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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6378#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2464 fasta sequence
[AGTACCGGTTGGCTCCTACTCTGGTTTCTGGCTTCTGGGACGGCCTCGAGTCCGCCGCTGTCTGTCTCCACCTTTGCCCCCCATCCTAAAATTTCGAACGCAGCCATGGCCGCATAGCCCTTCGCCCCAAGTTCAAACACCTCGCTCTCTCTCTCTCTCTCTCTGCCCGTACACTCGGCGCATCGCCTCCTCAGGCGGCAACAGCGGCGGCGGCGGCGATGGAGTTCCAGCAGGGCGGCGGGGGCGGTTGCGGTGGCGGCAAGGCGCGGGACAAGTTCTCGGTCTACCGGAACCCGTCCCTCGCCCGCGCGCTCGCCTCCCGCAGCGTCCGCCCCTCCCTCCCGGTCCTCGTCCTCCTGGCGCTGTCCCCCATCGCCTCCCCCTCCTCCATCCTCGTCCTCTCCTCCTGGGAAGGGCAGCTCGTGAAGGTCGCATGGCCGCGTGGGCCTCTCCGTGGCTGCTGCCGAGCTTGTCTTTAGGTTGATTGAGGCAGCCCTGGGTCTGGTCGCACTTTTTACACTGCCGGCTTTCTTCAGGGCGGTGATGCTCTACAATGGGAAGAGGGCACTTGCCCAAAGAGGACAAGGTTGTGTTATCTGAACGCCAACTGGGGCTTCTCGGGTTAAAGATGACAGGTTCAGAAGCAGGTGGCACCAGTGAGAAAACCAAAAGGCCTCCCAAGGCAAAGCCATCGACTCCGTCAGAGCCAATTGTTCCGATTAGGAGGTCTTCGTTCAGCTATACGCCATCTCGGTCTTTAGGGCAATCAAGGATTGGTTCCAGCAATTTGAGCCCTGGTGGTGAGAGACTGACCACATCAGTGCAAATATCACCTTCCACTCCACTACAAAAGCCTATTTCTTCACCTTCAACCCCATGGTCTAGGAAAAGCTCAGGCAGTGCGAAGGGCATACAGACAGAGGCGATGTTGGAGCAGTTCTTGGCTGGTTTGGACGAAAATATTGACACAATCACAGATTCAGCCAGTAAGATTGCAACACCTCCCGCAACCATTACGAGCTTTGGTGCTGCAAGCCCTGTATCAGTCATTACATCAACCACCCCTTCTGGTGCTGCAAGAAGCACACCTTTGAGGGCTGTGAGGATGTCTCCTGGCTCCCATCAGAAGTACAGCACGCCACCAAAAAAAGGCGAGGGTGAGCTTCCACCTCCAATGTCATTAGAGCAGGCAGTGAATGCCTTTGAAAATTTGGGTGTATACCCTGAGATTGAGCAATGGCGAGATAATCTCAGGCAGTGGTTCTCTTCTGTTTTGATGAACCCACTTGTCCAAAAGATCAAAACTAGCCATATTCAGGTTAAGCAAACAACCGCTACTGTTGGGGCTTCAGTTACTGTTAGCCAGGTTGGAAGTGATCTTCCAAGCACAACAGCGCCGGTTGGCTTATCTCCACTTGGTGGGACTAAAGATTGGCAACCGACTATCACGGTTGATGAAGATGGCATTCTTAATCAATTGCGCACTGCACTTCTGCATTCCCGTGATACGCCTGTTGCACAAACCTTTGGCAGTCCACAACAACCACAACAGAATCCCCTCCTTCCGTCTATTCAAGCATGTATTGATGCAATTACGGAGCACCAGAGGCTTAACACACTGATGAAGGGAGAGCTGATAAAAGGCTTGCTACCACAGAGTAGTGTCCATGCTGATTACACTGTTAAGAGAGTTCAAGAACTTGCTGAAGGAACATGCTTGAAGAATTATGATTATATGGGTCATGGAGATGGTTGCGGTAAATTGGAGAAAAAGTGGATCAGTGAACTGCCAACTGACTCGCTCCTTCTTCTGTACTTGTTTGCTGCTTTCCTCGAACACCCAAAATGGATGCTTCATGTTGATCCTACCTCTTACTCTGGTGCCCAATCTAGCAAAAATCCTTTATTTCTAGGAGTTCTTCCACCAAAAGAGAGGTTTCCAGAGAAGTATGTTGCTTTGATTTCCGGCGTTCCAGCAGTTATTCACCCAGGTGCTCTTATACTGGCTGTGGGCAAGCAGAGTCCTCCGATTTTTGCTCTGTACTGGGACAAAAAGTTGCAGTTTTCTCTTCAGGGAAGAACGGCATTGTGGGATGCTATCTTGCTTCTGTGCCACCAAATAAATGTTGGTTATGGCGGTGTAGTTAGGGGAATCCACATAGGTTCTTCCGCCTTGAACATCCTGTCAGTTCTTGATTCAGACATGGAAAGCTGAAGGACTGCGTGCTGCTTGCCTGATATCACATCAGCAGGAGCTAAAGATGGTTTTGTAGTTTGTACTTTGAGGAGATAAATTATGATCAGCCAGTTGCTGAATGTAAACTAACACCAGCATGCTTCGAACTAACCTACTGTTAGATCTGATTTGTCCTGGTGAAGTGACAGCTGAATTTGTGCCCCAGGTTGTACTAGTATCTTGCTCTTGAATAGGGCATAGTCCAAGTTCCTTAATTATCCCTTAACC]
[+] EMBL AK072700 [AGTACCGGTTGGCTCCTACTCTGGTTTCTGGCTTCTGGGACGGCCTCGAGTCCGCCGCTGTCTGTCTCCACCTTTGCCCCCCATCCTAAAATTTCGAACGCAGCCATGGCCGCATAGCCCTTCGCCCCAAGTTCAAACACCTCGCTCTCTCTCTCTCTCTCTCTGCCCGTACACTCGGCGCATCGCCTCCTCAGGCGGCAACAGCGGCGGCGGCGGCGATGGAGTTCCAGCAGGGCGGCGGGGGCGGTTGCGGTGGCGGCAAGGCGCGGGACAAGTTCTCGGTCTACCGGAACCCGTCCCTCGCCCGCGCGCTCGCCTCCCGCAGCGTCCGCCCCTCCCTCCCGGTCCTCGTCCTCCTGGCGCTGTCCCCCATCGCCTCCCCCTCCTCCATCCTCGTCCTCTCCTCCTGGGAAGGGCAGCTCGTGAAGGTCGCATGGCCGCGTGGGCCTCTCCGTGGCTGCTGCCGAGCTTGTCTTTAGGTTGATTGAGGCAGCCCTGGGTCTGGTCGCACTTTTTACACTGCCGGCTTTCTTCAGGGCGGTGATGCTCTACAATGGGAAGAGGGCACTTGCCCAAAGAGGACAAGGTTGTGTTATCTGAACGCCAACTGGGGCTTCTCGGGTTAAAGATGACAGGTTCAGAAGCAGGTGGCACCAGTGAGAAAACCAAAAGGCCTCCCAAGGCAAAGCCATCGACTCCGTCAGAGCCAATTGTTCCGATTAGGAGGTCTTCGTTCAGCTATACGCCATCTCGGTCTTTAGGGCAATCAAGGATTGGTTCCAGCAATTTGAGCCCTGGTGGTGAGAGACTGACCACATCAGTGCAAATATCACCTTCCACTCCACTACAAAAGCCTATTTCTTCACCTTCAACCCCATGGTCTAGGAAAAGCTCAGGCAGTGCGAAGGGCATACAGACAGAGGCGATGTTGGAGCAGTTCTTGGCTGGTTTGGACGAAAATATTGACACAATCACAGATTCAGCCAGTAAGATTGCAACACCTCCCGCAACCATTACGAGCTTTGGTGCTGCAAGCCCTGTATCAGTCATTACATCAACCACCCCTTCTGGTGCTGCAAGAAGCACACCTTTGAGGGCTGTGAGGATGTCTCCTGGCTCCCATCAGAAGTACAGCACGCCACCAAAAAAAGGCGAGGGTGAGCTTCCACCTCCAATGTCATTAGAGCAGGCAGTGAATGCCTTTGAAAATTTGGGTGTATACCCTGAGATTGAGCAATGGCGAGATAATCTCAGGCAGTGGTTCTCTTCTGTTTTGATGAACCCACTTGTCCAAAAGATCAAAACTAGCCATATTCAGGTTAAGCAAACAACCGCTACTGTTGGGGCTTCAGTTACTGTTAGCCAGGTTGGAAGTGATCTTCCAAGCACAACAGCGCCGGTTGGCTTATCTCCACTTGGTGGGACTAAAGATTGGCAACCGACTATCACGGTTGATGAAGATGGCATTCTTAATCAATTGCGCACTGCACTTCTGCATTCCCGTGATACGCCTGTTGCACAAACCTTTGGCAGTCCACAACAACCACAACAGAATCCCCTCCTTCCGTCTATTCAAGCATGTATTGATGCAATTACGGAGCACCAGAGGCTTAACACACTGATGAAGGGAGAGCTGATAAAAGGCTTGCTACCACAGAGTAGTGTCCATGCTGATTACACTGTTAAGAGAGTTCAAGAACTTGCTGAAGGAACATGCTTGAAGAATTATGATTATATGGGTCATGGAGATGGTTGCGGTAAATTGGAGAAAAAGTGGATCAGTGAACTGCCAACTGACTCGCTCCTTCTTCTGTACTTGTTTGCTGCTTTCCTCGAACACCCAAAATGGATGCTTCATGTTGATCCTACCTCTTACTCTGGTGCCCAATCTAGCAAAAATCCTTTATTTCTAGGAGTTCTTCCACCAAAAGAGAGGTTTCCAGAGAAGTATGTTGCTTTGATTTCCGGCGTTCCAGCAGTTATTCACCCAGGTGCTCTTATACTGGCTGTGGGCAAGCAGAGTCCTCCGATTTTTGCTCTGTACTGGGACAAAAAGTTGCAGTTTTCTCTTCAGGGAAGAACGGCATTGTGGGATGCTATCTTGCTTCTGTGCCACCAAATAAATGTTGGTTATGGCGGTGTAGTTAGGGGAATCCACATAGGTTCTTCCGCCTTGAACATCCTGTCAGTTCTTGATTCAGACATGGAAAGCTGAAGGACTGCGTGCTGCTTGCCTGATATCACATCAGCAGGAGCTAAAGATGGTTTTGTAGTTTGTACTTTGAGGAGATAAATTATGATCAGCCAGTTGCTGAATGTAAACTAACACCAGCATGCTTCGAACTAACCTACTGTTAGATCTGATTTGTCCTGGTGAAGTGACAGCTGAA ]
[-] EMBL CB623239 [ GTTCAAGAACTTGCTGAAGGAACATGCTTGAAGAATTATGATTATATGGGTCATGGAGATGGTTGCGGTAAATTGGAGAAAAAGTGGATCAGTGAACTGCCAACTGACTCGCTCCTTCTTCTGTACTTGTTTGCTGCTTTCCTCGAACACCCAAAATGGATGCTTCATGTTGATCCTACCTCTTACTCTGGTGCCCAATCTAGCAAAAATCCTTTATTTCTAGGAGTTCTTCCACCAAAAGAGAGGTTTCCAGAGAAGTATGTTGCTTTGATTTCCGGCGTTCCAGCAGTTATTCACCCAGGTGCTCTTATACTGGCTGTGGGCAAGCAGAGTCCTCCGATTTTTGCTCTGTACTGGGACAAAAAGTTGCAGTTTTCTCTTCAGGGAAGAACGGCATTGTGGGATGCTATCTTGCTTCTGTGCCACCAAATAAATGTTGGTTATAGCGGTGTAGTTAGGGGAATCCACATAGGTTCTTCCGCCTTGAACATCC GTCAGTTCTTGATTCAGACATGGAAAGCTGAAGGACTGCGTGCTGCTTGCCTGATATCACATCAGCAGGAGCTAAAGATGGTTTTGTAGTTTGTACTTTGAGGAGATAAATTGTGATCAGCCAGTTGCTGAATGTAAACTAACACCAGCATGCTTCGAACTAACCTACTGTTAGATCTGATTTGTCCTGGTGAAGAGACAGCTGAATTTGTGCCCCAGGTTGTACTAGTATCTTGCTCTTGAATAGGGCATAGTCCAAGTTCCTTAATTATCCCTTAACC]
consensusID : consensus_6378#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 764 fasta sequence
[GAACTTGCTGAAGGAACATGCTTGAAGAATTATGATTATATGGGTCATGGAGATGGTTGCGGTAAATTGGAGAAAAAGTGGATCAGTGAACTGCCAACTGACTCGCTCCTTCTTCTGTACTTGTTTGCTGCTTTCCTCGAACACCCAAAATGGATGCTTCATGTTGATCCTACCTCTTACTCTGGTGCCCAATCTAGCAAAAATCCTTTATTTCTAGGAGTTCTTCCACCAAAAGAGAGGTTTCCAGAGAAGTATGTTGCTTTGATTTCCGGCGTTCCAGCAGTTATTCACCCAGGTGCTCTTATACTGGCTGTGGGCAAGCAGAGTCCTCCGATTTTTGCTCTGTACTGGGACAAAAAGTTGCAGTTTTCTCTTCAGGGAAGAACGGCATTGTGGGATGCTATCTTGCTTCTGTGCCACCAAATAAATGTTGGTTATAGCGGTGTAGTTAGGGGAATCCACATAGGTTCTTCCGCCTTGAACATCCGTCAGTTCTTGATTCAGACATGGAAAGCTGAAGGACTGCGTGCTGCTTGCCTGATATCACATCAGCAGGAGCTAAAGATGGTTTTGTAGTTTGTACTTTGAGGAGATAAATTGTGATCAGCCAGTTGCTGAATGTAAACTAACACCAGCATGCTTCGAACTAACCTACTGTTGGATCTGATTTGTCCTGGTGAAGAGACAGCTGAATTTGTGCCCCAGGTTGTANTAGTATATTGTTATTGAAAAGGCCGCCGCCGCCGCCGCCGCCGCTGTTGCCG]
[-] EMBL CB623238 [GAACTTGCTGAAGGAACATGCTTGAAGAATTATGATTATATGGGTCATGGAGATGGTTGCGGTAAATTGGAGAAAAAGTGGATCAGTGAACTGCCAACTGACTCGCTCCTTCTTCTGTACTTGTTTGCTGCTTTCCTCGAACACCCAAAATGGATGCTTCATGTTGATCCTACCTCTTACTCTGGTGCCCAATCTAGCAAAAATCCTTTATTTCTAGGAGTTCTTCCACCAAAAGAGAGGTTTCCAGAGAAGTATGTTGCTTTGATTTCCGGCGTTCCAGCAGTTATTCACCCAGGTGCTCTTATACTGGCTGTGGGCAAGCAGAGTCCTCCGATTTTTGCTCTGTACTGGGACAAAAAGTTGCAGTTTTCTCTTCAGGGAAGAACGGCATTGTGGGATGCTATCTTGCTTCTGTGCCACCAAATAAATGTTGGTTATAGCGGTGTAGTTAGGGGAATCCACATAGGTTCTTCCGCCTTGAACATCCGTCAGTTCTTGATTCAGACATGGAAAGCTGAAGGACTGCGTGCTGCTTGCCTGATATCACATCAGCAGGAGCTAAAGATGGTTTTGTAGTTTGTACTTTGAGGAGATAAATTGTGATCAGCCAGTTGCTGAATGTAAACTAACACCAGCATGCTTCGAACTAACCTACTGTTGGATCTGATTTGTCCTGGTGAAGAGACAGCTGAATTTGTGCCCCAGGTTGTANTAGTATATTGTTATTGAAAAGGCCGCCGCCGCCGCCGCCGCCGCTGTTGCCG]
consensusID : consensus_6378#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 728 fasta sequence
[GGACAGAANGGGGGACAAAGCTTTGGAGTCNCAACAACACAACAGAATCCCCTCCTTCCGTCTATTAAGNATGTATTGATGCNATTACNGAGNACCAGAGGGCTTAACACANCTGATGAAGGGAGAGNCTGATAAAAGGCTTGCTACCACAGAGTAGTGNCCGNGCTGATTACNCTGGTAAGAGAGNTCAAGAAGNTTGCTGAAGGAACNTGCTTGAAGAATTATGATTATATGGGTCATGGAGATGGTTGCGGNAAATTGGAGAAAAAGNGGATCAGNGAACCTGGCNACTGNNCTCGCTCCTTCTTCTGNACTTGGTTGGCTGNTTTCCTCGAACNCCCAAAATGGATGCTTCATGNTGATCCTACCTCTTACTCTGGTGCCCAATCTAGCAAAAATCCTTTATTTCTAGGAGNTCTTCCACCAAAAGAGAGGTTTCCAGAGAAGTATGGTGNTTTGATTTCCGGCGTTCCAGCAGTTATTCACCCAGGTGGCTCTTATACTGGCTGNGGGCAAGCAGAGTCCTCCGATTTTTGCTCTGNACTGGGACAAAAAGGTGCAGGTTTCTCTTCAGGGAAGAACCGGNTTGGGGGATGCTATCCTTGCTTCTGGGCCACCAAATAAATGGTGGGTATGGGGGGGNAGTTANGGGAATCCNCATANGGTTCTTTCCCGCTTGAACNTTCCTGGGCAGTTCNTGATTTAAACCTNGGAAAGCTGAAAGACCT]
[+] EMBL CA766566 [GGACAGAANGGGGGACAAAGCTTTGGAGTCNCAACAACACAACAGAATCCCCTCCTTCCGTCTATTAAGNATGTATTGATGCNATTACNGAGNACCAGAGGGCTTAACACANCTGATGAAGGGAGAGNCTGATAAAAGGCTTGCTACCACAGAGTAGTGNCCGNGCTGATTACNCTGGTAAGAGAGNTCAAGAAGNTTGCTGAAGGAACNTGCTTGAAGAATTATGATTATATGGGTCATGGAGATGGTTGCGGNAAATTGGAGAAAAAGNGGATCAGNGAACCTGGCNACTGNNCTCGCTCCTTCTTCTGNACTTGGTTGGCTGNTTTCCTCGAACNCCCAAAATGGATGCTTCATGNTGATCCTACCTCTTACTCTGGTGCCCAATCTAGCAAAAATCCTTTATTTCTAGGAGNTCTTCCACCAAAAGAGAGGTTTCCAGAGAAGTATGGTGNTTTGATTTCCGGCGTTCCAGCAGTTATTCACCCAGGTGGCTCTTATACTGGCTGNGGGCAAGCAGAGTCCTCCGATTTTTGCTCTGNACTGGGACAAAAAGGTGCAGGTTTCTCTTCAGGGAAGAACCGGNTTGGGGGATGCTATCCTTGCTTCTGGGCCACCAAATAAATGGTGGGTATGGGGGGGNAGTTANGGGAATCCNCATANGGTTCTTTCCCGCTTGAACNTTCCTGGGCAGTTCNTGATTTAAACCTNGGAAAGCTGAAAGACCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6378#0 AGTACCGGTTGGCTCCTACTCTGGTTTCTGGCTTCTGGGACGGCCTCGAGTCCGCCGCTG 60
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 TCTGTCTCCACCTTTGCCCCCCATCCTAAAATTTCGAACGCAGCCATGGCCGCATAGCCC 120
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 TTCGCCCCAAGTTCAAACACCTCGCTCTCTCTCTCTCTCTCTCTGCCCGTACACTCGGCG 180
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 CATCGCCTCCTCAGGCGGCAACAGCGGCGGCGGCGGCGATGGAGTTCCAGCAGGGCGGCG 240
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 GGGGCGGTTGCGGTGGCGGCAAGGCGCGGGACAAGTTCTCGGTCTACCGGAACCCGTCCC 300
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 TCGCCCGCGCGCTCGCCTCCCGCAGCGTCCGCCCCTCCCTCCCGGTCCTCGTCCTCCTGG 360
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 CGCTGTCCCCCATCGCCTCCCCCTCCTCCATCCTCGTCCTCTCCTCCTGGGAAGGGCAGC 420
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 TCGTGAAGGTCGCATGGCCGCGTGGGCCTCTCCGTGGCTGCTGCCGAGCTTGTCTTTAGG 480
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 TTGATTGAGGCAGCCCTGGGTCTGGTCGCACTTTTTACACTGCCGGCTTTCTTCAGGGCG 540
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 GTGATGCTCTACAATGGGAAGAGGGCACTTGCCCAAAGAGGACAAGGTTGTGTTATCTGA 600
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 ACGCCAACTGGGGCTTCTCGGGTTAAAGATGACAGGTTCAGAAGCAGGTGGCACCAGTGA 660
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 GAAAACCAAAAGGCCTCCCAAGGCAAAGCCATCGACTCCGTCAGAGCCAATTGTTCCGAT 720
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 TAGGAGGTCTTCGTTCAGCTATACGCCATCTCGGTCTTTAGGGCAATCAAGGATTGGTTC 780
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 CAGCAATTTGAGCCCTGGTGGTGAGAGACTGACCACATCAGTGCAAATATCACCTTCCAC 840
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 TCCACTACAAAAGCCTATTTCTTCACCTTCAACCCCATGGTCTAGGAAAAGCTCAGGCAG 900
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 TGCGAAGGGCATACAGACAGAGGCGATGTTGGAGCAGTTCTTGGCTGGTTTGGACGAAAA 960
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 TATTGACACAATCACAGATTCAGCCAGTAAGATTGCAACACCTCCCGCAACCATTACGAG 1020
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 CTTTGGTGCTGCAAGCCCTGTATCAGTCATTACATCAACCACCCCTTCTGGTGCTGCAAG 1080
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 AAGCACACCTTTGAGGGCTGTGAGGATGTCTCCTGGCTCCCATCAGAAGTACAGCACGCC 1140
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 ACCAAAAAAAGGCGAGGGTGAGCTTCCACCTCCAATGTCATTAGAGCAGGCAGTGAATGC 1200
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 CTTTGAAAATTTGGGTGTATACCCTGAGATTGAGCAATGGCGAGATAATCTCAGGCAGTG 1260
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 GTTCTCTTCTGTTTTGATGAACCCACTTGTCCAAAAGATCAAAACTAGCCATATTCAGGT 1320
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 TAAGCAAACAACCGCTACTGTTGGGGCTTCAGTTACTGTTAGCCAGGTTGGAAGTGATCT 1380
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 TCCAAGCACAACAGCGCCGGTTGGCTTATCTCCACTTGGTGGGACTAAAGATTGGCAACC 1440
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 GACTATCACGGTTGATGAAGATGGCATTCTTAATCAATTGCGCACTGCACTTCTGCATTC 1500
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 CCGTGATACGCCTGTTGCACAAACCTTTGGCAGTCCACAACAACCACAACAGAATCCCCT 1560
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 ----GGACAGAANGGGGGACAAAGCTTTGGAGTCNCAACAACACAACAGAATCCCCTCCT 56
consensus_6378#0 CCTTCCGTCTATTCAAGCATGTATTGATGCAATTACGGAGCACCAGAGGCTTAACACACT 1620
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 TCCGTCTATTAAGNATGTATTGATGCNATTACNGAGNACCAGAGGGCTTAACACANCTGA 116
consensus_6378#0 GATGAAGGGAGAGCTGATAAAAGGCTTGCTACCACAGAGTAGTGTCCATGCTGATTACAC 1680
consensus_6378#1 ------------------------------------------------------------
consensus_6378#2 TGAAGGGAGAGNCTGATAAAAGGCTTGCTACCACAGAGTAGTGNCCGNGCTGATTACNCT 176
consensus_6378#0 TGTTAAGAGAGTTCAAGAACTTGCTGAAGGAACATGCTTGAAGAATTATGATTATATGGG 1740
consensus_6378#1 ----------------GAACTTGCTGAAGGAACATGCTTGAAGAATTATGATTATATGGG 44
consensus_6378#2 GGTAAGAGAGNTCAAGAAGNTTGCTGAAGGAACNTGCTTGAAGAATTATGATTATATGGG 236
* ************* **************************
consensus_6378#0 TCATGGAGATGGTTGCGGTAAATTGGAGAAAAAGTGGATCAGTGAAC-TGCCAACTGAC- 1798
consensus_6378#1 TCATGGAGATGGTTGCGGTAAATTGGAGAAAAAGTGGATCAGTGAAC-TGCCAACTGAC- 102
consensus_6378#2 TCATGGAGATGGTTGCGGNAAATTGGAGAAAAAGNGGATCAGNGAACCTGGCNACTGNNC 296
****************** *************** ******* **** ** * ****
consensus_6378#0 TCGCTCCTTCTTCTGTACTTGTTTG-CTGCTTTCCTCGAACACCCAAAATGGATGCTTCA 1857
consensus_6378#1 TCGCTCCTTCTTCTGTACTTGTTTG-CTGCTTTCCTCGAACACCCAAAATGGATGCTTCA 161
consensus_6378#2 TCGCTCCTTCTTCTGNACTTGGTTGGCTGNTTTCCTCGAACNCCCAAAATGGATGCTTCA 356
*************** ***** *** *** *********** ******************
consensus_6378#0 TGTTGATCCTACCTCTTACTCTGGTGCCCAATCTAGCAAAAATCCTTTATTTCTAGGAGT 1917
consensus_6378#1 TGTTGATCCTACCTCTTACTCTGGTGCCCAATCTAGCAAAAATCCTTTATTTCTAGGAGT 221
consensus_6378#2 TGNTGATCCTACCTCTTACTCTGGTGCCCAATCTAGCAAAAATCCTTTATTTCTAGGAGN 416
** ********************************************************
consensus_6378#0 TCTTCCACCAAAAGAGAGGTTTCCAGAGAAGTATGTTGCTTTGATTTCCGGCGTTCCAGC 1977
consensus_6378#1 TCTTCCACCAAAAGAGAGGTTTCCAGAGAAGTATGTTGCTTTGATTTCCGGCGTTCCAGC 281
consensus_6378#2 TCTTCCACCAAAAGAGAGGTTTCCAGAGAAGTATGGTGNTTTGATTTCCGGCGTTCCAGC 476
*********************************** ** *********************
consensus_6378#0 AGTTATTCACCCAGGTG-CTCTTATACTGGCTGTGGGCAAGCAGAGTCCTCCGATTTTTG 2036
consensus_6378#1 AGTTATTCACCCAGGTG-CTCTTATACTGGCTGTGGGCAAGCAGAGTCCTCCGATTTTTG 340
consensus_6378#2 AGTTATTCACCCAGGTGGCTCTTATACTGGCTGNGGGCAAGCAGAGTCCTCCGATTTTTG 536
***************** *************** **************************
consensus_6378#0 CTCTGTACTGGGACAAAAAGTTGCAGTTTTCTCTTCAGGGAAGAACGGCATTGTGGGATG 2096
consensus_6378#1 CTCTGTACTGGGACAAAAAGTTGCAGTTTTCTCTTCAGGGAAGAACGGCATTGTGGGATG 400
consensus_6378#2 CTCTGNACTGGGACAAAAAGGTGCAGGTTTCTCTTCAGGGAAGAACCGGNTTGGGGGATG 596
***** ************** ***** ******************* * *** ******
consensus_6378#0 CTATC-TTGCTTCTGTGCCACCAAATAAATGTTGGTTATGGCGGTGTAGTTAGGGGAATC 2155
consensus_6378#1 CTATC-TTGCTTCTGTGCCACCAAATAAATGTTGGTTATAGCGGTGTAGTTAGGGGAATC 459
consensus_6378#2 CTATCCTTGCTTCTGGGCCACCAAATAAATGGTGGGTATGGGGGGGNAGTTANGGGAATC 656
***** ********* *************** *** *** * ** * ***** *******
consensus_6378#0 CACATAGG--TTCTTCCGCCTTGAACATCCT--GTCAGTTCTTGATTCAGACATGG-AAA 2210
consensus_6378#1 CACATAGG--TTCTTCCGCCTTGAACATCC---GTCAGTTCTTGATTCAGACATGG-AAA 513
consensus_6378#2 CNCATANGGTTCTTTCCCGCTTGAACNTTCCTGGGCAGTTCNTGATTTAAACCTNGGAAA 716
* **** * * **** ******* * * * ****** ***** * ** * * ***
consensus_6378#0 GCTGAAGGACTGCGTGCTGCTTGCCTGATATCACATCAGCAGGAGCTAAAGATGGTTTTG 2270
consensus_6378#1 GCTGAAGGACTGCGTGCTGCTTGCCTGATATCACATCAGCAGGAGCTAAAGATGGTTTTG 573
consensus_6378#2 GCTGAAAGACCT------------------------------------------------ 728
****** ***
consensus_6378#0 TAGTTTGTACTTTGAGGAGATAAATTATGATCAGCCAGTTGCTGAATGTAAACTAACACC 2330
consensus_6378#1 TAGTTTGTACTTTGAGGAGATAAATTGTGATCAGCCAGTTGCTGAATGTAAACTAACACC 633
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 AGCATGCTTCGAACTAACCTACTGTTAGATCTGATTTGTCCTGGTGAAGTGACAGCTGAA 2390
consensus_6378#1 AGCATGCTTCGAACTAACCTACTGTTGGATCTGATTTGTCCTGGTGAAGAGACAGCTGAA 693
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 TTTGTGCCCCAGGTTGTACTAGTATCTTGCTCTTGAATAGGGCATAGTCCAAGTT-CCTT 2449
consensus_6378#1 TTTGTGCCCCAGGTTGTANTAGTATATTGTTATTGAAAAGGCCGCCGCCGCCGCCGCCGC 753
consensus_6378#2 ------------------------------------------------------------
consensus_6378#0 AATTATCCCTTAACC 2464
consensus_6378#1 CGCTGTTGCCG---- 764
consensus_6378#2 ---------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||