cluster # 6408

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Oryza sativa
cluster # 6408 cluster # 6408 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6408#0 length = 1908 sequences # 4
consensusID : consensus_6408#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1908
fasta sequence
                              [GCCACCCGATCCGGCAACAACAACGTACGTAACCTCCTCTCTCTCTCTCTCTCTCTCTCCCCTTCCAGCCGCGCGCGCGCACGCACGCCGCCGTCGTGACGTCGCCGTCGCGGTCGCCGCCATGGATCCGACGCCGCAGTCGCACCCGATCCTGGCGTACGTGCTGTCGCGGCTCCCGTCGCTGCTGCCGGTGTCGCCGTCGCTGTCCACCCCGCGCGCGCGG-GACATCGAGCAGCCGTCCCCGCGGGCGCCGTCGGGCG-CGCG-GAG-TTCGACCTCGTCAGCCGCATGCCGGGGCTCCGCCACCCGTCCGTCCTCTCCGCCATGACGCGCGCCGTCGCCGACGTCTCCTCGGCGCGCGACGCGCTCCGCCTCCTCGGCCCCCGCCCCGACCACGAGCTCGTCGACTCCGCCCGCGCCTTCCTCCGCTCCCACGCCGCCGAAGAGGCCGAAGAGGAGGAGGAGGACGAGAAGGTGGCGAAGAGCCGGGAGGTGGTGCGGCTGGACGAGGCGCACGAGTCGTACGGTGGCTTGCTGCGGGAGGCGGAGGAGAGGCTGGATCGCGTGTACCGGACGGCGATGAGAGGGAGGGACATGCAGGTGGTGGCCGCGGCGCACGGCGGTGGCGGGGAGGAGGAGGCCGGGGTGGTGGACGACGAGGTGGTGCGGGTGCTCCGGGACGCGGAGGAAGGGAAGGCGGTGGAGCGCCTCCTCCTCGCCGACCGGCAGCTCCGCCACCTGCCCGAGCAGCTCGGCCGGATCCGCGGCCTCCTCGTCCTCGACGTCTCGCGAAATCAGCTCAAGAATGTCCCAGATGCCATAGGCGGGCTCGAACACCTGGAAGAGCTTCGCCTCGCTTCCAACGCGTTGGTCTCCCTCCCGGACTCCATAGGCCTCCTCACCAGCCTCAAGATCCTCGACGTCTCGGGCAACAAGCTGAGGTCTCTCCCCGACAGCATCTCAAAATGCAGGTCGCTGGTGGAGCTGGACGTGAGCTACAACGTGCTGTCGTACCTCCCGACGGGGATCGGGCAGGAGATGGCGAGGCTGGAGAAGCTGTGGGTGCACCTGAACAAGCTGCGGTCGCTGCCGTCGTCGGTGTGCGAGATGCGGTCGCTGCGCCTCCTGGACGCGCACTTCAACCAGCTCCGGGGGCTCCCCGCGGGGATCGGGAGGCTGGCGGCGCTGGAGTCGCTCAACCTCAGCAGCAACTTCAGCGACATGCGCGACCTCCCGGCGTCGTTCGGGGACCTGCTCGGCCTGCGCGAGCTCGACCTCAGCAACAACCAGATACACGCGCTCCCGGACTGCTTCGGCCGCCTCCAGCGCCTCGAGCGGCTCCGCCTCGACCAGAACCCGCTCGCCGTGCCCCCCAAGGAGGTGGTGGCCGGCGGCGTCGGCGCCGTCAAGGAGTACATGGCCAGGCGGTGGCGCGACGCCCGCGCCGAGGAGGAGCGCCGGGGCAGCGCCGTCGCCGAGAGCCCCAGGGTGTCGACGCCCAAGGAGT-GGCTGGTG-CGCAGCGTCTCGTCGCTGGG-CAGCTGGGTGT-CCG-ACGT-CACG-AGGTACGGCGCCGGCCAGGACAAGGCAGCGGCGGAGGAGGAGGAGGACGCCTACCTCCAGCAGAATCTGTGATCGGAGATTACAGCATTTGCTTGCTCCGGTGCTTTCATCCGTATGTACAGAAGAACTACTGCAGACCGTCGCCGCGTCGTTCGTTTCGCATCAGCCGTGTGTTTGTGTGTGTTTACCTTCGCTGATTCCTTACCATTTACCATTTTTGTTGTTGTTGTTTTAACCGTTTTGCTGTTTAAAACTTTTAAACCCAGGTTACTGGACCACAGTGCCTGTGTGTTTGTTATATTTACCTTGCTGATTCCTAACATTTTTTTGGAGGTTTTCGTTTAAAAAAAAAAA]

[+] EMBL AK069976             [GCCACCCGATCCGGCAACAACAACGTACGTAACCTCCTCTCTCTCTCTCTCTCTCTCTCCCCTTCCAGCCGCGCGCGCGCACGCACGCCGCCGTCGTGACGTCGCCGTCGCGGTCGCCGCCATGGATCCGACGCCGCAGTCGCACCCGATCCTGGCGTACGTGCTGTCGCGGCTCCCGTCGCTGCTGCCGGTGTCGCCGTCGCTGTCCACCCCGCGCGCGCGG GACATCGAGCAGCCGTCCCCGCGGGCGCCGTCGGGCGCCGCG GAG TTCGACCTCGTCAGCCGCATGCCGGGGCTCCGCCACCCGTCCGTCCTCTCCGCCATGACGCGCGCCGTCGCCGACGTCTCCTCGGCGCGCGACGCGCTCCGCCTCCTCGGCCCCCGCCCCGACCACGAGCTCGTCGACTCCGCCCGCGCCTTCCTCCGCTCCCACGCCGCCGAAGAGGCCGAAGAGGAGGAGGAGGACGAGAAGGTGGCGAAGAGCCGGGAGGTGGTGCGGCTGGACGAGGCGCACGAGTCGTACGGTGGCTTGCTGCGGGAGGCGGAGGAGAGGCTGGATCGCGTGTACCGGACGGCGATGAGAGGGAGGGACATGCAGGTGGTGGCCGCGGCGCACGGCGGTGGCGGGGAGGAGGAGGCCGGGGTGGTGGACGACGAGGTGGTGCGGGTGCTCCGGGACGCGGAGGAAGGGAAGGCGGTGGAGCGCCTCCTCCTCGCCGACCGGCAGCTCCGCCACCTGCCCGAGCAGCTCGGCCGGATCCGCGGCCTCCTCGTCCTCGACGTCTCGCGAAATCAGCTCAAGAATGTCCCAGATGCCATAGGCGGGCTCGAACACCTGGAAGAGCTTCGCCTCGCTTCCAACGCGTTGGTCTCCCTCCCGGACTCCATAGGCCTCCTCACCAGCCTCAAGATCCTCGACGTCTCGGGCAACAAGCTGAGGTCTCTCCCCGACAGCATCTCAAAATGCAGGTCGCTGGTGGAGCTGGACGTGAGCTACAACGTGCTGTCGTACCTCCCGACGGGGATCGGGCAGGAGATGGCGAGGCTGGAGAAGCTGTGGGTGCACCTGAACAAGCTGCGGTCGCTGCCGTCGTCGGTGTGCGAGATGCGGTCGCTGCGCCTCCTGGACGCGCACTTCAACCAGCTCCGGGGGCTCCCCGCGGGGATCGGGAGGCTGGCGGCGCTGGAGTCGCTCAACCTCAGCAGCAACTTCAGCGACATGCGCGACCTCCCGGCGTCGTTCGGGGACCTGCTCGGCCTGCGCGAGCTCGACCTCAGCAACAACCAGATACACGCGCTCCCGGACTGCTTCGGCCGCCTCCAGCGCCTCGAGCGGCTCCGCCTCGACCAGAACCCGCTCGCCGTGCCCCCCAAGGAGGTGGTGGCCGGCGGCGTCGGCGCCGTCAAGGAGTACATGGCCAGGCGGTGGCGCGACGCCCGCGCCGAGGAGGAGCGCCGGGGCAGCGCCGTCGCCGAGAGCCCCAGGGTGTCGACGCCCAAGGAGT GGCTGGTG CGCAGCGTCTCGTCGCTGGG CAGCTGGGTGT CCG ACGT CACG AGGTACGGCGCCGGCCAGGACAAGGCAGCGGCGGAGGAGGAGGAGGACGCCTACCTCCAGCAGAATCTGTGATCGGAGATTACAGCATTTGCTTGCTCCGGTGCTTTCATCCGTATGTACAGAAGAACTACTGCAGACCGTCGCCGCGTCGTTCGTTTCGCATCAGCCGTGTGTTTGTGTGTGTTTACCTTCGCTGATTCCTTACCATTTACCATTTTTGTTGTTGTTGTTTTAACCGTTTTGCTGTTTAAAACTTTTAAACCCAGGTTACTGGACCACAGTGCCTG                                                                   ]
[+] EMBL C72072               [             GCAACAACAACGTACGTAACCTCCTCTNTNTNTCTCTCTCTCTCTCCCCTTCCAGCCGCGCGCGCGCACGCACGCCGCCGTCGTNACGTCGCCGTCGCGGTCGCCGCCATGGNTCCAACGCCGCAGTCGCACCCAATCCTGGCGTACGTNCTGTCGCGGCTCCCGTCGCTGCTGCCGGTNTCGCCGTCGCTGTCCACCCCGCGCGCGCGGAAACATCGAGCAGCCGTCCCCGCGGGCGCCGTCGGGCG CGCGAAAGTTTCGACCTCGTAAGCCGCATGCNGGGGCTCCGnacc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C98902               [                                                                                 CGCACGCCGCCGTCGTGACGTCGCCGTCGCGGTCGCCGCCATGGATCCGACGCCGCAGTCGCACCCGATCCTGGCGTACGTGCTGTCGCGGCTCCCGTCGCTGCTGCCGGTGTCGCCGTCGCTGTCCACCCCGCGCGCGC G GACATCGAGCAGCCGTCCCNGCGGGCGCCGTCGGGCG CGCG GAG TTCGACCTCGTCAGCCGCATGCCGGGGCTCCGCCACCCGTCCGTCCTCTCCGCCATGANGCGCGCCGTCGCCGACGTCTCCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C98903               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCA GGTTTCGACGCCCAA GANTGGGCTGGTGCCGCAGCGTCTCGTCGCTGGGCCAGCTGGGTGTCCCGAACGTCCACGAAGGTACGGCGCCGGCCAGGACAAGGCAGCGGCGGAGGAGGAGGAGGACGCCTACCTCCAGCAGAATCTGTGATCGGAGATTACAGCATTTGCTTGCTCCGGTGCTTTCATCCGTATGTACAGAAGAACTACTGCAGACCGTCGCCGCGTCGTTCGTTTCGCATCAGCCGTGTGTTTGTGTGTGTTTACCTTCGCTGATTCCTTACCATTTACCATTTTTGTTGTTGTTGTTTTAACCGTTTTGCTGTTTAAAACTTTTAAACCCAGGTTACTGGACCACAGTGCCTGTGTGTTTGTTATATTTACCTTGCTGATTCCTAACATTTTTTTGGAGGTTTTCGTTTAAAAAAAAAAA]




>consensus_6408#0
GCCACCCGATCCGGCAACAACAACGTACGTAACCTCCTCTCTCTCTCTCTCTCTCTCTCC
CCTTCCAGCCGCGCGCGCGCACGCACGCCGCCGTCGTGACGTCGCCGTCGCGGTCGCCGC
CATGGATCCGACGCCGCAGTCGCACCCGATCCTGGCGTACGTGCTGTCGCGGCTCCCGTC
GCTGCTGCCGGTGTCGCCGTCGCTGTCCACCCCGCGCGCGCGGGACATCGAGCAGCCGTC
CCCGCGGGCGCCGTCGGGCGCGCGGAGTTCGACCTCGTCAGCCGCATGCCGGGGCTCCGC
CACCCGTCCGTCCTCTCCGCCATGACGCGCGCCGTCGCCGACGTCTCCTCGGCGCGCGAC
GCGCTCCGCCTCCTCGGCCCCCGCCCCGACCACGAGCTCGTCGACTCCGCCCGCGCCTTC
CTCCGCTCCCACGCCGCCGAAGAGGCCGAAGAGGAGGAGGAGGACGAGAAGGTGGCGAAG
AGCCGGGAGGTGGTGCGGCTGGACGAGGCGCACGAGTCGTACGGTGGCTTGCTGCGGGAG
GCGGAGGAGAGGCTGGATCGCGTGTACCGGACGGCGATGAGAGGGAGGGACATGCAGGTG
GTGGCCGCGGCGCACGGCGGTGGCGGGGAGGAGGAGGCCGGGGTGGTGGACGACGAGGTG
GTGCGGGTGCTCCGGGACGCGGAGGAAGGGAAGGCGGTGGAGCGCCTCCTCCTCGCCGAC
CGGCAGCTCCGCCACCTGCCCGAGCAGCTCGGCCGGATCCGCGGCCTCCTCGTCCTCGAC
GTCTCGCGAAATCAGCTCAAGAATGTCCCAGATGCCATAGGCGGGCTCGAACACCTGGAA
GAGCTTCGCCTCGCTTCCAACGCGTTGGTCTCCCTCCCGGACTCCATAGGCCTCCTCACC
AGCCTCAAGATCCTCGACGTCTCGGGCAACAAGCTGAGGTCTCTCCCCGACAGCATCTCA
AAATGCAGGTCGCTGGTGGAGCTGGACGTGAGCTACAACGTGCTGTCGTACCTCCCGACG
GGGATCGGGCAGGAGATGGCGAGGCTGGAGAAGCTGTGGGTGCACCTGAACAAGCTGCGG
TCGCTGCCGTCGTCGGTGTGCGAGATGCGGTCGCTGCGCCTCCTGGACGCGCACTTCAAC
CAGCTCCGGGGGCTCCCCGCGGGGATCGGGAGGCTGGCGGCGCTGGAGTCGCTCAACCTC
AGCAGCAACTTCAGCGACATGCGCGACCTCCCGGCGTCGTTCGGGGACCTGCTCGGCCTG
CGCGAGCTCGACCTCAGCAACAACCAGATACACGCGCTCCCGGACTGCTTCGGCCGCCTC
CAGCGCCTCGAGCGGCTCCGCCTCGACCAGAACCCGCTCGCCGTGCCCCCCAAGGAGGTG
GTGGCCGGCGGCGTCGGCGCCGTCAAGGAGTACATGGCCAGGCGGTGGCGCGACGCCCGC
GCCGAGGAGGAGCGCCGGGGCAGCGCCGTCGCCGAGAGCCCCAGGGTGTCGACGCCCAAG
GAGTGGCTGGTGCGCAGCGTCTCGTCGCTGGGCAGCTGGGTGTCCGACGTCACGAGGTAC
GGCGCCGGCCAGGACAAGGCAGCGGCGGAGGAGGAGGAGGACGCCTACCTCCAGCAGAAT
CTGTGATCGGAGATTACAGCATTTGCTTGCTCCGGTGCTTTCATCCGTATGTACAGAAGA
ACTACTGCAGACCGTCGCCGCGTCGTTCGTTTCGCATCAGCCGTGTGTTTGTGTGTGTTT
ACCTTCGCTGATTCCTTACCATTTACCATTTTTGTTGTTGTTGTTTTAACCGTTTTGCTG
TTTAAAACTTTTAAACCCAGGTTACTGGACCACAGTGCCTGTGTGTTTGTTATATTTACC
TTGCTGATTCCTAACATTTTTTTGGAGGTTTTCGTTTAAAAAAAAAAA
clustalw multiple alignements is not computed in this case