAAACGGCGAGGTTGGTGGCGCCGGTGCAGAAGAGGAGGTACCCGGGGACGCCGAGCTCGGCGGCGACGTCGAGGGCGTAGACGGAGAACATGTCGGCCACGAGCGCCCGAGCGGCATGGGGGCCACGCAGCAGGTCCCCGAGGGCGGGCGCGTGGGCGCGGAGGACGGCGAGCATACGGAGGAGCGGGTGAGCGGCGGCATCGGCGCCGGAGGAGGCAGGAGGATGAGGAGGAGGAGGGAGTGGATGGACGGAGAGGGAGGGGAGGCGGGATGCGTACTTGCGGAGCGCGGCGGAGAAGGCGGGGGCGGTGGTGGCCGGGTCAGGGACGGCGACCGTGACGGCGAGGCCGTGGCGGATGCAAACCGCGGCGAGCTCCAGCATGGGGGCGAGATGGCCCACGCCGAGGCTGGGGAACAAGACCACTCTCCTTGCAGCCGCCATTGGAGGATCGCTGCTCACCTCTGCTCTTGCCTTTCTTGAATTCTTGGTG]
[+] EMBL CB675382             [                                                                                                                                                                                                                                                                                    GAATTTCATTTGAACTTAAGCTTATCATAAACAAGCATTTGACCAACTGTGGTGCTTGCAGATGGGTTTGGACAATTTTCTATGGATCCTAATTGATGGAAGACAAATGCAAAGGTCAAGAGCCATGCTCAGGAAGAAATTCAAGTTTCAACCTGATTGGAATGCGCCATGGCAACATTCCCCTCCTCCATGTCCTTGAGAAATTCAGCGAATGCAGTGCACGATGATCCCCCTTCCTTCCATGCTGCCGCTGCGCTCTCCTTCATCGCCATGACCCGCTCCAGGACTCCCTGCTGCGCATCCGATTCCATGATCCGCCTCAAGATGGCATCCACGATGTCGGCCTGGACAAGTGCCCCGGGTTTATACCCTCTGACCTCGATGCCAATCTTCATCTCCTCCACGATGAACACCTTGTTCATCCACTGCTCCCCGTCGAGCGGCCAGCACACCATTGGAACGCCGGCTGCGACAGCCTCCACCGTCGAGTTCCATCCACAGTGCGTCACGAATGCGCCCGTGGATGCGTGCTGCAGCACCGCCACCTGCGGCACCCAGGACGCGGTCACCACGACGCCTCTGTCGGCTGTCCGCGCCAAGAATCCGTCAGGAAGAAGAGACATCGCGGCGTCCGGCTTCGTGCCCGCGGGCGCGCGCAGCGCCCACAAGAATCTCTGCTCGGACCTCTCGAGGCCCGTGGCCATCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]


>consensus_6371#1 CAACACTCTCCACTTTTATTTATCTCTCTCTTCCACATAAGCATTTAGCTTGCTTATAGC TCACCATTATCCTTGCTCTTATGTACATATTATACCCATATTATGGGGATTAACCGAAGA ACAAGGCCTTAATGGGAAATTATCTTGGAGGCCTCCCCAACTGTTCAACAGCAATGAAGC ACCATGTATAATTGACCAGACCACTACGAACTACGAAATTGAAAAGCTTGAATTTCTAAC AAGTAAGAGACCTGTCATCACATATTTGTGGTCAGTGAATTTCATTTGAACTTAAGCTTA TCATAAACAAGCATTTGACCAACTGTGGTGCTTGCAGATGGGTTTGGACAATTTTCTATG GATCCTAATTGATGGAAGACAAATGCAAAGGTCAAGAGCCATGCTCAGGAAGAAATTCAA GTTTCAACCTGATTGGAATGCGCCATGGCAACATTCCCCTCCTCCATGTCCTTGAGAAAT TCAGCGAATGCAGTGCACGATGATCCCCCTTCCTTCCATGCTGCCGCTGCGCTCTCCTTC ATCGCCATGACCCGCTCCAGGACTCCCTGCTGCGCATCCGATTCCATGATCCGCCTCAAG ATGGCATCGACGATGTCGGCCTGGACAAGTGCCCCGGGTTTATACCCTCTGACCTCGATG CCAATCTTCATCTCCTCCACGATGAACACCTTGTTCATCCACTGCTCCGCGTCGAGCGGC CAGCACACCATTGGAACGCCGGCTGCGACAGCCTCCAGCGTCGAGTTCCATCCACAGTGC GTCACGAATGCGCCCGTGGATGCGTGCTGCAGCACCGCCACCTGCGGCACCCAGGACGCG GTCACCACGACGCCTCTGTCGGCTGTCCGCGCCAAGAATCCGTCAGGAAGAAGAGACATC GCGGCGTCCGGCTTCGTGCCCGCGGGCGCGCGCAGCGCCCACAAGAATCTCTGCTCGGAC CTCTCGAGGCCCGTGGCCATCTCGCTGACCTGCTCCGGCGAGAGCGCGCCGCGGCTCCCG AAGCAGAGGAACACGACGCTGCGCTCCGGCTGCGCGTCCAGCCAAGCGAGGCACGGGTGC CTCTCCTCCTCCGCGCCGCCGTCGGTGATCAATGGCCCGACGCAGTAGACCGGCGGCGTG GCGCGGTTGGAGAGGCAGCGGCCGTCCCTCAGCGCCGCCACCCCGGGACCCTCCAGCGCG TCGAAGGTGTTCACCAGAATGCCGCGCGCGTCCGCCATCCGGTCGAACGCGTCCAGCATG GCCGCGCTTATGTCCGTCCCACGGTCGAGCACCTCCTCGGGCAAGTGCGACGCCGGCAGC GGGCGCACGCCGGGGAACGACACGGGCGCGTCGCCGAGCTCCCTCAAGCTTCCGCTGCTC CCGGCGCAAAACCGTGGCAAACGGAGGAAAACGGCGAGGTTGGTGGCGCCGGTGCAGAAG AGGAGGTACCCGGGGACGCCGAGCTCGGCGGCGACGTCGAGGGCGTAGACGGAGAACATG TCGGCCACGAGCGCCCGAGCGGCATGGGGGCCACGCAGCAGGTCCCCGAGGGCGGGCGCG TGGGCGCGGAGGACGGCGAGCATACGGAGGAGCGGGTGAGCGGCGGCATCGGCGCCGGAG GAGGCAGGAGGATGAGGAGGAGGAGGGAGTGGATGGACGGAGAGGGAGGGGAGGCGGGAT GCGTACTTGCGGAGCGCGGCGGAGAAGGCGGGGGCGGTGGTGGCCGGGTCAGGGACGGCG ACCGTGACGGCGAGGCCGTGGCGGATGCAAACCGCGGCGAGCTCCAGCATGGGGGCGAGA TGGCCCACGCCGAGGCTGGGGAACAAGACCACTCTCCTTGCAGCCGCCATTGGAGGATCG CTGCTCACCTCTGCTCTTGCCTTTCTTGAATTCTTGGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6371#0      TTTCTTAGAGCTTGTGTGTAGCTAGCTCTTGCATGAGAGCCAACACTCTCCACTTTTATT 60
consensus_6371#1      ----------------------------------------CAACACTCTCCACTTTTATT 20
                                                              ********************

consensus_6371#0      TATCTCTCTCTTCCACATAAGCATTTAGCTTGCTTATAGCTCACCATTATCCTTGCTCTT 120
consensus_6371#1      TATCTCTCTCTTCCACATAAGCATTTAGCTTGCTTATAGCTCACCATTATCCTTGCTCTT 80
                      ************************************************************

consensus_6371#0      ATGTACATATTATACCCATATTATGGGGATTAACCGAAGAACAAGGCCTTAATGGGAAAT 180
consensus_6371#1      ATGTACATATTATACCCATATTATGGGGATTAACCGAAGAACAAGGCCTTAATGGGAAAT 140
                      ************************************************************

consensus_6371#0      TATCTTGGAGGCCTCCCCAACTGTTCAACAGCAATGAAGCACCATGTATAATTGACCAGA 240
consensus_6371#1      TATCTTGGAGGCCTCCCCAACTGTTCAACAGCAATGAAGCACCATGTATAATTGACCAGA 200
                      ************************************************************

consensus_6371#0      CCACTACGAACTACGAAATTGAAAAGCTTGAATTTCTAACAA------------------ 282
consensus_6371#1      CCACTACGAACTACGAAATTGAAAAGCTTGAATTTCTAACAAGTAAGAGACCTGTCATCA 260
                      ******************************************                  

consensus_6371#0      ------------------------------------------------------------
consensus_6371#1      CATATTTGTGGTCAGTGAATTTCATTTGAACTTAAGCTTATCATAAACAAGCATTTGACC 320
                                                                                  

consensus_6371#0      -----------------ATGGGTTTGGACAATTTTCTATGGATCCTAATTGATGGAAGAC 325
consensus_6371#1      AACTGTGGTGCTTGCAGATGGGTTTGGACAATTTTCTATGGATCCTAATTGATGGAAGAC 380
                                       *******************************************

consensus_6371#0      AAATGCAAAGGTCAAGAGCCATGCTCAGGAAGAAATTCAAGTTTCAACCTGATTGGAATG 385
consensus_6371#1      AAATGCAAAGGTCAAGAGCCATGCTCAGGAAGAAATTCAAGTTTCAACCTGATTGGAATG 440
                      ************************************************************

consensus_6371#0      CGCCATGGCAACATTCCCCTCCTCCATGTCCTTGAGAAATTCAGCGAATGCAGTGCACGA 445
consensus_6371#1      CGCCATGGCAACATTCCCCTCCTCCATGTCCTTGAGAAATTCAGCGAATGCAGTGCACGA 500
                      ************************************************************

consensus_6371#0      TGATCCCCCTTCCTTCCATGCTGCCGCTGCGCTCTCCTTCATCGCCATGACCCGCTCCAG 505
consensus_6371#1      TGATCCCCCTTCCTTCCATGCTGCCGCTGCGCTCTCCTTCATCGCCATGACCCGCTCCAG 560
                      ************************************************************

consensus_6371#0      GACTCCCTGCTGCGCATCCGATTCCATGATCCGCCTCAAGATGGCATCGACGATGTCGGC 565
consensus_6371#1      GACTCCCTGCTGCGCATCCGATTCCATGATCCGCCTCAAGATGGCATCGACGATGTCGGC 620
                      ************************************************************

consensus_6371#0      CTGGACAAGTGCCCCGGGTTTATACCCTCTGACCTCGATGCCAATCTTCATCTCCTCCAC 625
consensus_6371#1      CTGGACAAGTGCCCCGGGTTTATACCCTCTGACCTCGATGCCAATCTTCATCTCCTCCAC 680
                      ************************************************************

consensus_6371#0      GATGAACACCTTGTTCATCCACTGCTCCGCGTCGAGCGGCCAGCACACCATTGGAACGCC 685
consensus_6371#1      GATGAACACCTTGTTCATCCACTGCTCCGCGTCGAGCGGCCAGCACACCATTGGAACGCC 740
                      ************************************************************

consensus_6371#0      GGCTGCGACAGCCTCCAGCGTCGAGTTCCATCCACAGTGCGTCACGAATGCGCCCGTGGA 745
consensus_6371#1      GGCTGCGACAGCCTCCAGCGTCGAGTTCCATCCACAGTGCGTCACGAATGCGCCCGTGGA 800
                      ************************************************************

consensus_6371#0      TGCGTGCTGCAGCACCGCCACCTGCGGCACCCAGGACGCGGTCACCACGACGCCTCTGTC 805
consensus_6371#1      TGCGTGCTGCAGCACCGCCACCTGCGGCACCCAGGACGCGGTCACCACGACGCCTCTGTC 860
                      ************************************************************

consensus_6371#0      GGCTGTCCGCGCCAAGAATCCGTCAGGAAGAAGAGACATCGCGGCGTCCGGCTTCGTGCC 865
consensus_6371#1      GGCTGTCCGCGCCAAGAATCCGTCAGGAAGAAGAGACATCGCGGCGTCCGGCTTCGTGCC 920
                      ************************************************************

consensus_6371#0      CGCGGGCGCGCGCAGCGCCCACAAGAATCTCTGCTCGGACCTCTCGAGGCCCGTGGCCAT 925
consensus_6371#1      CGCGGGCGCGCGCAGCGCCCACAAGAATCTCTGCTCGGACCTCTCGAGGCCCGTGGCCAT 980
                      ************************************************************

consensus_6371#0      CTCGCTGACCTGCTCCGGCGAGAGCGCGCCGCGGCTCCCGAAGCAGAGGAACACGACGCT 985
consensus_6371#1      CTCGCTGACCTGCTCCGGCGAGAGCGCGCCGCGGCTCCCGAAGCAGAGGAACACGACGCT 1040
                      ************************************************************

consensus_6371#0      GCGCTCCGGCTGCGCGTCCAGCCAAGCGAGGCACGGGTGCCTCTCCTCCTCCGCGCCGCC 1045
consensus_6371#1      GCGCTCCGGCTGCGCGTCCAGCCAAGCGAGGCACGGGTGCCTCTCCTCCTCCGCGCCGCC 1100
                      ************************************************************

consensus_6371#0      GTTGGTGATCAATGGCCCGACGCAGTAGACCGGCGGCGTGGCGCGGTTGGAGAGGCAGCG 1105
consensus_6371#1      GTCGGTGATCAATGGCCCGACGCAGTAGACCGGCGGCGTGGCGCGGTTGGAGAGGCAGCG 1160
                      ** *********************************************************

consensus_6371#0      GCCGTCCCTCAGCGCCGCCACCCCGGGACCCTCCAGCGCGTCGAAGGTGTTCACCAGAAT 1165
consensus_6371#1      GCCGTCCCTCAGCGCCGCCACCCCGGGACCCTCCAGCGCGTCGAAGGTGTTCACCAGAAT 1220
                      ************************************************************

consensus_6371#0      GCCGCGCGCGTCCGCCATCCGGTCGAACGCGTCCAGCATGGCCGCGCTTATGTCCGTCCC 1225
consensus_6371#1      GCCGCGCGCGTCCGCCATCCGGTCGAACGCGTCCAGCATGGCCGCGCTTATGTCCGTCCC 1280
                      ************************************************************

consensus_6371#0      ACGGTCGAGCACCTCCTCGGGCAAGTGCGACGCCGGCAGCGGGCGCACGCCGGGAAACGA 1285
consensus_6371#1      ACGGTCGAGCACCTCCTCGGGCAAGTGCGACGCCGGCAGCGGGCGCACGCCGGGGAACGA 1340
                      ****************************************************** *****

consensus_6371#0      CACGGGCGCGTCGCCGAGCTCCCTCAAGCTTCCGCTGCTCCCGGCGCAAAACCGTGGCAA 1345
consensus_6371#1      CACGGGCGCGTCGCCGAGCTCCCTCAAGCTTCCGCTGCTCCCGGCGCAAAACCGTGGCAA 1400
                      ************************************************************

consensus_6371#0      ACGGAGGAAAACGGCGAGGTTGGTGGCGCCGGTGCAGAAGAGGAGGTACCCGGGGACGCC 1405
consensus_6371#1      ACGGAGGAAAACGGCGAGGTTGGTGGCGCCGGTGCAGAAGAGGAGGTACCCGGGGACGCC 1460
                      ************************************************************

consensus_6371#0      GAGCTCGGCGGCGACGTCGAGGGCGTAGACGGAGAACATGTCGGCCACGAGCGCCCGAGC 1465
consensus_6371#1      GAGCTCGGCGGCGACGTCGAGGGCGTAGACGGAGAACATGTCGGCCACGAGCGCCCGAGC 1520
                      ************************************************************

consensus_6371#0      GGCATGGGGGCCACGCAGCAGGTCCCCGAGGGCGGGCGCGTGGGCGCGGAGGACGGCGAG 1525
consensus_6371#1      GGCATGGGGGCCACGCAGCAGGTCCCCGAGGGCGGGCGCGTGGGCGCGGAGGACGGCGAG 1580
                      ************************************************************

consensus_6371#0      CATACGGAGGAGCGGGTGAGCGGCGGCATCGGCGCCGGAGGAGGCAGGAGGATGAGGAGG 1585
consensus_6371#1      CATACGGAGGAGCGGGTGAGCGGCGGCATCGGCGCCGGAGGAGGCAGGAGGATGAGGAGG 1640
                      ************************************************************

consensus_6371#0      AGGAGGGAGTGGATGGACGGAGAGGGAGGGGAGGCGGGATGCGTACTTGCGGAGCGCGGC 1645
consensus_6371#1      AGGAGGGAGTGGATGGACGGAGAGGGAGGGGAGGCGGGATGCGTACTTGCGGAGCGCGGC 1700
                      ************************************************************

consensus_6371#0      GGAGAAGGCGGGGGCGGTGGTGGCCGGGTCAGGGACGGCGACCGTGACGGCGAGGCCGTG 1705
consensus_6371#1      GGAGAAGGCGGGGGCGGTGGTGGCCGGGTCAGGGACGGCGACCGTGACGGCGAGGCCGTG 1760
                      ************************************************************

consensus_6371#0      GCGGATGCAAACCGCGGCGAGCTCCAGCATGGGGGCGAGATGGCCCACGCCGAGGCTGGG 1765
consensus_6371#1      GCGGATGCAAACCGCGGCGAGCTCCAGCATGGGGGCGAGATGGCCCACGCCGAGGCTGGG 1820
                      ************************************************************

consensus_6371#0      GAACAAGACCACTCTCCTTGCAGCCGCCATTGGAGGATCGCTGCTCACCTCTGCTCTTGC 1825
consensus_6371#1      GAACAAGACCACTCTCCTTGCAGCCGCCATTGGAGGATCGCTGCTCACCTCTGCTCTTGC 1880
                      ************************************************************

consensus_6371#0      CTTTCTTGAATTCTTGGTGGGCAATCCGCGACGGATAGAGACGATGCACTACTAATCAAT 1885
consensus_6371#1      CTTTCTTGAATTCTTGGTG----------------------------------------- 1899
                      *******************                                         

consensus_6371#0      CTGAGGGACTTTCTGCCCTTTCTTTTTCATTTTTTTCCCCTTCTTTCGTGTGGACTAGCG 1945
consensus_6371#1      ------------------------------------------------------------
                                                                                  

consensus_6371#0      TGGCGTGGTTGCTTTTCCGTTTTTGTTTAATCATCACTGTCAAATATATACACATATCAC 2005
consensus_6371#1      ------------------------------------------------------------
                                                                                  

consensus_6371#0      TGTATCTGTTCAACTAATGACCTAACTTTCT 2036
consensus_6371#1      -------------------------------
                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)