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Oryza sativa
cluster # 6403 cluster # 6403       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6403#0 length = 1885 sequences # 4  

consensusID : consensus_6403#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1885
fasta sequence
                              [ATCGCGTGTATACTTACCAATTACCGTACCCGCGGCCGGTACCGCTCGTCCTCGGCCGCGACCGCGCGCCATGGCGCGTGCGCGTGCGTCTGCCATGGGCGCCGCTCCTCCTCCGCACCTGCGTAGCCATGACCTCGTTGTCGTCGTCGCCGTCGCCGCGGCGGCGCTATGTCTCGCGTGCCGAGGTGCGTCGGCGGGCGGCGGCGGCGGCGTCGACGTGCTCGATCGGGCGAGGCGGCCGGAGTTCGCGGCGTGGATGGCGGGCGTCAGGTGGGCCATCCACGAGCGGCCAGAGCTGGCGTTCGAGGAGATCGAGACCAGCAGGCTGGTGAGGGCGGAGCTCGACGCCATGGGCGTCGCGTACAGGCACCCGGTCGCCGGCACGGGCGTCGTCGCGACCGTAGGCACCGGGCGCCCGCCGTTCGTCGCGCTGCGCGCCGACATGGATGCACTCCCGATGCAGGAGGAGGTGCAGTGGGAGCACAAGAGTAAGGTGGCCATGAAGATGCACGCCTGCGGCCACGACGCACACACCACCATGCTCCTCGGCGCCGCCAGGATCCTCCAGGAGCGACGCCATGAGCTGCAGGGTACGGTGGTCCTCCTCTTCCAGCCGGGGGAGGAGGTGGGCACCGGGGCCAGGAGGATGGTGGAAGCCGGCGCCGTGGACAACGTGGAGGCCATCTTCGGGTTCCACGTCAGCGTGGAGCTCCCCACCGGCGTGGT-GGGATCACGGCCCGGCCCGC-TGCTCGCCGGCTGCGGCTTCTTCGAGGCGGTGATCACCGGGAAGGGCGGCCACGCCGCACACCCCCACGCCAGCGTCGACCCCATCTTGGCCGCTTCCACCGTCGTCCTCGCCCTGCAGGGCCTCGTCTCGCGGGAGGCCGACCCGCTGGAGGCCCAGGTGGTGACGGTGACGAGGTTCCTCGCCGGCGACGCGCTCAACGTGATCCCGGAGTCGATCACGATCGGCGGCACGTTCCGGGTGTTCTCGAACGAGGGCTTCTTGCGGCTGAAGCGGTGGATCGAGGAGGTGATCGTGGCGCAGTCGGCGGTGTACCGGTGCGCCGCGGCGGTGGACTTCCACGCGGGGGGCAGGCCGCTGCTGCCCCCGACCATCAACAGCGCGGCGCTGCACGCGCACTTCCAGGCCGTCGCGGCGGAGACGCTCGGCGCCTCGGCCGCGGTCCTCGGCGCGATGGAGCCGTGCATGGGGAGCGAGGACTTCGCCGTCTTCTCCGAGGCCGTGCCGGCGTCCCACTTCTACTTCGTCGGGGTGCGCAACGAGGCGGAGGGGCTGGTGCACCTCGCGCACTCGCCGCACTTCCGCGTCGACGACGCCGCGCTCCCGTACGGCGCGGCGTTGCACGCCAGCCTCGCCATGAGGTACCTGGACGAACGCCGGCGCGAGGGCGGCTCGCACCCTCACGAGGAACTCTAGTTTCGTCCAGTCGCTGCATCTGCCTTGCATCCGACTTGGCGACGTCGAGTCGCCACGGCGCCGGCGGCGTCTCTGTTCAGCCCACGCGCACGGCGGTTCGCGGAGCTCAAGATGGTCGAGGTTAGGTATCCGCGGCGGATTTTGTCATCGACGATTACACTGTAAGGAATTCTGGGCTCGACCTTGGCATTCTGACGAAAACCTAGGTAGGAATGTAGAATGGGCGATTGCATGTTCGATGCGGCGCCAGCGGCCCAGCGCGGTGCAAATTGTAAAGCTGATAAGCTGCACGCACGCAGAAATTATCTGAGAAGAAGAGTTCAGGCGATCAGTGAACCAAATGTTTACAAATTGACGGTCTTGCACCCAGTGACAACAGCCAAAAGAAAACAAAATTGGAAATGAAACAGAACTGGAGAAACACACGATAGTTACAGCGAAAAA]

[+] EMBL AK105646             [ATCGCGTGTATACTTACCAATTACCGTACCCGCGGCCGGTACCGCTCGTCCTCGGCCGCGACCGCGCGCCATGGCGCGTGCGCGTGCGTCTGCCATGGGCGCCGCTCCTCCTCCGCACCTGCGTAGCCATGACCTCGTTGTCGTCGTCGCCGTCGCCGCGGCGGCGCTATGTCTCGCGTGCCGAGGTGCGTCGGCGGGCGGCGGCGGCGGCGTCGACGTGCTCGATCGGGCGAGGCGGCCGGAGTTCGCGGCGTGGATGGCGGGCGTCAGGTGGGCCATCCACGAGCGGCCAGAGCTGGCGTTCGAGGAGATCGAGACCAGCAGGCTGGTGAGGGCGGAGCTCGACGCCATGGGCGTCGCGTACAGGCACCCGGTCGCCGGCACGGGCGTCGTCGCGACCGTAGGCACCGGGCGCCCGCCGTTCGTCGCGCTGCGCGCCGACATGGATGCACTCCCGATGCAGGAGGAGGTGCAGTGGGAGCACAAGAGTAAGGTGGCCATGAAGATGCACGCCTGCGGCCACGACGCACACACCACCATGCTCCTCGGCGCCGCCAGGATCCTCCAGGAGCGACGCCATGAGCTGCAGGGTACGGTGGTCCTCCTCTTCCAGCCGGGGGAGGAGGTGGGCACCGGGGCCAGGAGGATGGTGGAAGCCGGCGCCGTGGACAACGTGGAGGCCATCTTCGGGTTCCACGTCAGCGTGGAGCTCCCCACCGGCGTGGT GGGATCACGGCCCGGCCCGC TGCTCGCCGGCTGCGGCTTCTTCGAGGCGGTGATCACCGGGAAGGGCGGCCACGCCGCACACCCCCACGCCAGCGTCGACCCCATCTTGGCCGCTTCCACCGTCGTCCTCGCCCTGCAGGGCCTCGTCTCGCGGGAGGCCGACCCGCTGGAGGCCCAGGTGGTGACGGTGACGAGGTTCCTCGCCGGCGACGCGCTCAACGTGATCCCGGAGTCGATCACGATCGGCGGCACGTTCCGGGTGTTCTCGAACGAGGGCTTCTTGCGGCTGAAGCGGTGGATCGAGGAGGTGATCGTGGCGCAGTCGGCGGTGTACCGGTGCGCCGCGGCGGTGGACTTCCACGCGGGGGGCAGGCCGCTGCTGCCCCCGACCATCAACAGCGCGGCGCTGCACGCGCACTTCCAGGCCGTCGCGGCGGAGACGCTCGGCGCCTCGGCCGCGGTCCTCGGCGCGATGGAGCCGTGCATGGGGAGCGAGGACTTCGCCGTCTTCTCCGAGGCCGTGCCGGCGTCCCACTTCTACTTCGTCGGGGTGCGCAACGAGGCGGAGGGGCTGGTGCACCTCGCGCACTCGCCGCACTTCCGCGTCGACGACGCCGCGCTCCCGTACGGCGCGGCGTTGCACGCCAGCCTCGCCATGAGGTACCTGGACGAACGCCGGCGCGAGGGCGGCTCGCACCCTCACGAGGAACTCTAGTTTCGTCCAGTCGCTGCATCTGCCTTGCATCCGACTTGGCGACGTCGAGTCGCCACGGCGCCGGCGGCGTCTCTGTTCAGCCCACGCGCACGGCGGTTCGCGGAGCTCAAGATGGTCGAGGTTAGGTATCCGCGGCGGATTTTGTCATCGACGATTACACTGTAAGGAATTCTGGGCTCGACCTTGGCATTCTGACGAAAACCTAGGTAGGAATGTAGAATGGGCGATTGCATGTTCGATGCGGCGCCAGCGGCCCAGCGCGGTGCAAATTGTAAAGCTGATAAGCTGCACGCACGCAGAAATTATCTGAGAAGAAG                                                                                                                               ]
[+] EMBL C72636               [                            CCCGCGGCCGGTACCGCTCGTCCTCGGTCGCGACCGCGCGCCATGGCNNTNACGCGTGCGTCTGCCATGGGCGCCGCTCCTCCTCCGCACCTGCGTA NCATGACCTCGTTGTNGTNGTNGCCGTCGCCGCGGCGGCGCTATGTCTCGCGTGCCGAGGTGCGTCGGCGGGCGGCGGCGGCGGCGTCGACGTGCTCGATCGGGCGAGGCGGCCGGAGTTCGCGGNGTGGATGGCGGGCGTCAGGTGGGCCATCCACGAGCGGCCAGAGCTGGCGTTCGAGGAGATCGAGACCAGCAGGCTGGTGAGGGCGGA CTCGACGCCATGGGCGTNCTGTACAGGCACCCGGTCGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL C98815               [                                                                                                                                                                                                                                                                                                                                                                                                                                   CGTTCGTCGCGCTGCGC CCGACATGGATGCACTCCCGATGCAGGAGGAGGTGCAGTGGGAGCACAAGAGTAAGGTGGCCATGAAGATGCACGCCTGCGGCCACGACGCACACACCACCATGCTCCTCGGCGCCGCCAGGATCCTCCAGGAGCGACGCCATGAGCTGCAGGGTACGGTGGTCCTCCTCTTCCAGCCGGGGGAGGAGGTGGGCANCGGGGCCAGGAGGATGGTGGAAGCCGGCGCCGTGGACAACGTGGAGGCCATCTTCGGGTTCCACGTCAGCGTGGAGCTCCCCACCGGCGTGGTGGGGATCGCGGCCCGGCCCGCTTGCTCGCCGGCTGCGGCTTCTTCGAAGCGGTGATCACCGGGAAAGGCGG CAAG CGCACAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL C98816               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              tnCTTCCTCT CCTTGCA CCGACTT GCGACGTCGAATCNCCACGGC CCGGCGGCGT TNTGTTCAGCCCACGCGCACGGCGGTTNGCGGAGCTCAAGATGGTCGAGGTTNGTTATCCGCGGCGGATTTTGTCATCGACGATTACACTGTAAGGAATTCTGGGCTCGACCTTGGCATTCTGACGAAAACCTAGGTAGGAATGTAGAATGGGCGATTGCATGTTCGATGCGGCGCCAGCGGCCCAGCGCGGTGCAAATTGTAAAGCTGATAAGCTGCACGCACGCAGAAATTATCTGAGAAGAAGAGTTCAGGCGATCAGTGAACCAAATGTTTACAAATTGACGGTCTTGCACCCAGTGACAACAGCCAAAAGAAAACAAAATTGGAAATGAAACAGAACTGGAGAAACACACGATAGTTACAGCGAAAAA]


>consensus_6403#0 ATCGCGTGTATACTTACCAATTACCGTACCCGCGGCCGGTACCGCTCGTCCTCGGCCGCG ACCGCGCGCCATGGCGCGTGCGCGTGCGTCTGCCATGGGCGCCGCTCCTCCTCCGCACCT GCGTAGCCATGACCTCGTTGTCGTCGTCGCCGTCGCCGCGGCGGCGCTATGTCTCGCGTG CCGAGGTGCGTCGGCGGGCGGCGGCGGCGGCGTCGACGTGCTCGATCGGGCGAGGCGGCC GGAGTTCGCGGCGTGGATGGCGGGCGTCAGGTGGGCCATCCACGAGCGGCCAGAGCTGGC GTTCGAGGAGATCGAGACCAGCAGGCTGGTGAGGGCGGAGCTCGACGCCATGGGCGTCGC GTACAGGCACCCGGTCGCCGGCACGGGCGTCGTCGCGACCGTAGGCACCGGGCGCCCGCC GTTCGTCGCGCTGCGCGCCGACATGGATGCACTCCCGATGCAGGAGGAGGTGCAGTGGGA GCACAAGAGTAAGGTGGCCATGAAGATGCACGCCTGCGGCCACGACGCACACACCACCAT GCTCCTCGGCGCCGCCAGGATCCTCCAGGAGCGACGCCATGAGCTGCAGGGTACGGTGGT CCTCCTCTTCCAGCCGGGGGAGGAGGTGGGCACCGGGGCCAGGAGGATGGTGGAAGCCGG CGCCGTGGACAACGTGGAGGCCATCTTCGGGTTCCACGTCAGCGTGGAGCTCCCCACCGG CGTGGTGGGATCACGGCCCGGCCCGCTGCTCGCCGGCTGCGGCTTCTTCGAGGCGGTGAT CACCGGGAAGGGCGGCCACGCCGCACACCCCCACGCCAGCGTCGACCCCATCTTGGCCGC TTCCACCGTCGTCCTCGCCCTGCAGGGCCTCGTCTCGCGGGAGGCCGACCCGCTGGAGGC CCAGGTGGTGACGGTGACGAGGTTCCTCGCCGGCGACGCGCTCAACGTGATCCCGGAGTC GATCACGATCGGCGGCACGTTCCGGGTGTTCTCGAACGAGGGCTTCTTGCGGCTGAAGCG GTGGATCGAGGAGGTGATCGTGGCGCAGTCGGCGGTGTACCGGTGCGCCGCGGCGGTGGA CTTCCACGCGGGGGGCAGGCCGCTGCTGCCCCCGACCATCAACAGCGCGGCGCTGCACGC GCACTTCCAGGCCGTCGCGGCGGAGACGCTCGGCGCCTCGGCCGCGGTCCTCGGCGCGAT GGAGCCGTGCATGGGGAGCGAGGACTTCGCCGTCTTCTCCGAGGCCGTGCCGGCGTCCCA CTTCTACTTCGTCGGGGTGCGCAACGAGGCGGAGGGGCTGGTGCACCTCGCGCACTCGCC GCACTTCCGCGTCGACGACGCCGCGCTCCCGTACGGCGCGGCGTTGCACGCCAGCCTCGC CATGAGGTACCTGGACGAACGCCGGCGCGAGGGCGGCTCGCACCCTCACGAGGAACTCTA GTTTCGTCCAGTCGCTGCATCTGCCTTGCATCCGACTTGGCGACGTCGAGTCGCCACGGC GCCGGCGGCGTCTCTGTTCAGCCCACGCGCACGGCGGTTCGCGGAGCTCAAGATGGTCGA GGTTAGGTATCCGCGGCGGATTTTGTCATCGACGATTACACTGTAAGGAATTCTGGGCTC GACCTTGGCATTCTGACGAAAACCTAGGTAGGAATGTAGAATGGGCGATTGCATGTTCGA TGCGGCGCCAGCGGCCCAGCGCGGTGCAAATTGTAAAGCTGATAAGCTGCACGCACGCAG AAATTATCTGAGAAGAAGAGTTCAGGCGATCAGTGAACCAAATGTTTACAAATTGACGGT CTTGCACCCAGTGACAACAGCCAAAAGAAAACAAAATTGGAAATGAAACAGAACTGGAGA AACACACGATAGTTACAGCGAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)