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Oryza sativa
cluster # 6387 cluster # 6387       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6387#0 length = 1200 sequences # 4  
consensusID : consensus_6387#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1200
fasta sequence 
                              [AGGAGAAGGGAGATGATGAGCTTGCAGATTCCGGCGAGATCCGGAGGGCTCCGCCGCCTCCTCCTCCTCGGAGGGGCGGATGGGATCAGGAGGCCCTACTCCACGGGCGACCGCCGGCGCCGGGTGATCCGCGAGGCGCGGCAGGAGGAGGAGGACGAGGCCTTCCTCCGCACCCTCAACTTCAGCGCCGACCCGGAGAACAACCCCCCGCCACCGCCGCCGCCGCCGCCTCGACGACCCGGAGGTGCCCCCGACGACTCCTCCCCACACGCCGCGTTCCCCACCGACATCCTCCGACGCGCCGCCGGGAAACAGCCGTTGCCGCCGCCGCAGCAACCCATCGGGGAATCGCTGATGGAGAAGCTTAAGCTGGGCGACGCAGCCGCCACCTCCGCCGCGGGAAACAGCGGCGAGCGGCCGCAGCCTGAGCGCGAGCCGACGAAGCCGCCGCCGCCTGAGCACGAGGCGGCGCAGCCGGAGGACGTGGACGAGATCTTCAGGAAGATGAAGGAGACTGGGCTGATTCCGAACGCCGTCGCCATGCTCGACGGCCTGTGCAAGAGCGGGCTGGTGCAGGAGGCCATGAAGCTGTTCG-GTCTTATGCGAGAGAAGGGTTCCATCCCTGAGGTTGTCGTCTACACCGCGGTTGTCGAGGCTTTCTGCAAGGCACGCAAGCTTGACGATGCTGTGAGGATTTTCAAGAAGATGCA-GGGGAATGGGGTTATTCCGAACGCCTTCAGCTACTGGTTGCTAAT-ACAGGGGCTGTGCAAGG-G-TGGGAGGCTGGATGATGCAG-TTGCCTTCTGCGTGGAGATGTTTGAGGCTGGGCATTCGCCGAATGCCATGACCTTTGTGGGCTTGGTTGATGAGGTATGCAAGGCTAAGGGGGTAGAGGAGGCTGAGAAGCTCGTGAGGAGTTTCCAGGACAGGAACTTTGCCATTGATGAGAAGTCCATCAGGGAGCACTTGGACAAGAAAGGTCCATTCTCGCCGGTCATTTGGGAGGTG-ATCTTTGGAAAGAAGAAATCAGGCCGACCATTTTGAGCTTTGCCAAAAGTAGTATGTGCACATTCTCACCATTTTGTGTAGCTATCGCCAGTGATGCTTTTTTGAGAGTTAGTGTGCTTCTCTGGTTACATTAAAATGTTTAGCATGATGTTCTATGTAACAATCACTACTATGCAATCCCCAAGTCTGTCATCT]

[+] EMBL AK069340             [AGGAGAAGGGAGATGATGAGCTTGCAGATTCCGGCGAGATCCGGAGGGCTCCGCCGCCTCCTCCTCCTCGGAGGGGCGGATGGGATCAGGAGGCCCTACTCCACGGGCGACCGCCGGCGCCGGGTGATCCGCGAGGCGCGGCAGGAGGAGGAGGACGAGGCCTTCCTCCGCACCCTCAACTTCAGCGCCGACCCGGAGAACAACCCCCCGCCACCGCCGCCGCCGCCGCCTCGACGACCCGGAGGTGCCCCCGACGACTCCTCCCCACACGCCGCGTTCCCCACCGACATCCTCCGACGCGCCGCCGGGAAACAGCCGTTGCCGCCGCCGCAGCAACCCATCGGGGAATCGCTGATGGAGAAGCTTAAGCTGGGCGACGCAGCCGCCACCTCCGCCGCGGGAAACAGCGGCGAGCGGCCGCAGCCTGAGCGCGAGCCGACGAAGCCGCCGCCGCCTGAGCACGAGGCGGCGCAGCCGGAGGACGTGGACGAGATCTTCAGGAAGATGAAGGAGACTGGGCTGATTCCGAACGCCGTCGCCATGCTCGACGGCCTGTGCAAGAGCGGGCTGGTGCAGGAGGCCATGAAGCTGTTCG GTCTTATGCGAGAGAAGGGTTCCATCCCTGAGGTTGTCGTCTACACCGCGGTTGTCGAGGCTTTCTGCAAGGCACGCAAGCTTGACGATGCTGTGAGGATTTTCAAGAAGATGCA GGGGAATGGGGTTATTCCGAACGCCTTCAGCTACTGGTTGCTAAT ACAGGGGCTGTGCAAGG G TGGGAGGCTGGATGATGCAG TTGCCTTCTGCGTGGAGATGTTTGAGGCTGGGCATTCGCCGAATGCCATGACCTTTGTGGGCTTGGTTGATGAGGTATGCAAGGCTAAGGGGGTAGAGGAGGCTGAGAAGCTCGTGAGGAGTTTCCAGGACAGGAACTTTGCCATTGATGAGAAGTCCATCAGGGAGCACTTGGACAAGAAAGGTCCATTCTCGCCGGTCATTTGGGAGGTG ATCTTTGGAAAGAAGAAATCAGGCCGACCATTTTGAGCTTTGCCAAAAGTAGTATGTGCACATTCTCACCATTTTGTGTAGCTATCGCCAGTGATGCTTTTTTGAGAGTTAGTGTGCTTCTCTGGTTACATTAAAATGTTTAGCATGATGTTCTATGTAACAATCACTACTATGCAATCCCCAAGTCTGTCATCT]
[-] EMBL BI807836             [                                                                                                                                                                                                                                                                                                                                                                                                                                              GCGAGCCGACGAAGCCGCCGCCGCCTGAGCACGAGGCGGCGCAGCCGGAGGACGTGGACGAGATCTTCAGGAAGATGAAGGAGACTGGGCTGATTCCGAACGCCGTCGCCATGCTCGACGGCCTGTGCAAGAGCGGGCTGGTGCAGGAGGCCATGAAGCTGTTCGTGTCTTATGCGAGAGAAGGGTTCCATCCCTGAGGTTGTCGTCTACACCGCGGTTGTCGAGGCTTTCTGCAAGGCACTCAAGCTTGACGATGCTGTGAGGATTTTCAAGAAGATGCACGGGGAATGGGGTTATTCCGAACGCCTTCAGCTACTGGTTGCTAATCACAGGGGCTGTGCAAGGTGTTGGGAGGCTGGATGATGCAGTTTGCCTTCTGCGTGGAGATGTTTGAGGGTGGGCATTCGCCGAATGCCATGACCTTTGTAGGCTTGGTTGATGAGGTATGCAAGGCTAAGGGGGTAGAGGAGGCTGAG                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OS1321642            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      G G TGGGAGGCTGGATGATGCAG TTGCCTTCTGCGTGGAGATGTTTGAGGCTGGGCATTCG CGAATG CATGACCTTTGTGGGCTTGGTTGATGAGGTATGCAAGGCTAAGGGGGTAGAGGAGGCTGAGAANCTCGTGAGGAGTTTCCAGGACAGGAACTTTGCCATTGATGAGAAGTCCATCAGGGAGCACTTGGACAAGAAAGGTCCATTCTCGCCGGTCATTTGGGAGGTGAATCTTTGGAAAGAAGAAATCAGGCCG CCATTTTGAGCTTTG CAAAAGTAGTATGT CACATTCTCACCATTTTGTGTAnta                                                                                                                ]
[+] EMBL AU088741             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGGAGATGTTT AGGCTGG  A TCGCCG ATNCCATGACC TTGTGGCCTT GNTGATGAGGTATGCAAGGCTAAGGGGGTAGAGGAGGCTGAGAAGCTCGTGAGGAGTTTCCAGGACAGGAACTTTGCCATTGATGAGAAGTCCATCAGGGAGCACTTGGACAAGAAAGGTCCATTCTCGCCGGTCATTTGGGAGGTG ATCTTTGGAAAGAAGAAATCAGGCCGACCATTTTGAGCTTTGCCAAAAGTAGTATGTGCACATTCTCACCATTTTGTGTAG TATCGCCAGTGATGCTTTTTTGAGAGTTAGTGTGCTTCTCTGGTTACATTAAAATGTTTAGCATGATGTTCTATGTAACAATCACTACTATGCAATCCCC             ]




>consensus_6387#0
AGGAGAAGGGAGATGATGAGCTTGCAGATTCCGGCGAGATCCGGAGGGCTCCGCCGCCTC
CTCCTCCTCGGAGGGGCGGATGGGATCAGGAGGCCCTACTCCACGGGCGACCGCCGGCGC
CGGGTGATCCGCGAGGCGCGGCAGGAGGAGGAGGACGAGGCCTTCCTCCGCACCCTCAAC
TTCAGCGCCGACCCGGAGAACAACCCCCCGCCACCGCCGCCGCCGCCGCCTCGACGACCC
GGAGGTGCCCCCGACGACTCCTCCCCACACGCCGCGTTCCCCACCGACATCCTCCGACGC
GCCGCCGGGAAACAGCCGTTGCCGCCGCCGCAGCAACCCATCGGGGAATCGCTGATGGAG
AAGCTTAAGCTGGGCGACGCAGCCGCCACCTCCGCCGCGGGAAACAGCGGCGAGCGGCCG
CAGCCTGAGCGCGAGCCGACGAAGCCGCCGCCGCCTGAGCACGAGGCGGCGCAGCCGGAG
GACGTGGACGAGATCTTCAGGAAGATGAAGGAGACTGGGCTGATTCCGAACGCCGTCGCC
ATGCTCGACGGCCTGTGCAAGAGCGGGCTGGTGCAGGAGGCCATGAAGCTGTTCGGTCTT
ATGCGAGAGAAGGGTTCCATCCCTGAGGTTGTCGTCTACACCGCGGTTGTCGAGGCTTTC
TGCAAGGCACGCAAGCTTGACGATGCTGTGAGGATTTTCAAGAAGATGCAGGGGAATGGG
GTTATTCCGAACGCCTTCAGCTACTGGTTGCTAATACAGGGGCTGTGCAAGGGTGGGAGG
CTGGATGATGCAGTTGCCTTCTGCGTGGAGATGTTTGAGGCTGGGCATTCGCCGAATGCC
ATGACCTTTGTGGGCTTGGTTGATGAGGTATGCAAGGCTAAGGGGGTAGAGGAGGCTGAG
AAGCTCGTGAGGAGTTTCCAGGACAGGAACTTTGCCATTGATGAGAAGTCCATCAGGGAG
CACTTGGACAAGAAAGGTCCATTCTCGCCGGTCATTTGGGAGGTGATCTTTGGAAAGAAG
AAATCAGGCCGACCATTTTGAGCTTTGCCAAAAGTAGTATGTGCACATTCTCACCATTTT
GTGTAGCTATCGCCAGTGATGCTTTTTTGAGAGTTAGTGTGCTTCTCTGGTTACATTAAA
ATGTTTAGCATGATGTTCTATGTAACAATCACTACTATGCAATCCCCAAGTCTGTCATCT

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)