cluster # 6381

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Oryza sativa
cluster # 6381 cluster # 6381 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6381#0 length = 2274 sequences # 4
consensusID : consensus_6381#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2274
fasta sequence
                              [TTTAACAATACCATGAAGTTGATGGTATTGATACAGATACCACCATGAAGTGAAGTTGATGAAAAGTGGTGCACCACAATAAGATATATTGACAAGATCAGAACCACAATTTGATTTTAGTTCCTGATGTAGAAGAGGGCAAGAAAAGATGGATGAGGAAGAGATTCATATTGCGGTTGGGAAGAACTTCAGAAAGGAGAAGGCTAACATCTTATGGGCTGCTGCAAGGTTCCCAAGGGCCACTATAGTTCTTGTTCATGTTCACTGGCCTTCCAAGTGGATGCCCTTCATGGGTGGCAAAGTTCTATATAAGTTTGCAGATGAAAAGGAGAAGGAGATGCATCGAGCCAAAGAAACGGATGCGATGGTCAAGATGTTGTCACAATACAAAAACCTTTGTGGATCAAGAAAGGTTAGGGCACATTACCTTTCACACGATGATGTTCTTGCTGGTGTTGTGAATCTGATAAAGAAGCTCAAAATTAAGAGAATTATCATTGGTTCAAGGAGCATGTCAAAGGAAGCGATGCTGCGCAAATGCTGTCAGGTTTGGGTGGTTATCAATGGAAAACACATGTGTACTAGCAATGATCATCTGGAACATACCGGGAGCATTGGATATGGAGGGAGCGCTGAATCTTTGGCATCTGTACATGAGCTGAGCGATGATTCAAATGGCTACACAACACCACCAAGTGATTTTGCAGATGAAATCATGTATGATGATGGGGTTATTCAAATGGATGGTGCTGATGAATTGGCAACGTGTGATGTGCAGGAAACCGAAACAAAGGATGAGGAAAGCATAGAAACAGGGGAACTAAATTCTTATGAGGAGGAGGGGGAGCACTCTTCCGGAGAGACTGCTCATAGAACTGATGAGATACAGAGTTTTAGAAGTACAACTGAAAGAGCTGAAGAACTGATGGAAGAAATAGACAAACTCCAAAGGAAACTGAAAGAGCTGCAAGAAGAGGATGATAGGAGCATCTTGTCACCTAGGCAAAAGGCTGCTGCTGCTTCACTGAAGAAGGAGAAGAGGCTATCAACAGGAAGATACCCAGAGCTGCAACTTCCACAACATATCTCACGGTTCTCCATGTCGATGATCAGTAAAGCAACGGGCAACTTCTGCTCAGGAAACCTGATAGGTGAAGGAGGCTATGGGCCAGTGTACAAGGGAAAACTGGGTGGCGTGGCAGTGGCCATCAAGCTGCTGAGACCCCATGGCAGGCAAGGATTTCCAGAGTACAAGCAGGAGGTTGTGGTGCTGAGTAGAATGGAGCATCCACACATAGTGAGGCTCATGGGCGTGTGCCCGGAGTCATGCGGGCTGGTGTACGAGCACCTGCCCAATGGCACCCTCTTGGACATCCTCTCCAACTCCAAGAGTCTGTCATGGAAGGATCGCGTGAGGATCCTCGGCGAGCAGCGTTCCGCGCTGGCCTACCTCCATTCCTGCCGCCCCCACGCCATCATCCACGCCGACCTCAAGCTCACCAACATCCTCCTCGACGCCGCCAACTCCAGCCGCCTCGGCGACTTCGGCACGGCGCGCGCGGTGCACGTCAAGCCGCTGCAGGACCAGGCGGACACCATCTGCCGCCGCACCAACCCCATGGGCACCACCGGCTACATGGACCCCGTCTTCTTCGTCACCGGCGAGCTCACCGCCGAGTCCGACGTCTACGCCTTCGGCGTCGTCGTCCTCCAGGTGCTCACCGGACTGCTCGACCTCAACATCGCCGACCAGGTGCGCGAGGCCCTCAAGATGGACGCCGTCCACTCCGTGCTGGACGCCTCCGCCGGGAGCTGGCCGGAGGTGCAGGCCGAGAAGCTGCTCCGCCTGGCGCTGCGCTGCTGCAGCCTGGAGAGGAAGCGGCGACCGGCAATCACGTGCGACGCTGAGTGGAGGTCGCTTGACATTATGCTCCGCATGGCAAATTCACCATCTAAATCTCGGAAATGGACTTCTATTTCTATTCATGCAACCTAGCCGTCGATAGTAATTACTACTCCTACAGTATAGGCGTATTTTTTTCTTTTTCTTTTTCTTTTTTCTTTTAAGAAAAACTAGGAGTAGCTAGCTACTTTTCAGTATGCATGTTGCCTGTGCATGTACATAAGGATAGGGGGTCTACGGTAGTCAACAGTCAAAGTGTCAAATAACCTGTTTTGTACTACTGTCAATGTAATTATTTTAGCATTATAATGGTTGCTCCAATTTTTCATCTTCAAGATTGCCATATGTATCAATGTATGCATCAATATGCT]

[+] EMBL CB643366             [TTTAACAATACCATGAAGTTGATGGTATTGATACAGATACCACCATGAAGTGAAGTTGATGAAAAGTGGTGCACCACAATAAGATATATTGACAAGATCAGAACCACAATTTGATTTTAGTTCCTGATGTAGAAGAGGGCAAGAAAAGATGGATGAGGAAGAGATTCATATTGCGGTTGGGAAGAACTTCAGAAAGGAGAAGGCTAACATCTTATGGGCTGCTGCAAGGTTCCCAAGGGCCACTATAGTTCTTGTTCATGTTCACTGGCCTTCCAAGTGGATGCCCTTCATGGGTGGCAAAGTTCTATATAAGTTTGCAGATGAAAAGGAGAAGGAGATGCATCGAGCCAAAGAAACGGATGCGATGGTCAAGATGTTGTCACAATACAAAAACCTTTGTGGATCAAGAAAGGTTAGGGCACATTACCTTTCACACGATGATGTTCTTGCTGGTGTTGTGAATCTGATAAAGAAGCTCAAAATTAAGAGAATTATCATTGGTTCAAGGAGCATGTCAAAGGAAGCGATGCTGCGCAAATGCTGTCAGGTTTGGGTGGTTATCAATGGAAAACACATGTGTACTAGCAATGATCATCTGGAACATACCGGGAGCATTGGATATGGAGGGAGCGCTGAATCTTTGGCATCTGTACATGAGCTGAGCGATGATTCAAATGGCTACACAACACCACCAAGTGATTTTGCAGATGAAATCATGTATGATGATGGGGTTATTCAAATGGATGGTGCTGATGAATTGGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF326443             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          tttagGCAGATGAAATCATGTATGATGATGGGGTTATTCAAATGGATGGTGCTGATGAATTGGCAACGTGTGATGTGCAGGAAACCGAAACAAAGGATGAGGAAAGCATAGAAACAGGGGAACTAAATTCTTATGAGGAGGAGGGGGAGCACTCTTCCGGAGAGACTGCTCATAGAACTGATGAGATACAGAGTTTTAGAAGTACAACTGAAAGAGCTGAAGAACTGATGGAAGAAATAGACAAACTCCAAAGGAAACTGAAAGAGCTGCAAGAAGAGGATGATAGGAGCATCTTGTCACCTAGGCAAAAGGCTGCTGCTGCTTCACTGAAGAAGGAGAAGAGGCTATCAACAGGAAGATACCCAGAGCTGCAACTTCCACAACATATCTCACGGTTCTCCATGTCGATGATCAGTAAAGCAACGGGCAACTTCTGCTCAGGAAACCTGATAGGTGAAGGAGGCTATGGGCCAGTGTACAAGGGAAAACTGGGTGGCGTGGCAGTGGCCATCAAGCTGCTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK061135             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAGCTGAAGAACTGATGGAAGAAATAGACAAACTCCAAAGGAAACTGAAAGAGCTGCAAGAAGAGGATGATAGGAGCATCTTGTCACCTAGGCAAAAGGCTGCTGCTGCTTCACTGAAGAAGGAGAAGAGGCTATCAACAGGAAGATACCCAGAGCTGCAACTTCCACAACATATCTCACGGTTCTCCATGTCGATGATCAGTAAAGCAACGGGCAACTTCTGCTCAGGAAACCTGATAGGTGAAGGAGGCTATGGGCCAGTGTACAAGGGAAAACTGGGTGGCGTGGCAGTGGCCATCAAGCTGCTGAGACCCCATGGCAGGCAAGGATTTCCAGAGTACAAGCAGGAGGTTGTGGTGCTGAGTAGAATGGAGCATCCACACATAGTGAGGCTCATGGGCGTGTGCCCGGAGTCATGCGGGCTGGTGTACGAGCACCTGCCCAATGGCACCCTCTTGGACATCCTCTCCAACTCCAAGAGTCTGTCATGGAAGGATCGCGTGAGGATCCTCGGCGAGCAGCGTTCCGCGCTGGCCTACCTCCATTCCTGCCGCCCCCACGCCATCATCCACGCCGACCTCAAGCTCACCAACATCCTCCTCGACGCCGCCAACTCCAGCCGCCTCGGCGACTTCGGCACGGCGCGCGCGGTGCACGTCAAGCCGCTGCAGGACCAGGCGGACACCATCTGCCGCCGCACCAACCCCATGGGCACCACCGGCTACATGGACCCCGTCTTCTTCGTCACCGGCGAGCTCACCGCCGAGTCCGACGTCTACGCCTTCGGCGTCGTCGTCCTCCAGGTGCTCACCGGACTGCTCGACCTCAACATCGCCGACCAGGTGCGCGAGGCCCTCAAGATGGACGCCGTCCACTCCGTGCTGGACGCCTCCGCCGGGAGCTGGCCGGAGGTGCAGGCCGAGAAGCTGCTCCGCCTGGCGCTGCGCTGCTGCAGCCTGGAGAGGAAGCGGCGACCGGCAATCACGTGCGACGCTGAGTGGAGGTCGCTTGACATTATGCTCCGCATGGCAAATTCACCATCTAAATCTCGGAAATGGACTTCTATTTCTATTCATGCAACCTAGCCGTCGATAGTAATTACTACTCCTACAGTATAGGCGTATTTTTTTCTTTTTCTTTTTCTTTTTTCTTTTAAGAAAAACTAGGAGTAGCTAGCTACTTTTCAGTATGCATGTTGCCTGTGCATGTACATAAGGATAGGGGGTCTACGGTAGTCAACAGTCAAAGTGTCAAATAACCTGTTTTGTACTACTGTCAATGTAATTATTTTAGCATTATAATGGTTGCTCCAATTTTTCATCTTCAAGATTGC                              ]
[+] EMBL AK059199             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAAACTGGGTGGCGTGGCAGTGGCCATCAAGCTGCTGAGACCCCATGGCAGGCAAGGATTTCCAGAGTACAAGCAGGAGGTTGTGGTGCTGAGTAGAATGGAGCATCCACACATAGTGAGGCTCATGGGCGTGTGCCCGGAGTCATGCGGGCTGGTGTACGAGCACCTGCCCAATGGCACCCTCTTGGACATCCTCTCCAACTCCAAGAGTCTGTCATGGAAGGATCGCGTGAGGATCCTCGGCGAGCAGCGTTCCGCGCTGGCCTACCTCCATTCCTGCCGCCCCCACGCCATCATCCACGCCGACCTCAAGCTCACCAACATCCTCCTCGACGCCGCCAACTCCAGCCGCCTCGGCGACTTCGGCACGGCGCGCGCGGTGCACGTCAAGCCGCTGCAGGACCAGGCGGACACCATCTGCCGCCGCACCAACCCCATGGGCACCACCGGCTACATGGACCCCGTCTTCTTCGTCACCGGCGAGCTCACCGCCGAGTCCGACGTCTACGCCTTCGGCGTCGTCGTCCTCCAGGTGCTCACCGGACTGCTCGACCTCAACATCGCCGACCAGGTGCGCGAGGCCCTCAAGATGGACGCCGTCCACTCCGTGCTGGACGCCTCCGCCGGGAGCTGGCCGGAGGTACAGGCCGAGAAGCTGCTCCGCCTGGCGCTGCGCTGCTGCAGCCTGGAGAGGAAGCGGCGACCGGCAATCACGTGCGACGCTGAGTGGAGGTCGCTTGACATTATGCTCCGCATGGCAAATTCACCATCTAAATCTCGGAAATGGACTTCTATTTCTATTCATGCAACCTAGCCGTCGATAGTAATTACTACTCCTACAGTATAGGCGTATTTTTTTCTTTTTCTTTTTCTTTTTTCTTTTAAGAAAAACTAGGAGTAGCTAGCTACTTTTCAGTATGCATGTTGCCTGTGCATGTACATAAGGATAGGGGGTCTACGGTAGTCAACAGTCAAAGTGTCAAATAACCTGTTTTGTACTACTGTCAATGTAATTATTTTAGCATTATAATGGTTGCTCCAATTTTTCATCTTCAAGATTGCCATATGTATCAATGTATGCATCAATATGCT]




>consensus_6381#0
TTTAACAATACCATGAAGTTGATGGTATTGATACAGATACCACCATGAAGTGAAGTTGAT
GAAAAGTGGTGCACCACAATAAGATATATTGACAAGATCAGAACCACAATTTGATTTTAG
TTCCTGATGTAGAAGAGGGCAAGAAAAGATGGATGAGGAAGAGATTCATATTGCGGTTGG
GAAGAACTTCAGAAAGGAGAAGGCTAACATCTTATGGGCTGCTGCAAGGTTCCCAAGGGC
CACTATAGTTCTTGTTCATGTTCACTGGCCTTCCAAGTGGATGCCCTTCATGGGTGGCAA
AGTTCTATATAAGTTTGCAGATGAAAAGGAGAAGGAGATGCATCGAGCCAAAGAAACGGA
TGCGATGGTCAAGATGTTGTCACAATACAAAAACCTTTGTGGATCAAGAAAGGTTAGGGC
ACATTACCTTTCACACGATGATGTTCTTGCTGGTGTTGTGAATCTGATAAAGAAGCTCAA
AATTAAGAGAATTATCATTGGTTCAAGGAGCATGTCAAAGGAAGCGATGCTGCGCAAATG
CTGTCAGGTTTGGGTGGTTATCAATGGAAAACACATGTGTACTAGCAATGATCATCTGGA
ACATACCGGGAGCATTGGATATGGAGGGAGCGCTGAATCTTTGGCATCTGTACATGAGCT
GAGCGATGATTCAAATGGCTACACAACACCACCAAGTGATTTTGCAGATGAAATCATGTA
TGATGATGGGGTTATTCAAATGGATGGTGCTGATGAATTGGCAACGTGTGATGTGCAGGA
AACCGAAACAAAGGATGAGGAAAGCATAGAAACAGGGGAACTAAATTCTTATGAGGAGGA
GGGGGAGCACTCTTCCGGAGAGACTGCTCATAGAACTGATGAGATACAGAGTTTTAGAAG
TACAACTGAAAGAGCTGAAGAACTGATGGAAGAAATAGACAAACTCCAAAGGAAACTGAA
AGAGCTGCAAGAAGAGGATGATAGGAGCATCTTGTCACCTAGGCAAAAGGCTGCTGCTGC
TTCACTGAAGAAGGAGAAGAGGCTATCAACAGGAAGATACCCAGAGCTGCAACTTCCACA
ACATATCTCACGGTTCTCCATGTCGATGATCAGTAAAGCAACGGGCAACTTCTGCTCAGG
AAACCTGATAGGTGAAGGAGGCTATGGGCCAGTGTACAAGGGAAAACTGGGTGGCGTGGC
AGTGGCCATCAAGCTGCTGAGACCCCATGGCAGGCAAGGATTTCCAGAGTACAAGCAGGA
GGTTGTGGTGCTGAGTAGAATGGAGCATCCACACATAGTGAGGCTCATGGGCGTGTGCCC
GGAGTCATGCGGGCTGGTGTACGAGCACCTGCCCAATGGCACCCTCTTGGACATCCTCTC
CAACTCCAAGAGTCTGTCATGGAAGGATCGCGTGAGGATCCTCGGCGAGCAGCGTTCCGC
GCTGGCCTACCTCCATTCCTGCCGCCCCCACGCCATCATCCACGCCGACCTCAAGCTCAC
CAACATCCTCCTCGACGCCGCCAACTCCAGCCGCCTCGGCGACTTCGGCACGGCGCGCGC
GGTGCACGTCAAGCCGCTGCAGGACCAGGCGGACACCATCTGCCGCCGCACCAACCCCAT
GGGCACCACCGGCTACATGGACCCCGTCTTCTTCGTCACCGGCGAGCTCACCGCCGAGTC
CGACGTCTACGCCTTCGGCGTCGTCGTCCTCCAGGTGCTCACCGGACTGCTCGACCTCAA
CATCGCCGACCAGGTGCGCGAGGCCCTCAAGATGGACGCCGTCCACTCCGTGCTGGACGC
CTCCGCCGGGAGCTGGCCGGAGGTGCAGGCCGAGAAGCTGCTCCGCCTGGCGCTGCGCTG
CTGCAGCCTGGAGAGGAAGCGGCGACCGGCAATCACGTGCGACGCTGAGTGGAGGTCGCT
TGACATTATGCTCCGCATGGCAAATTCACCATCTAAATCTCGGAAATGGACTTCTATTTC
TATTCATGCAACCTAGCCGTCGATAGTAATTACTACTCCTACAGTATAGGCGTATTTTTT
TCTTTTTCTTTTTCTTTTTTCTTTTAAGAAAAACTAGGAGTAGCTAGCTACTTTTCAGTA
TGCATGTTGCCTGTGCATGTACATAAGGATAGGGGGTCTACGGTAGTCAACAGTCAAAGT
GTCAAATAACCTGTTTTGTACTACTGTCAATGTAATTATTTTAGCATTATAATGGTTGCT
CCAATTTTTCATCTTCAAGATTGCCATATGTATCAATGTATGCATCAATATGCT
clustalw multiple alignements is not computed in this case