cluster # 64

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Oryza sativa
cluster # 64 cluster # 64 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_64#0 length = 518 sequences # 2

consensusID : consensus_64#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 518
fasta sequence

                              [CCTCTCCTGCTCTAGATCACTTTTTCCGTCCGCACAAATCGCCTACTCCTACTCCACATGAGCCCCACCGCCGTTCATCAGAGATTCGGAGTCAATTTCCACCGCCGTTGGAAACCACGTACGCCGCGAAGTCCGCCACTGTTGCCAAATCAAAGCCCACGCACCTCATATATCATGTTCCTCTCATGCTGAACCATCAGATCGATGGTTGCTGCGCGCTAGATCGATGTTGTCCTTATGAAGAAGAAGAAGCCGTTGTTGCCATGCCATATCTCATGCCGCCTTGTGGCTGTTCTGTTGATTGAGCAAACAAGCAGCTAGAAGAAGTGGTTCTGAGTTCTGTTGTGTCAGTGGATTTGGGGATCTTTTTTTCTGTTTCTTTTTACATCTTCTCTCGATATATAACTGTTGGTTTATTTA-ACAAAGTAGATGATTTTTTTAGGAGCGATGCAATTGTGATAAGATTTGGATCTTTCCATCAACACTTCACTAGCAGTAATTATCTANNAAAAANNAAA]

[+] EMBL OS0709A              [CCTCTCCTGCTCTAGATCACTTTTTCCGTCCGCACAAATCGCCTACTCCTACTCCACATGAGCCCCACCGCCGTTCATCAGAGATTCGGAGTCAATTTCCACCGCCGTTGGAAACCACGTACGCCGCGAAGTCCGCCACTGTTGCCAAATCAAAGCCCACGCACCTCATATATCATGTTCCTCTCATGCTGAACCATCAGATCGATGGTTGCTGCGCGCTAGATCGATGTTGTCCTTATGAAGAAGAAGAAGCCGTTGTTGCCATGCCATATCTCATGCCGCCTTGTGGCTGTTCTGTTGATTGAGCAAACAAGCAGCTAGAAGAAGTGGTTCTGAGTTCTGTTGTGTCAGTGGATTTGGGGATCTTTTTTTCTGTTTCTTTTTACATCTTCTCTCGATATATAACTGTTGGTTTATTTA ACAAAGTAGA                                                                                        ]
[+] EMBL C98104               [tCTC CCTGCTCTAGATCACTTTTTCCGTCCGCACAAATCGCCTACTCCTACTCCACATGAGCCCCACCGCCGTTCATCAGAGATTCGGAGTCAATTTCCACCGCCGTTGGAAACCACGTACGCCGCGAAGTCCGCCACTGTTGCCAAATCAAAGCCCACGCACCTCATATATCATGTTCCTCTCATGCTGAACCATCAGATCGATGGTT NTGCGCGCTAGATCGATGTTGTCCTTATGAAGAAGAAGAAGCCGTTGTTGCCATGCCATATCTCATGCCGCCTTGTGGCTGTTCTGTTGATTGAGCAAACAAGCAGCTAGAAGAAGTGGTTCTGAGTTCTGTTGTGTCAGTGGATTTGGGGATCTTTTTTTCTGTTTCTTTTTACATCTTCTCTCGATATATACCTGTT GTTTATTTACACAAAGTAGATGATTTTTTTAGGAGCGATGCAATTGTGATAAGATTTGGATCTTTCCATCAACACTTCACTAGCAGTAATTATCTANNAAAAANNAAA]




>consensus_64#0
CCTCTCCTGCTCTAGATCACTTTTTCCGTCCGCACAAATCGCCTACTCCTACTCCACATG
AGCCCCACCGCCGTTCATCAGAGATTCGGAGTCAATTTCCACCGCCGTTGGAAACCACGT
ACGCCGCGAAGTCCGCCACTGTTGCCAAATCAAAGCCCACGCACCTCATATATCATGTTC
CTCTCATGCTGAACCATCAGATCGATGGTTGCTGCGCGCTAGATCGATGTTGTCCTTATG
AAGAAGAAGAAGCCGTTGTTGCCATGCCATATCTCATGCCGCCTTGTGGCTGTTCTGTTG
ATTGAGCAAACAAGCAGCTAGAAGAAGTGGTTCTGAGTTCTGTTGTGTCAGTGGATTTGG
GGATCTTTTTTTCTGTTTCTTTTTACATCTTCTCTCGATATATAACTGTTGGTTTATTTA
ACAAAGTAGATGATTTTTTTAGGAGCGATGCAATTGTGATAAGATTTGGATCTTTCCATC
AACACTTCACTAGCAGTAATTATCTANNAAAAANNAAA

clustalw multiple alignements is not computed in this case