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Oryza sativa
cluster # 6388 cluster # 6388       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6388#0 length = 2100 sequences # 2  
consensus_6388#1 length = 2080 sequences # 2  

consensusID : consensus_6388#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2100
fasta sequence
                              [TGCCTCCATCCTAGCTAGGTAGCTATATCGTCGTCATTAATTGGAGCTAGCTAGGGAGGCAGCAGGCAGAGCGCAGGGGGGCGGCCGGGCGGCGAGGGAACCATGAGCAAAGGTGCTATCATCGGCGCTTCCACCGTGCTGGTGGTGGCGGTGGTGGCAGCCGTGTGCGTGGTGTCGTTCAAGAACGGCGGCGGCGGCAAGGAGGATGGCGAGCTGTCCACGTCGGTGAAGTCGGTGAAGGCCTTCTGCCAGCCGACGGACTACCAGCAGACGTGCGAGGAGGAGCTGGGGAAGGCCGCCGGCAATGGCGCCAGCTCGCCGACGGACCTGGCCAAGGCCATGTTCGCCGTGACGTCGGAGAAGATCTCCAAGGCCATCAGCGAGTCGTCGACGCTGGAGGAGCTCAAGAACGACAAGCGCACGTCGGGCGCCCTGC-AGAACTGCAAGGAGCTGCTGGAGTATGCCGTGGACGACCTCAAGACGTCGTTCGAGAAGCTCGGGGGGTTCGAGATGACCAACTTCCACAAGGCCGTGGACGACCTCCGCACCTGGCTCAGCGCCGCCCTCACCTACCAGGGCACCTGCCTCGACGGCTTCCTCAACACCACCACCGACGCCGCCGACAAGATGAAAAGCGCCCTCAACAGCTCGCAGGAGCTCACGGAGGACATCCTCGCCGTCGTCGACCAGTTCTCCGCCACGCTCGGCAGCCTCAACATCGGCCGCCGCCGCCTGCTCGCCGACGACGGCATGCCGGTGTGGATGTCGGAGGGCGGGAGGCGGCAGCTGCTGGAGGCGGCGGGGCCCGAGGCCGGGCCCGTGGAGTTCAAGCCGGACGTGACGGTGGCGGCGGACGGGAGCGGCGACGTGAAGACGATCGGCGAGGCGGTGGCGAAGGTGCCCCCGAAGAACAAGGAGCGGTACACCATCTACGTGAAGGCCGGGACGTACAATGAGTACGTGTCGGTGGGGCGGCCGGCGACGAACGTGAACATGATAGGCGACGGCATCGGGAAGACCATCATCACGGGGAACAAGAACTTCAAGATGAACCTGACGACCAAGGACACGGCGACGATGGAGGCGATCGGGAACGGCTTCTTCATGAGGGGGATCACGGTGGAGAACACGGCGGGGCCGGAGAACCACCAGGCGGTGGCTCTCCGCGCGCAGAGCGACATGGCGGTGTTCTACCAGTGCGAGTTCGACGGGTACCAGGACACGCTGTACCCGCACGCGCAGCGCCAGTTCTTCCGCGACTGCACAGTGTCGGGGACAATCGACTTCATATTCGGGAACTCGCAGGTTGTTCTTCAGAACTGCTTGCTCCAGCCTCGTAAGCCGATGGACAACCAGGTGAACATCATAACGGCGCAGGGGCGGCGGGAGAAGAGGTCGGCGGGAGGGACGGTGATCCACAACTGCACGGTGGCGCCGCACCCGGACCTGGAGAAGTTCACGGACAAGGTGAAGACGTACCTGGCGCGGCCGTGGAAGGAGTACTCGCGGACCATCTTCGTGCAGAACGAGATCGGGGCGGTGGTGGATCCGGTGGGGTGGCTGGAGTGGAACGGCAACTTCGCCCTGGACACCCTCTACTACGCGGAGGTTGACAACCATGGCCCCGGCGCCGACATGAGCAAGCGCGCCAAGTGGAAGGGCGTCCAGTCCCTCACCTACCAGGACGTCCAGAAGGAGTTCACCGTGGAGGCCTTCATCCAGGGCCAGGAGTTCATCCCCAAGTTCGGCGTCCCTTACATCCCCGGCCTTCTCCCCCAGACGCAGCAGGGCAGGATGCACTAATTTTTCACTCCTGTACTATAACCATCATCGCCCCAGCCCCCAGCCCGGACCTACGTACTACACACTATATATGGATCTTCGATCTCTCACTCACCTGCATCAATTGCCGGCCCCCATTATTTATTTTCATATACATATACTTGTTGTTATATATATATATGCATCTCACACATTCCAACTGCAGTCGCCGCGGTTGATTAACTAAATTAGTAGCTCGATCATGGAACATGCATATGCATGGATCTCGATTGTTTTGGGACTGGATCCAAAATGTATATAATGTATATTCAATCTCTT]

[+] EMBL AK071728             [TGCCTCCATCCTAGCTAGGTAGCTATATCGTCGTCATTAATTGGAGCTAGCTAGGGAGGCAGCAGGCAGAGCGCAGGGGGGCGGCCGGGCGGCGAGGGAACCATGAGCAAAGGTGCTATCATCGGCGCTTCCACCGTGCTGGTGGTGGCGGTGGTGGCAGCCGTGTGCGTGGTGTCGTTCAAGAACGGCGGCGGCGGCAAGGAGGATGGCGAGCTGTCCACGTCGGTGAAGTCGGTGAAGGCCTTCTGCCAGCCGACGGACTACCAGCAGACGTGCGAGGAGGAGCTGGGGAAGGCCGCCGGCAATGGCGCCAGCTCGCCGACGGACCTGGCCAAGGCCATGTTCGCCGTGACGTCGGAGAAGATCTCCAAGGCCATCAGCGAGTCGTCGACGCTGGAGGAGCTCAAGAACGACAAGCGCACGTCGGGCGCCCTGC AGAACTGCAAGGAGCTGCTGGAGTATGCCGTGGACGACCTCAAGACGTCGTTCGAGAAGCTCGGGGGGTTCGAGATGACCAACTTCCACAAGGCCGTGGACGACCTCCGCACCTGGCTCAGCGCCGCCCTCACCTACCAGGGCACCTGCCTCGACGGCTTCCTCAACACCACCACCGACGCCGCCGACAAGATGAAAAGCGCCCTCAACAGCTCGCAGGAGCTCACGGAGGACATCCTCGCCGTCGTCGACCAGTTCTCCGCCACGCTCGGCAGCCTCAACATCGGCCGCCGCCGCCTGCTCGCCGACGACGGCATGCCGGTGTGGATGTCGGAGGGCGGGAGGCGGCAGCTGCTGGAGGCGGCGGGGCCCGAGGCCGGGCCCGTGGAGTTCAAGCCGGACGTGACGGTGGCGGCGGACGGGAGCGGCGACGTGAAGACGATCGGCGAGGCGGTGGCGAAGGTGCCCCCGAAGAACAAGGAGCGGTACACCATCTACGTGAAGGCCGGGACGTACAATGAGTACGTGTCGGTGGGGCGGCCGGCGACGAACGTGAACATGATAGGCGACGGCATCGGGAAGACCATCATCACGGGGAACAAGAACTTCAAGATGAACCTGACGACCAAGGACACGGCGACGATGGAGGCGATCGGGAACGGCTTCTTCATGAGGGGGATCACGGTGGAGAACACGGCGGGGCCGGAGAACCACCAGGCGGTGGCTCTCCGCGCGCAGAGCGACATGGCGGTGTTCTACCAGTGCGAGTTCGACGGGTACCAGGACACGCTGTACCCGCACGCGCAGCGCCAGTTCTTCCGCGACTGCACAGTGTCGGGGACAATCGACTTCATATTCGGGAACTCGCAGGTTGTTCTTCAGAACTGCTTGCTCCAGCCTCGTAAGCCGATGGACAACCAGGTGAACATCATAACGGCGCAGGGGCGGCGGGAGAAGAGGTCGGCGGGAGGGACGGTGATCCACAACTGCACGGTGGCGCCGCACCCGGACCTGGAGAAGTTCACGGACAAGGTGAAGACGTACCTGGCGCGGCCGTGGAAGGAGTACTCGCGGACCATCTTCGTGCAGAACGAGATCGGGGCGGTGGTGGATCCGGTGGGGTGGCTGGAGTGGAACGGCAACTTCGCCCTGGACACCCTCTACTACGCGGAGGTTGACAACCATGGCCCCGGCGCCGACATGAGCAAGCGCGCCAAGTGGAAGGGCGTCCAGTCCCTCACCTACCAGGACGTCCAGAAGGAGTTCACCGTGGAGGCCTTCATCCAGGGCCAGGAGTTCATCCCCAAGTTCGGCGTCCCTTACATCCCCGGCCTTCTCCCCCAGACGCAGCAGGGCAGGATGCACTAATTTTTCACTCCTGTACTATAACCATCATCGCCCCAGCCCCCAGCCCGGACCTACGTACTACACACTATATATGGATCTTCGATCTCTCACTCACCTGCATCAATTGCCGGCCCCCATTATTTATTTTCATATACATATACTTGTTGTTATATATATATATGCATCTCACACATTCCAACTGCAGTCGCCGCGGTTGATTAACTAAATTAGTAGCTCGATCATGGAACATGCATATGCATGGATCTCGATTGTTTTGGGACTGGATCCAAAATGTATATAATGTATATTCAATCTCTT]
[+] EMBL C73169               [                                                                          AGGGGGGCGGCCGGGCGGCGAGGGAACCATGAGCAAAGGTGCTATCATCGGCGCTTCCACCGTGCTGGTGGTGGCGGTGGTGGCAGCCGTGTGCGTGGTGTCGTTCAAGAACGGCGGCGGCGGCAAGGAGGATGGCGAGCTGTCCACGTCGGTGAAGTCGGTGAAGGCCTTCTGCCAGCCGACGGACTACCAGCAGACGTGCGAGGAGGAGCTGGGGAAGGCCGCCGGCAATGGCGCCA CTCGCCGACGGACCTGGCCAAGGCCATGTTCGCCGTGACGTCGGAGAAGATCTCCAAGGCCATCAGCGAGTCGTCGACGCTGGAGGAGCTCAAGAACGACAAGCGCACGTCGGGCGCCCTGCAAGAACTTCAAGGAANTTCTGGAATATGCCGTGGACGACCTCAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]


>consensus_6388#0 TGCCTCCATCCTAGCTAGGTAGCTATATCGTCGTCATTAATTGGAGCTAGCTAGGGAGGC AGCAGGCAGAGCGCAGGGGGGCGGCCGGGCGGCGAGGGAACCATGAGCAAAGGTGCTATC ATCGGCGCTTCCACCGTGCTGGTGGTGGCGGTGGTGGCAGCCGTGTGCGTGGTGTCGTTC AAGAACGGCGGCGGCGGCAAGGAGGATGGCGAGCTGTCCACGTCGGTGAAGTCGGTGAAG GCCTTCTGCCAGCCGACGGACTACCAGCAGACGTGCGAGGAGGAGCTGGGGAAGGCCGCC GGCAATGGCGCCAGCTCGCCGACGGACCTGGCCAAGGCCATGTTCGCCGTGACGTCGGAG AAGATCTCCAAGGCCATCAGCGAGTCGTCGACGCTGGAGGAGCTCAAGAACGACAAGCGC ACGTCGGGCGCCCTGCAGAACTGCAAGGAGCTGCTGGAGTATGCCGTGGACGACCTCAAG ACGTCGTTCGAGAAGCTCGGGGGGTTCGAGATGACCAACTTCCACAAGGCCGTGGACGAC CTCCGCACCTGGCTCAGCGCCGCCCTCACCTACCAGGGCACCTGCCTCGACGGCTTCCTC AACACCACCACCGACGCCGCCGACAAGATGAAAAGCGCCCTCAACAGCTCGCAGGAGCTC ACGGAGGACATCCTCGCCGTCGTCGACCAGTTCTCCGCCACGCTCGGCAGCCTCAACATC GGCCGCCGCCGCCTGCTCGCCGACGACGGCATGCCGGTGTGGATGTCGGAGGGCGGGAGG CGGCAGCTGCTGGAGGCGGCGGGGCCCGAGGCCGGGCCCGTGGAGTTCAAGCCGGACGTG ACGGTGGCGGCGGACGGGAGCGGCGACGTGAAGACGATCGGCGAGGCGGTGGCGAAGGTG CCCCCGAAGAACAAGGAGCGGTACACCATCTACGTGAAGGCCGGGACGTACAATGAGTAC GTGTCGGTGGGGCGGCCGGCGACGAACGTGAACATGATAGGCGACGGCATCGGGAAGACC ATCATCACGGGGAACAAGAACTTCAAGATGAACCTGACGACCAAGGACACGGCGACGATG GAGGCGATCGGGAACGGCTTCTTCATGAGGGGGATCACGGTGGAGAACACGGCGGGGCCG GAGAACCACCAGGCGGTGGCTCTCCGCGCGCAGAGCGACATGGCGGTGTTCTACCAGTGC GAGTTCGACGGGTACCAGGACACGCTGTACCCGCACGCGCAGCGCCAGTTCTTCCGCGAC TGCACAGTGTCGGGGACAATCGACTTCATATTCGGGAACTCGCAGGTTGTTCTTCAGAAC TGCTTGCTCCAGCCTCGTAAGCCGATGGACAACCAGGTGAACATCATAACGGCGCAGGGG CGGCGGGAGAAGAGGTCGGCGGGAGGGACGGTGATCCACAACTGCACGGTGGCGCCGCAC CCGGACCTGGAGAAGTTCACGGACAAGGTGAAGACGTACCTGGCGCGGCCGTGGAAGGAG TACTCGCGGACCATCTTCGTGCAGAACGAGATCGGGGCGGTGGTGGATCCGGTGGGGTGG CTGGAGTGGAACGGCAACTTCGCCCTGGACACCCTCTACTACGCGGAGGTTGACAACCAT GGCCCCGGCGCCGACATGAGCAAGCGCGCCAAGTGGAAGGGCGTCCAGTCCCTCACCTAC CAGGACGTCCAGAAGGAGTTCACCGTGGAGGCCTTCATCCAGGGCCAGGAGTTCATCCCC AAGTTCGGCGTCCCTTACATCCCCGGCCTTCTCCCCCAGACGCAGCAGGGCAGGATGCAC TAATTTTTCACTCCTGTACTATAACCATCATCGCCCCAGCCCCCAGCCCGGACCTACGTA CTACACACTATATATGGATCTTCGATCTCTCACTCACCTGCATCAATTGCCGGCCCCCAT TATTTATTTTCATATACATATACTTGTTGTTATATATATATATGCATCTCACACATTCCA ACTGCAGTCGCCGCGGTTGATTAACTAAATTAGTAGCTCGATCATGGAACATGCATATGC ATGGATCTCGATTGTTTTGGGACTGGATCCAAAATGTATATAATGTATATTCAATCTCTT



consensusID : consensus_6388#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2080
fasta sequence
                              [GGGACGACGCATCGATCGATCCCGACGCCTTTGCGCGCGCGCGCAAAATCGATCATTTGATACATATCTCGCGTGAATCGTCGACTGGTGGTTGCATTGTGTTGCAATGAGCAAAGGCGCGATCATCGGCGCGTCGACCGTGCTGGTGGTGGCGGTGGTGGCGGCGGTGTGCGTGGTGTCGTTCAAGAACGGGTCGAGCAATGCCAAGGAGGACGGCGAGCTGTCGACGTCGGTGAAGTCGATCAAGTCGTTCTGCCAGCCGGTGGACTACCGGGAGACGTGCGAGACCACGCTGGAGCAGACGGCGGGCAACGCGACGAACCCGACGGACCTCGCCAAGGCCATCTTCAAGGCGACGTCGGAGCGGATCGAGAAGGCGGTGAGGGAGTCCGCCGTGCTCAACGACCTCAAGAACGACCCGCGCACGTCCGACGCGCTCAAGGACTGCGAGGAGCTGCTCGACTACGCCATCGACGACCTCAAGACGACGTTCGACAAGCTCGGCGGGTTCCAGACGAGCAACTTCAAGCGCGCCGTGGACGACGTCAAGACGTGGCTCAGCTCGGCGCTGACGTACCAGGAGACGTGCCTCGACGGGTTCGAGAACTCTACGTCGACGGAGGCGTCGGAGAAGATGCGCAAGGCGCTCAAGAGCTCGCAGGAGCTGACGGAGAACTTCCTCGCCATCGTGGACCAGTTCGCCGACACGCTGGCGAACCTGGACATCACCGGATTCAGCCGCCGGCTGCTCGGCGACGACGGCGTGCCCGTGTGGATGTCCAACGCGAAGCGCCGGCTGCTGGAGGCGACCCCGGGCTCCAAGGAGTTCAAGCCGGACGTGACGGTGGCGGCGGACGGCAGCGGCGACTTCAAGACCATCAATGAGGCGCTGGCCAAGGTGCCGGTCAAGAGCACGGGGACGTACGTGATGTACGTGAAGGCCGGGACGTACAAGGAGTACGTGTCGGTGGCGCGCAACGTGACGAACCTGGTGATGATCGGCGACGGCGCCACCAAGACCATCATCACGGGGAACAAGAGCTTCATGCTCAACATCACCACCAAGGACACGGCCACCATGGAGGCGATCGGCAACGGGTTCTTCATGCGCGGCATCGGCGTGGAGAACACGGCCGGGTCCAAGAACCACCAGGCGGTGGCGCTCCGCGTGCAGAGCGACCAGTCGGCGTTCTACGAGTGCCAGTTCGACGGGCACCAGGACACGCTCTACACCCACACCAGCAGGCAGTACTACCGCGACTGCACCATCACCGGCACCATCGACTTCATCTTCGGCAACGCGCAGGTGGTGCTCCAGAACTGCCGGATCCAGGTGCGCCGGTGCATGGACAACCAGCAGAACATCGTGACGGCGCAGGGGCGCAAGGAGAAGCACTCCGCGGGCGGCACGGTGATCCACAACTGCACCATCGAGCCGCACGAGGACTTCAAGGCCGACGCCGCCAAGTTCAAGACGTTCCTCGGCCGCCCGTGGAAGGAGTACTCGCGGACGCTCTACATCCAGTCCGACATCGGCGGGTTCATCGACCCGCAGGGGTGGCTGCCGTGGCTCGGCGACTTCGGCCTCAACACCTGCTACTACGCCGAGGTGGAGAACCGCGGCGACGGCGCCGACATGAGCAAGCGCGCCAAGTGGAGAGGGGTCAAGACGGTCACGTACCAGCAGGCGCAGCAGAAGTACACCGTCGAGAGGTTCATCCAGGGACAGACGTGGCTCCCAAAGTTCGGCGTGCCGTTCATCCCCGGCCTGTTGCCGCAGGAGCAGTCAGGGAGGATACACTGATCCATCGTGCGTCGTCTCGTCGGCCTATATATATGCTAGCGGGTAATTGTTTGCATCATGTTGCTGTCGTCGTCAACTCCTGTGATCTCTATAGCGTTCTCTGCTGTACTCTAATCCATAGAAATGCATTCTTTTCTCCATAGAATTTGCGTACGCGTAGTACATTGCATATACTAGTACTACTTAATTATATTTACGTGTTGTACGGGTTGTTACGAATCGATTATTGTTTTTACTGATCGACAAATGGTGAAACTAATAGATAAGGTTTGACAG]

[+] EMBL AK070513             [GGGACGACGCATCGATCGATCCCGACGCCTTTGCGCGCGCGCGCAAAATCGATCATTTGATACATATCTCGCGTGAATCGTCGACTGGTGGTTGCATTGTGTTGCAATGAGCAAAGGCGCGATCATCGGCGCGTCGACCGTGCTGGTGGTGGCGGTGGTGGCGGCGGTGTGCGTGGTGTCGTTCAAGAACGGGTCGAGCAATGCCAAGGAGGACGGCGAGCTGTCGACGTCGGTGAAGTCGATCAAGTCGTTCTGCCAGCCGGTGGACTACCGGGAGACGTGCGAGACCACGCTGGAGCAGACGGCGGGCAACGCGACGAACCCGACGGACCTCGCCAAGGCCATCTTCAAGGCGACGTCGGAGCGGATCGAGAAGGCGGTGAGGGAGTCCGCCGTGCTCAACGACCTCAAGAACGACCCGCGCACGTCCGACGCGCTCAAGGACTGCGAGGAGCTGCTCGACTACGCCATCGACGACCTCAAGACGACGTTCGACAAGCTCGGCGGGTTCCAGACGAGCAACTTCAAGCGCGCCGTGGACGACGTCAAGACGTGGCTCAGCTCGGCGCTGACGTACCAGGAGACGTGCCTCGACGGGTTCGAGAACTCTACGTCGACGGAGGCGTCGGAGAAGATGCGCAAGGCGCTCAAGAGCTCGCAGGAGCTGACGGAGAACTTCCTCGCCATCGTGGACCAGTTCGCCGACACGCTGGCGAACCTGGACATCACCGGATTCAGCCGCCGGCTGCTCGGCGACGACGGCGTGCCCGTGTGGATGTCCAACGCGAAGCGCCGGCTGCTGGAGGCGACCCCGGGCTCCAAGGAGTTCAAGCCGGACGTGACGGTGGCGGCGGACGGCAGCGGCGACTTCAAGACCATCAATGAGGCGCTGGCCAAGGTGCCGGTCAAGAGCACGGGGACGTACGTGATGTACGTGAAGGCCGGGACGTACAAGGAGTACGTGTCGGTGGCGCGCAACGTGACGAACCTGGTGATGATCGGCGACGGCGCCACCAAGACCATCATCACGGGGAACAAGAGCTTCATGCTCAACATCACCACCAAGGACACGGCCACCATGGAGGCGATCGGCAACGGGTTCTTCATGCGCGGCATCGGCGTGGAGAACACGGCCGGGTCCAAGAACCACCAGGCGGTGGCGCTCCGCGTGCAGAGCGACCAGTCGGCGTTCTACGAGTGCCAGTTCGACGGGCACCAGGACACGCTCTACACCCACACCAGCAGGCAGTACTACCGCGACTGCACCATCACCGGCACCATCGACTTCATCTTCGGCAACGCGCAGGTGGTGCTCCAGAACTGCCGGATCCAGGTGCGCCGGTGCATGGACAACCAGCAGAACATCGTGACGGCGCAGGGGCGCAAGGAGAAGCACTCCGCGGGCGGCACGGTGATCCACAACTGCACCATCGAGCCGCACGAGGACTTCAAGGCCGACGCCGCCAAGTTCAAGACGTTCCTCGGCCGCCCGTGGAAGGAGTACTCGCGGACGCTCTACATCCAGTCCGACATCGGCGGGTTCATCGACCCGCAGGGGTGGCTGCCGTGGCTCGGCGACTTCGGCCTCAACACCTGCTACTACGCCGAGGTGGAGAACCGCGGCGACGGCGCCGACATGAGCAAGCGCGCCAAGTGGAGAGGGGTCAAGACGGTCACGTACCAGCAGGCGCAGCAGAAGTACACCGTCGAGAGGTTCATCCAGGGACAGACGTGGCTCCCAAAGTTCGGCGTGCCGTTCATCCCCGGCCTGTTGCCGCAGGAGCAGTCAGGGAGGATACACTGATCCATCGTGCGTCGTCTCGTCGGCCTATATATATGCTAGCGGGTAATTGTTTGCATCATGTTGCTGTCGTCGTCAACTCCTGTGATCTCTATAGCGTTCTCTGCTGTACTCTAATCCATAGAAATGCATTCTTTTCTCCATAGAATTTGCGTACGCGTAGTACATTGCATATACTAGTACTACTTAATTATATTTACGTGTTGTACGGGTTGTTACGAATCGATTATTGTTTTTACTGATCGACAAATGGTGAAACTAATAGATAAGGTTTGACAG]
[+] EMBL CA766279             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GATGTACGTGAAGGCCGGGACGTACAAGGAGTACGTGTCGGTGGCGCGCAACGTGACGAACCTGGTGATGATCGGCGACGGCGCCACCAAGACCATCATCACGGGGAACAAGAGCTTCATGCTCAACATCACCACCAAGGACACGGCCACCATGGAGGCGATCGGCAACGGGTTCTTCATGCGCGGCATCGGCGTGGAGAACACGGCCGGGTCCAAGAACCACCAGGCGGTGGCGCTCCGCGTGCAGAGCGACCAGTCGGCGTTCTACGAGTGCCAGTTCGACGGGCACCAGGACACGCTCTACACCCACACCAGCAGGCAGTACTACCGCGACTGCACCATCACCGGCACCATCGACTTCATCTTCGGCAACGCGCAGGTGGTGCTCCAGAACTGCCGGATCCAGGTGCGCCGGTGCATGGACAACCAGCAGAACATCGTGACGGCGCAGGGGCGCAAGGAGAAGCACTCCGCGGGCGGCACGGTGATCCACAACTGCACCATCGAGCCGCACGAGGACTTCAAGGCCGACGCCGCCAAGTTCAAGACGTTCCTCGGCCGCCCGTGGAAGGAGTACTCGCGGACGCTCTACATCCAGTCCGACATCGGCGGGTTCATCGACCCGCAGGGGTGGCTGCCGTGGCTCGGCGACTTCGGCCTCAACACCTGCTACTACGCCGAGGTGGAGAACCGCGGCGACGGCGCCGACATGAGCAAGCGCGCCAGGTGGAGAGGGGTCAAGACGGTCACGTAC                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_6388#1 GGGACGACGCATCGATCGATCCCGACGCCTTTGCGCGCGCGCGCAAAATCGATCATTTGA TACATATCTCGCGTGAATCGTCGACTGGTGGTTGCATTGTGTTGCAATGAGCAAAGGCGC GATCATCGGCGCGTCGACCGTGCTGGTGGTGGCGGTGGTGGCGGCGGTGTGCGTGGTGTC GTTCAAGAACGGGTCGAGCAATGCCAAGGAGGACGGCGAGCTGTCGACGTCGGTGAAGTC GATCAAGTCGTTCTGCCAGCCGGTGGACTACCGGGAGACGTGCGAGACCACGCTGGAGCA GACGGCGGGCAACGCGACGAACCCGACGGACCTCGCCAAGGCCATCTTCAAGGCGACGTC GGAGCGGATCGAGAAGGCGGTGAGGGAGTCCGCCGTGCTCAACGACCTCAAGAACGACCC GCGCACGTCCGACGCGCTCAAGGACTGCGAGGAGCTGCTCGACTACGCCATCGACGACCT CAAGACGACGTTCGACAAGCTCGGCGGGTTCCAGACGAGCAACTTCAAGCGCGCCGTGGA CGACGTCAAGACGTGGCTCAGCTCGGCGCTGACGTACCAGGAGACGTGCCTCGACGGGTT CGAGAACTCTACGTCGACGGAGGCGTCGGAGAAGATGCGCAAGGCGCTCAAGAGCTCGCA GGAGCTGACGGAGAACTTCCTCGCCATCGTGGACCAGTTCGCCGACACGCTGGCGAACCT GGACATCACCGGATTCAGCCGCCGGCTGCTCGGCGACGACGGCGTGCCCGTGTGGATGTC CAACGCGAAGCGCCGGCTGCTGGAGGCGACCCCGGGCTCCAAGGAGTTCAAGCCGGACGT GACGGTGGCGGCGGACGGCAGCGGCGACTTCAAGACCATCAATGAGGCGCTGGCCAAGGT GCCGGTCAAGAGCACGGGGACGTACGTGATGTACGTGAAGGCCGGGACGTACAAGGAGTA CGTGTCGGTGGCGCGCAACGTGACGAACCTGGTGATGATCGGCGACGGCGCCACCAAGAC CATCATCACGGGGAACAAGAGCTTCATGCTCAACATCACCACCAAGGACACGGCCACCAT GGAGGCGATCGGCAACGGGTTCTTCATGCGCGGCATCGGCGTGGAGAACACGGCCGGGTC CAAGAACCACCAGGCGGTGGCGCTCCGCGTGCAGAGCGACCAGTCGGCGTTCTACGAGTG CCAGTTCGACGGGCACCAGGACACGCTCTACACCCACACCAGCAGGCAGTACTACCGCGA CTGCACCATCACCGGCACCATCGACTTCATCTTCGGCAACGCGCAGGTGGTGCTCCAGAA CTGCCGGATCCAGGTGCGCCGGTGCATGGACAACCAGCAGAACATCGTGACGGCGCAGGG GCGCAAGGAGAAGCACTCCGCGGGCGGCACGGTGATCCACAACTGCACCATCGAGCCGCA CGAGGACTTCAAGGCCGACGCCGCCAAGTTCAAGACGTTCCTCGGCCGCCCGTGGAAGGA GTACTCGCGGACGCTCTACATCCAGTCCGACATCGGCGGGTTCATCGACCCGCAGGGGTG GCTGCCGTGGCTCGGCGACTTCGGCCTCAACACCTGCTACTACGCCGAGGTGGAGAACCG CGGCGACGGCGCCGACATGAGCAAGCGCGCCAAGTGGAGAGGGGTCAAGACGGTCACGTA CCAGCAGGCGCAGCAGAAGTACACCGTCGAGAGGTTCATCCAGGGACAGACGTGGCTCCC AAAGTTCGGCGTGCCGTTCATCCCCGGCCTGTTGCCGCAGGAGCAGTCAGGGAGGATACA CTGATCCATCGTGCGTCGTCTCGTCGGCCTATATATATGCTAGCGGGTAATTGTTTGCAT CATGTTGCTGTCGTCGTCAACTCCTGTGATCTCTATAGCGTTCTCTGCTGTACTCTAATC CATAGAAATGCATTCTTTTCTCCATAGAATTTGCGTACGCGTAGTACATTGCATATACTA GTACTACTTAATTATATTTACGTGTTGTACGGGTTGTTACGAATCGATTATTGTTTTTAC TGATCGACAAATGGTGAAACTAATAGATAAGGTTTGACAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6388#0      -------TGCCTCCATCCTAGCTAGGTAGCTATATCGTCGT-CATTAATTGGAGCTAGCT 52
consensus_6388#1      GGGACGACGCATCGATCG-ATCCCGACGCCTTTGCGCGCGCGCGCAAAATCGATCATTTG 59
                              ** ** ***  * *  *    ** *     **  *   ** * ** *     

consensus_6388#0      AGGGAGGCAGCAGGCAGAGCGCAGGGGGGCGGCCGGGCGGCGAGGGAACCATGAGCAAAG 112
consensus_6388#1      ATACATATCTCGCGTGAATCGTCGACTGGTGGTTGCATTGTGTTGCA---ATGAGCAAAG 116
                      *   *     *  *   * **  *   ** **  *    * *  * *   **********

consensus_6388#0      GTGCTATCATCGGCGCTTCCACCGTGCTGGTGGTGGCGGTGGTGGCAGCCGTGTGCGTGG 172
consensus_6388#1      GCGCGATCATCGGCGCGTCGACCGTGCTGGTGGTGGCGGTGGTGGCGGCGGTGTGCGTGG 176
                      * ** *********** ** ************************** ** **********

consensus_6388#0      TGTCGTTCAAGAACGGC---GGCGGCGGCAAGGAGGATGGCGAGCTGTCCACGTCGGTGA 229
consensus_6388#1      TGTCGTTCAAGAACGGGTCGAGCAATGCCAAGGAGGACGGCGAGCTGTCGACGTCGGTGA 236
                      ****************     **   * ********* *********** **********

consensus_6388#0      AGTCGGTGAAGGCCTTCTGCCAGCCGACGGACTACCAGCAGACGTGCGAGGAGGAGCTGG 289
consensus_6388#1      AGTCGATCAAGTCGTTCTGCCAGCCGGTGGACTACCGGGAGACGTGCGAGACCACGCTGG 296
                      ***** * *** * ************  ******** * ***********     *****

consensus_6388#0      GGAAGGCCGCCGGCAATGGCGCCAGCTCGCCGACGGACCTGGCCAAGGCCATGTTCGCCG 349
consensus_6388#1      AGCAGACGGCGGGCAACGCGACGAAC---CCGACGGACCTCGCCAAGGCCATCTTCAAGG 353
                       * ** * ** ***** *   * * *   *********** *********** ***   *

consensus_6388#0      TGACGTCGGAGAAGATCTCCAAGGCCATCAGCGAGTCGTCGACGCTGGAGGAGCTCAAGA 409
consensus_6388#1      CGACGTCGGAGCGGATCGAGAAGGCGGTGAGGGAGTCCGCCGTGCTCAACGACCTCAAGA 413
                       **********  ****   *****  * ** *****  *   ***  * ** *******

consensus_6388#0      ACGACAAGCGCACGTCGGGCGCCCTGCAGAACTGCAAGGAGCTGCTGGAGTATGCCGTGG 469
consensus_6388#1      ACGACCCGCGCACGTCCGACGCGCTCAAGGACTGCGAGGAGCTGCTCGACTACGCCATCG 473
                      *****  ********* * *** **  ** ***** ********** ** ** *** * *

consensus_6388#0      ACGACCTCAAGACGTCGTTCGAGAAGCTCGGGGGGTTCGAGATGACCAACTTCCACAAGG 529
consensus_6388#1      ACGACCTCAAGACGACGTTCGACAAGCTCGGCGGGTTCCAGACGAGCAACTTCAAGCGCG 533
                      ************** ******* ******** ****** *** ** ******* *    *

consensus_6388#0      CCGTGGACGACCTCCGCACCTGGCTCAGCGCCGCCCTCACCTACCAGGGCACCTGCCTCG 589
consensus_6388#1      CCGTGGACGACGTCAAGACGTGGCTCAGCTCGGCGCTGACGTACCAGGAGACGTGCCTCG 593
                      *********** **   ** ********* * ** ** ** *******  ** *******

consensus_6388#0      ACGGCTTCCTCAACACCACC---ACCGACGCCGCCGACAAGATGAAAAGCGCCCTCAACA 646
consensus_6388#1      ACGGGTTCGAGAACTCTACGTCGACGGAGGCGTCGGAGAAGATGCGCAAGGCGCTCAAGA 653
                      **** ***   *** * **    ** ** **  * ** ******   *  ** ***** *

consensus_6388#0      GCTCGCAGGAGCTCACGGAGGACATCCTCGCCGTCGTCGACCAGTTCTCCGCCACGCTCG 706
consensus_6388#1      GCTCGCAGGAGCTGACGGAGAACTTCCTCGCCATCGTGGACCAGTTCGCCGACACGCTGG 713
                      ************* ****** ** ******** **** ********* *** ****** *

consensus_6388#0      GCAGCCTCAACATCGGCCG------CCGCCGCCTGCTCGCCGACGACGGCATGCCGGTGT 760
consensus_6388#1      CGAACCTGGACATCACCGGATTCAGCCGCCGGCTGCTCGGCGACGACGGCGTGCCCGTGT 773
                        * ***  *****  * *      ****** ******* ********** **** ****

consensus_6388#0      GGATGTCGGAGGGCGGGAGGCGGCAGCTGCTGGAGGCGGCGGGGCCCGAGGCCGGGCCCG 820
consensus_6388#1      GGATGTCCAA---CGCGAAGCGCCGGCTGCTGGAGGCGAC----CCCG-----GGCTCCA 821
                      *******  *   ** ** *** * ************* *    ****     **  ** 

consensus_6388#0      TGGAGTTCAAGCCGGACGTGACGGTGGCGGCGGACGGGAGCGGCGACGTGAAGACGATCG 880
consensus_6388#1      AGGAGTTCAAGCCGGACGTGACGGTGGCGGCGGACGGCAGCGGCGACTTCAAGACCATCA 881
                       ************************************ ********* * ***** *** 

consensus_6388#0      GCGAGGCGGTGGCGAAGGTGCCCCCGAAGAACAAGGAGCGGTACACCATCTACGTGAAGG 940
consensus_6388#1      ATGAGGCGCTGGCCAAGGTGCCGGTCAAGAGCACGGGGACGTACGTGATGTACGTGAAGG 941
                        ****** **** ********    **** ** ** *  ****   ** **********

consensus_6388#0      CCGGGACGTACAATGAGTACGTGTCGGTGGGGCGGCCGGCGACGAACGTGAACATGATAG 1000
consensus_6388#1      CCGGGACGTACAAGGAGTACGTGTCGGTGGCGCGCAACGTGACGAACCTGGTGATGATCG 1001
                      ************* **************** ***    * ******* **   ***** *

consensus_6388#0      GCGACGGCATCGGGAAGACCATCATCACGGGGAACAAGAACTTCAAGATGAACCTGACGA 1060
consensus_6388#1      GCGACGGCGCCACCAAGACCATCATCACGGGGAACAAGAGCTTCATGCTCAACATCACCA 1061
                      ********  *   ************************* ***** * * *** * ** *

consensus_6388#0      CCAAGGACACGGCGACGATGGAGGCGATCGGGAACGGCTTCTTCATGAGGGGGATCACGG 1120
consensus_6388#1      CCAAGGACACGGCCACCATGGAGGCGATCGGCAACGGGTTCTTCATGCGCGGCATCGGCG 1121
                      ************* ** ************** ***** ********* * ** ***   *

consensus_6388#0      TGGAGAACACGGCGGGGCCGGAGAACCACCAGGCGGTGGCTCTCCGCGCGCAGAGCGACA 1180
consensus_6388#1      TGGAGAACACGGCCGGGTCCAAGAACCACCAGGCGGTGGCGCTCCGCGTGCAGAGCGACC 1181
                      ************* *** *  ******************* ******* ********** 

consensus_6388#0      TGGCGGTGTTCTACCAGTGCGAGTTCGACGGGTACCAGGACACGCTGTACCCGCACGCGC 1240
consensus_6388#1      AGTCGGCGTTCTACGAGTGCCAGTTCGACGGGCACCAGGACACGCTCTACACCCACACCA 1241
                       * *** ******* ***** *********** ************* *** * *** *  

consensus_6388#0      AGCGCCAGTTCTTCCGCGACTGCACAGTGTCGGGGACAATCGACTTCATATTCGGGAACT 1300
consensus_6388#1      GCAGGCAGTACTACCGCGACTGCACCATCACCGGCACCATCGACTTCATCTTCGGCAACG 1301
                         * **** ** ************  *  * ** ** *********** ***** *** 

consensus_6388#0      CGCAGGTTGTTCTTCAGAACTGCTTGCTCCAGCCTCGTAAGCCGATGGACAACCAGGTGA 1360
consensus_6388#1      CGCAGGTGGTGCTCCAGAACTGCCGGATCCAGGTGCGCCGGTGCATGGACAACCAGCAGA 1361
                      ******* ** ** *********  * *****   **   *   ************  **

consensus_6388#0      ACATCATAACGGCGCAGGGGCGGCGGGAGAAGAGGTCGGCGGGAGGGACGGTGATCCACA 1420
consensus_6388#1      ACATCGTGACGGCGCAGGGGCGCAAGGAGAAGCACTCCGCGGGCGGCACGGTGATCCACA 1421
                      ***** * **************   *******   ** ***** ** *************

consensus_6388#0      ACTGCACGGTGGCGCCGCACCCGGACCTGGAGAAGTTCACGGACAAGGTGAAGACGTACC 1480
consensus_6388#1      ACTGCACCATCGAGCCGCACGAGGACTTCAAGGCCGACGCCGCCAAGTTCAAGACGTTCC 1481
                      *******  * * *******  **** *  **     * * * **** * ******* **

consensus_6388#0      TGGCGCGGCCGTGGAAGGAGTACTCGCGGACCATCTTCGTGCAGAACGAGATCGGGGCGG 1540
consensus_6388#1      TCGGCCGCCCGTGGAAGGAGTACTCGCGGACGCTCTACATCCAGTCCGACATCGGCGGGT 1541
                      * *  ** ***********************  *** * * ***  *** ***** * * 

consensus_6388#0      TGGTGGATCCGGTGGGGTGGCTGGAGTGGAACGGCAACTTCGCCCTGGACACCCTCTACT 1600
consensus_6388#1      TCATCGACCCGCAGGGGTGGCTGCCGTGGCTCGGCGACTTCGGCCTCAACACCTGCTACT 1601
                      *  * ** ***  **********  ****  **** ****** ***  *****  *****

consensus_6388#0      ACGCGGAGGTTGACAACCATGGCCCCGGCGCCGACATGAGCAAGCGCGCCAAGTGGAAGG 1660
consensus_6388#1      ACGCCGAGGTGGAGAACCGCGGCGACGGCGCCGACATGAGCAAGCGCGCCAAGTGGAGAG 1661
                      **** ***** ** ****  ***  ********************************  *

consensus_6388#0      GCGTCCAGTCCCTCACCTACCAGGACGTCCAGAAGGAGTTCACCGTGGAGGCCTTCATCC 1720
consensus_6388#1      GGGTCAAGACGGTCACGTACCAGCAGGCGCAGCAGAAGTACACCGTCGAGAGGTTCATCC 1721
                      * *** ** *  **** ****** * *  *** ** *** ****** ***   *******

consensus_6388#0      AGGGCCAGGAGTTCATCCCCAAGTTCGGCGTCCCTTACATCCCCGGCCTTCTCCCCCAGA 1780
consensus_6388#1      AGGGACAGACGTGGCTCCCAAAGTTCGGCGTGCCGTTCATCCCCGGCCTGTTGCCGCAGG 1781
                      **** ***  **   **** *********** ** * ************  * ** *** 

consensus_6388#0      CGCAGCAGGGCAGGATGCACTAATTTTTCACTCCTGTACTATAACCATCATCGCCCCAGC 1840
consensus_6388#1      AGCAGTCAGGGAGGATACACTGATCCATCG----TGCGTCGTCTCGTCGGCCTATATATA 1837
                       ****   ** ***** **** **   **     **     *  *      *     *  

consensus_6388#0      CCCCAGCCCGGACCTACGTACTACACACTATATATGGATCTTCGATCTCTCACTCACCTG 1900
consensus_6388#1      TGCTAGCGGGTAATTGTTTGCATCATGTTGC-TGTCG-TCGTCAACTCCTGTGATCTCTA 1895
                        * ***  * *  *   * *  **   *   * * * ** ** *   **       ** 

consensus_6388#0      CATCAATTGCCGGCCCCCATTATTTATTTTCATATACATATACTTGTTGTTATATATATA 1960
consensus_6388#1      TAGCGTTCTCTG-----CTGTACTCTAATCCATAGAAATGCATTCTTTTCTCCATAGA-A 1949
                       * *  *  * *     *  ** *    * **** * **  * *  **  *  *** * *

consensus_6388#0      TATGCATCTCACACATTCCAACTGCAGTCGCCGCGGTTGATTAACTAAATTAGTAGCTCG 2020
consensus_6388#1      TTTGCGTA-CGCGTAGTACA-TTGCATATACTAGTACTACTTAATTATATTTACGTGTTG 2007
                      * *** *  * *  * * **  ****    *      *  **** ** ***      * *

consensus_6388#0      ATCATGGAACATGCATATGCATGGATCTCGATTGTTTTGGGACTGGATCCAAAATGTATA 2080
consensus_6388#1      --TACGGGTTGT---TACGAATCGATT---ATTGTTTTT--ACTG-ATCGACAAATGGTG 2056
                         * **    *   ** * ** ***    ********   **** *** * **    * 

consensus_6388#0      TAATGTATATTCAATCTCTT---- 2100
consensus_6388#1      AAACTAATAGATAAGGTTTGACAG 2080
                       **   ***   **  * *     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)