These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6435#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 4279 fasta sequence [GAGAAACCCTAGGCTTGGTTGGCTCCAAGCTTCGCAGCCATCGCCGCCTCGGCATAAACCCTTCTACTCCGCAGCCATCGCCGCCTCGAGCTGAGCTTGAGATTCGCGGGGGGCGCAGCAATGGCCGGGAAGAAGAGGCCGCCGACCGCGCTCTCCGAGCCCGAAGCCGCCGCCGCCGCCGAGGAGGAGGAGGCCGCAGCCAAGACGGCCCCGGCTGCGGAGGCGCCAGCGAAGAAGAAGAAGCTGGCCATGGAGCGGAAGAAGCAGCGGAAGGAGATTGACAAGGAGA-GGCACCGCCAGTCCGCTGAATCGGACGCCGCTGCCGCTAAGCCGAAGCAGCCGGCGGAGGTGGCGCCGGAGGCTGCGGCTGCGGCTGCGGCGGCGCCCGTGGCTCCTCCGCCTGTGATTCCGGTGGTGTCGGGGCCTGGGCTTCACATGAACGTGTTCAGGGACCTGGCTTCGCCTGAGGCGTCGCAGAGGGAGGCCGCGGCGGAGGCGCTCGTGGCGGAGCTCAGGCAGGTGCAGGTGGCGCACGAGAAGGGTGGGCGGAAGGAGGGGGAGAGCGAAGCGGAGGGTGGAGATGGGTCGTCGAGGATGGAGGCCGAGAAGGACGATGGCCTGGAGAACTGCGCGCCGTCGGTGCGTTACGCCATTCGGCGGCTCATTCGCGGTATCTCTTCTTCTAGAGAGTTTGCAAGGCAAGGATTCGCATTGGGTCTTGCAGTTGTGCTCGAATCAATTCATGCAATCAGCGTCGAAGCAATCATGAAGTTGATACCTAATTTGTTAGAGTATTCAGCTTCAATGAGGGGACCGGAAGCTAAGGACAATCTTTTGGGACGATTATTTGGTTATGGATCAATTGTTAGGTCTGGACGGGTCTCGGGACAGTGGGCACATGAAGAAGGTTCTCCCATTGTCAAGGATTTTGTGGATGAGGTTATCAAACTTGGTAGCAAGAAACGATATTTAACTGAGCCCGCTGTTGCCGTTATCCTGGATTTAGCTGGAAAGCTGCCAGAGGAAGCTATAATATCTGAGATTCTGGAAGCTCCCAGTGTGCAAGATTGGTTCAACAGAGCTGCTGATGCTGGAGATCCGGATGCACTCTATCTGGCTTTGAAGTTGCAAGAGAAAACAAATGCCCAGGAGATATTTGGGAAGCTTCTGCCATATCCATTCAGTCCAGAGGGTTTTTTTGCAGAAGAACATCTTCTTTCAATTGCTGCTTGTTTCAAGGAATCCACATTTTGTCTTCCACGCATTCATAGTTTGTGGCTTGTTATCACGGACATGCTTGTTCGAGAGGCAGCTTCACAGAGTGATATTGCCACAAGCTCAAGCAAGAAGCACAAAAAGAATAAGAAAGGCAGCTCCTCTGAGGATACAAAAAAGAATCTACATACTTTCTGTGAGGTTATAATTGAAGGAACATTGCTGCTATCATCTCATGATAGGAAGCATTTGGCATTTAATATTCTTCTTAATCTCCTTCCAAGGCTATCCCCATCTTCGATTCAAGTAATTCTGTCCAGCAAGGTTGTTCATGGTTTGATGGATGTTCTGTCAAATGAATCGTCATGGTTGCACAATGCCGGCCAACATTTTCTGAAGGAGTTAGTAAGTTTAGTGAGTGATGATAATGATCGACGTGTTGCTGTTATTACTAACTTGCAGAAGTATACTGGTGGAAGATTTGACTGCATGACAAAAACGAGAACTGTTAAAGATTTGGTTGCCAAGTTCCGAAGTGGTCAAGATTGTTTGTGTCTTGTGCAGAGTTTGATGTCACTCTTTGTAGATGAAAGCTCTGTTACAGACGAACCATCTGATCAAAGTCAGACAACTGATGAGAATTCGGAAGTTGGTTCAATGGAAGATAAGGACCTTTTTGGCCAAGGGAGTGCTGACCTTTTGAAAAGTTGGATAGTGACTACAATTCCTTGTGTTTTAAAAAATCTGAAGCTGACATCTAAAGGGAATTCACTGACAGATTCTGAAATGGTTAAGTGCATTGAAGAAAAATTTCTAGTGCAGACTGAGGTATTGAAATTCCTTGCAGTTCAAGGTCTTTTTTCAGCGTCTTTGGGATATGAGGTGACATCATTTGAGCTGCACGAGAAGTTCAAATGGCCAAAGCCAGCTATATCAACATCAATACGCAATGAATGCATTGAACAACTTCAATTCTTAATAGAAGATGCACAAAAGGATGAAGCTTTACACGTTAGTGAGGTTAAGTCTAATGACCTGGGCTTCTACTTCATGCGCTTCATTAACACCCTTTGCAACATTCCCTCAGTTTCACTCTTCCGGACCTTGAGCAGCAACGACGACAATGCATTCAAGAAGTTACTGGATGTAGAATCTCTGCTTTTCTATGAGGAAAGAAAAGTTGGCCCTGGCTTGGATTCGACTAAAATGCATGCGATGCGTTATCTCCTTATTCAGTTGCTCCTCCAAGTTCTTCTCCATCCAGATGAGTACTGGGAGGCAGCAATTGATGTGACTATATGCTGCAAGAAATCGTTCCCTTCCATCGTTCAGAATGACAAATCCAGTGGACAGCCATCTAATGAGGGTGCGGAGGTGTTTAATGAGGATGGGCCAGGCAAATCTAACAAGGATGGGCCGGAAGAGCATAATGATGATGCGTCAGAGGATTCTAATGAGGACGGGCCACTAGAGTTTATGGATGTACTTGTCCAGACTTTTCTTTCTGTTTTGCCCCATGTGTCTGGCCCTGTATGTTTCTCCATCGAACAGGTCTTCCGTGTGGTCTGTGATGAAATTACAGAAACAGGGCTTCTTGACATGTTGAGAGTTGTGAAGATAGATTTGAAAGGTTCTCGTCGCCAGTCAGGTAGTGATGATGATGAAGATGATGCATGTGTTGACATTGAAGATGATGATGAAACCATTGTGGAGGACGCGGAGGTTGGGGACACTGATTCTACTGCAGACGGACTGGATGAGGAAATGGATGATGATTCAGCTGATGAAGTAGATGAAGGTCAAGATGATTTGGAAGAATCAGTTGCCCATGAGTCAAAGGATGGAGATGGTGCAGAAGTTACCAAAGATGGGGATGACTCAGATGATTCAGATGGTATGGATGATGATGCTATGTTCCGCATTGATCCTTACATTGCGAGGATTTTCAAGGAGCGCAACCTTCCTGGCAGTGAAACTAAGCAATCTCAACTTATGCGGTTCAAGCTCCGTGTCCTTACATTACTTGAGATATATCTTCAGAGGAATACAGGAAATAATCTGGTGCTGGAGGTCTATTCTTTCTTAATGCAAGCTTTTGTGAAGTCACATAGTGCTGATGGCAGTGAGCAATTCAAGCAACGTATAGGTGGTATATTGCAGAAAAGGATATTCAAAGCCAAGGATTATCCTAAGGGTGATGGTGTAGAGATTAGTACTCTTGAAAGTTTGCTGGAGAAAGCTCTAAAATTGGCATCGCGGTCACGATACACCACGGTTGCTTCTGTAGCCCAAAATGCTGCATTTTGGCTTCTGAAGATCATCAATTCAAAGAGTCATTCGAAACAGGAGCTTGCGAGTGTTGTCGAAAAGTTCCAATATATATTGACCGACTACTTCAACAACAAGAAATCGCGGTTGAAGCTTGGGTTTGTGAAGGAGGCTGTCCGGAGGAATCCTTGGGTAGGAGAGGAGCTCTTTGGATTTGTTCTGCAGAAGATTGGATGCACAAAAGCTGAATATCGAAGAGTTCAAACGCTAGAATTGGTAGACTGCATACTCAAATCTTGGGCTGGTGATGATTCGAGTGCATCGAAGGTGTTGAAGAAGCACCTTTCTCAGTTGTGCGAGCTGATACAAGAAGTTCTTACAAAGATCCCAGAAAACAAGTCACGTCGTCAAGAAGTCCGGAGATTTTGCACCCGAGTATTGCAGACAGTGACAAAGCTTAACCTCAAAGACCGGTTTCAGAAGAAATTGAATCCTGAAACGCTCTCCCTTTGTGAGGCACAGCTAGGAGCTGCTTTTGTTCGCTTTCAAAAATGACATTACATTTATGAGGAGACTGTATTTGTTCCCTTTCGAAAATGATAGTCACTAGAAATATTTTGAGCTGAGCTAAGTTTTGTTCCTCATTTCAGCTACATGAGTAGATTCTATCAAATTAAGCTGTATCGGTTTTTGTGACAGTATCTGAAAGGAAAAGATATTCACTGTTATGTTAGCAATACTAATTGGTATAGACGCGCGCAGCACAGCTGCCATGCAATTTGCTCAAAAAAAAAAA] [+] EMBL AK100570 [GAGAAACCCTAGGCTTGGTTGGCTCCAAGCTTCGCAGCCATCGCCGCCTCGGCATAAACCCTTCTACTCCGCAGCCATCGCCGCCTCGAGCTGAGCTTGAGATTCGCGGGGGGCGCAGCAATGGCCGGGAAGAAGAGGCCGCCGACCGCGCTCTCCGAGCCCGAAGCCGCCGCCGCCGCCGAGGAGGAGGAGGCCGCAGCCAAGACGGCCCCGGCTGCGGAGGCGCCAGCGAAGAAGAAGAAGCTGGCCATGGAGCGGAAGAAGCAGCGGAAGGAGATTGACAAGGAGA GGCACCGCCAGTCCGCTGAATCGGACGCCGCTGCCGCTAAGCCGAAGCAGCCGGCGGAGGTGGCGCCGGAGGCTGCGGCTGCGGCTGCGGCGGCGCCCGTGGCTCCTCCGCCTGTGATTCCGGTGGTGTCGGGGCCTGGGCTTCACATGAACGTGTTCAGGGACCTGGCTTCGCCTGAGGCGTCGCAGAGGGAGGCCGCGGCGGAGGCGCTCGTGGCGGAGCTCAGGCAGGTGCAGGTGGCGCACGAGAAGGGTGGGCGGAAGGAGGGGGAGAGCGAAGCGGAGGGTGGAGATGGGTCGTCGAGGATGGAGGCCGAGAAGGACGATGGCCTGGAGAACTGCGCGCCGTCGGTGCGTTACGCCATTCGGCGGCTCATTCGCGGTATCTCTTCTTCTAGAGAGTTTGCAAGGCAAGGATTCGCATTGGGTCTTGCAGTTGTGCTCGAATCAATTCATGCAATCAGCGTCGAAGCAATCATGAAGTTGATACCTAATTTGTTAGAGTATTCAGCTTCAATGAGGGGACCGGAAGCTAAGGACAATCTTTTGGGACGATTATTTGGTTATGGATCAATTGTTAGGTCTGGACGGGTCTCGGGACAGTGGGCACATGAAGAAGGTTCTCCCATTGTCAAGGATTTTGTGGATGAGGTTATCAAACTTGGTAGCAAGAAACGATATTTAACTGAGCCCGCTGTTGCCGTTATCCTGGATTTAGCTGGAAAGCTGCCAGAGGAAGCTATAATATCTGAGATTCTGGAAGCTCCCAGTGTGCAAGATTGGTTCAACAGAGCTGCTGATGCTGGAGATCCGGATGCACTCTATCTGGCTTTGAAGTTGCAAGAGAAAACAAATGCCCAGGAGATATTTGGGAAGCTTCTGCCATATCCATTCAGTCCAGAGGGTTTTTTTGCAGAAGAACATCTTCTTTCAATTGCTGCTTGTTTCAAGGAATCCACATTTTGTCTTCCACGCATTCATAGTTTGTGGCTTGTTATCACGGACATGCTTGTTCGAGAGGCAGCTTCACAGAGTGATATTGCCACAAGCTCAAGCAAGAAGCACAAAAAGAATAAGAAAGGCAGCTCCTCTGAGGATACAAAAAAGAATCTACATACTTTCTGTGAGGTTATAATTGAAGGAACATTGCTGCTATCATCTCATGATAGGAAGCATTTGGCATTTAATATTCTTCTTAATCTCCTTCCAAGGCTATCCCCATCTTCGATTCAAGTAATTCTGTCCAGCAAGGTTGTTCATGGTTTGATGGATGTTCTGTCAAATGAATCGTCATGGTTGCACAATGCCGGCCAACATTTTCTGAAGGAGTTAGTAAGTTTAGTGAGTGATGATAATGATCGACGTGTTGCTGTTATTACTAACTTGCAGAAGTATACTGGTGGAAGATTTGACTGCATGACAAAAACGAGAACTGTTAAAGATTTGGTTGCCAAGTTCCGAAGTGGTCAAGATTGTTTGTGTCTTGTGCAGAGTTTGATGTCACTCTTTGTAGATGAAAGCTCTGTTACAGACGAACCATCTGATCAAAGTCAGACAACTGATGAGAATTCGGAAGTTGGTTCAATGGAAGATAAGGACCTTTTTGGCCAAGGGAGTGCTGACCTTTTGAAAAGTTGGATAGTGACTACAATTCCTTGTGTTTTAAAAAATCTGAAGCTGACATCTAAAGGGAATTCACTGACAGATTCTGAAATGGTTAAGTGCATTGAAGAAAAATTTCTAGTGCAGACTGAGGTATTGAAATTCCTTGCAGTTCAAGGTCTTTTTTCAGCGTCTTTGGGATATGAGGTGACATCATTTGAGCTGCACGAGAAGTTCAAATGGCCAAAGCCAGCTATATCAACATCAATACGCAATGAATGCATTGAACAACTTCAATTCTTAATAGAAGATGCACAAAAGGATGAAGCTTTACACGTTAGTGAGGTTAAGTCTAATGACCTGGGCTTCTACTTCATGCGCTTCATTAACACCCTTTGCAACATTCCCTCAGTTTCACTCTTCCGGACCTTGAGCAGCAACGACGACAATGCATTCAAGAAGTTACTGGATGTAGAATCTCTGCTTTTCTATGAGGAAAGAAAAGTTGGCCCTGGCTTGGATTCGACTAAAATGCATGCGATGCGTTATCTCCTTATTCAGTTGCTCCTCCAAGTTCTTCTCCATCCAGATGAGTACTGGGAGGCAGCAATTGATGTGACTATATGCTGCAAGAAATCGTTCCCTTCCATCGTTCAGAATGACAAATCCAGTGGACAGCCATCTAATGAGGGTGCGGAGGTGTTTAATGAGGATGGGCCAGGCAAATCTAACAAGGATGGGCCGGAAGAGCATAATGATGATGCGTCAGAGGATTCTAATGAGGACGGGCCACTAGAGTTTATGGATGTACTTGTCCAGACTTTTCTTTCTGTTTTGCCCCATGTGTCTGGCCCTGTATGTTTCTCCATCGAACAGGTCTTCCGTGTGGTCTGTGATGAAATTACAGAAACAGGGCTTCTTGACATGTTGAGAGTTGTGAAGATAGATTTGAAAGGTTCTCGTCGCCAGTCAGGTAGTGATGATGATGAAGATGATGCATGTGTTGACATTGAAGATGATGATGAAACCATTGTGGAGGACGCGGAGGTTGGGGACACTGATTCTACTGCAGACGGACTGGATGAGGAAATGGATGATGATTCAGCTGATGAAGTAGATGAAGGTCAAGATGATTTGGAAGAATCAGTTGCCCATGAGTCAAAGGATGGAGATGGTGCAGAAGTTACCAAAGATGGGGATGACTCAGATGATTCAGATGGTATGGATGATGATGCTATGTTCCGCATTGATCCTTACATTGCGAGGATTTTCAAGGAGCGCAACCTTCCTGGCAGTGAAACTAAGCAATCTCAACTTATGCGGTTCAAGCTCCGTGTCCTTACATTACTTGAGATATATCTTCAGAGGAATACAGGAAATAATCTGGTGCTGGAGGTCTATTCTTTCTTAATGCAAGCTTTTGTGAAGTCACATAGTGCTGATGGCAGTGAGCAATTCAAGCAACGTATAGGTGGTATATTGCAGAAAAGGATATTCAAAGCCAAGGATTATCCTAAGGGTGATGGTGTAGAGATTAGTACTCTTGAAAGTTTGCTGGAGAAAGCTCTAAAATTGGCATCGCGGTCACGATACACCACGGTTGCTTCTGTAGCCCAAAATGCTGCATTTTGGCTTCTGAAGATCATCAATTCAAAGAGTCATTCGAAACAGGAGCTTGCGAGTGTTGTCGAAAAGTTCCAATATATATTGACCGACTACTTCAACAACAAGAAATCGCGGTTGAAGCTTGGGTTTGTGAAGGAGGCTGTCCGGAGGAATCCTTGGGTAGGAGAGGAGCTCTTTGGATTTGTTCTGCAGAAGATTGGATGCACAAAAGCTGAATATCGAAGAGTTCAAACGCTAGAATTGGTAGACTGCATACTCAAATCTTGGGCTGGTGATGATTCGAGTGCATCGAAGGTGTTGAAGAAGCACCTTTCTCAGTTGTGCGAGCTGATACAAGAAGTTCTTACAAAGATCCCAGAAAACAAGTCACGTCGTCAAGAAGTCCGGAGATTTTGCACCCGAGTATTGCAGACAGTGACAAAGCTTAACCTCAAAGACCGGTTTCAGAAGAAATTGAATCCTGAAACGCTCTCCCTTTGTGAGGCACAGCTAGGAGCTGCTTTTGTTCGCTTTCAAAAATGACATTACATTTATGAGGAGACTGTATTTGTTCCCTTTCGAAAATGATAGTCACTAGAAATATTTTGAGCTGAGCTAAGTTTTGTTCCTCATTTCAGCTACATGAGTAGATTCTATCAAATTAAGCTGTATCGGTTTTTGTGACAGTATCTGAAAGGAAAAGAT ] [+] EMBL C27179 [ GCTTNGTTGGCTCCAAGCTTCGCAGCCATCGCCGCCTCGGCATAAACCCTTCTACTCCGCAGCCATCGCCGCCTCGAGCTGAGCTTGAGATTCGCGGGGGGCGCA NAATGGCCGGGAAGAAGAGGCCGCCGACCGCGCTCTCCGAGCCCGAAGCCGNCGCCGNCGCCGAGGAGGAGGAGGCCGCAGNCAAGACGNNCCCGGCTGCGGAGGCGCCA CGAAGAAGAAGAAGCTGGCCATNGAGCGGAAGAAGCAGCGGAAGGAGATTGACAAGGAGAGGGCACCG ] [+] EMBL AK059533 [ TGATGCATGTGTTGACATTGAAGATGATGATGAAACCATTGTGGAGGACGCGGAGGTTGGGGACACTGATTCTACTGCAGACGGACTGGATGAGGAAATGGATGATGATTCAGCTGATGAAGTAGATGAAGGTCAAGATGATTTGAAAGAATCAGTTGCCCATGAGTCAAAGGATGGAGATGGTGCAGAAGTTACCAAAGATGGGGATGACTCAGATGATTCAGATGGTATGGATGATGATGCTATGTTCCGCATTGATCCTTACATTGCGAGGATTTTCAAGGAGCGCAACCTTCCTGGCAGTGAAACTAAGCAATCTCAACTTATGCGGTTCAAGCTCCGTGTCCTTACATTACTTGAGATATATCTTCAGAGGAATACAGGAAATAATCTGGTGCTGGAGGTCTATTCTTTCTTAATGCAAGCTTTTGTGAAGTCACATAGTGCTGATGGCAGTGAGCAATTCAAGCAACGTATAGGTGGTATATTGCAGAAAAGGATATTCAAAGCCAAGGATTATCCTAAGGGTGATGGTGTAGAGATTAGTACTCTTGAAAGTTTGCTGGAGAAAGCTCTAAAATTGGCATCGCGGTCACGATACACCACGGTTGCTTCTGTAGCCCAAAATGCTGCATTTTGGCTTCTGAAGATCATCAATTCAAAGAGTCATTCGAAACAGGAGCTTGCGAGTGTTGTCGAAAAGTTCCAATATATATTGACCGACTACTTCAACAACAAGAAATCGCGGTTGAAGCTTGGGTTTGTGAAGGAGGCTGTCCGGAGGAATCCTTGGGTAGGAGAGGAGCTCTTTGGATTTGTTCTGCAGAAGATTGGATGCACAAAAGCTGAATATCGAAGAGTTCAAACGCTAGAATTGGTAGACTGCATACTCAAATCTTGGGCTGGTGATGATTCGAGTGCATCGAAGGTGTTGAAGAAGCACCTTTCTCAGTTGTGCGAGCTGATACAAGAAGTTCTTACAAAGATCCCAGAAAACAAGTCACGTCGTCAAGAAGTCCGGAGATTTTGCACCCGAGTATTGCAGACAGTGACAAAGCTTAACCTCAAAGACCGGTTTCAGAAGAAATTGAATCCTGAAACGCTCTCCCTTTGTGAGGCACAGCTAGGAGCTGCTTTTGTTCGCTTTCAAAAATGACATTACATTTATGAGGAGACTGTATTTGTTCCCTTTCGAAAATGATAGTCACTAGAAATATTTTGAGCTGAGCTAAGTTTTGTTCCTCATTTCAGCTACATGAGTAGATTCTATCAAATTAAGCTGTATCGGTTTTTGTGACAGTATCTGAAAGGAAAAGAT ] [-] EMBL CA762470 [ ATTGACCGACTACTTCAACAACAAGAAATCGCGGTTGAAGCTTGGGTTTGTGAAGGAGGCTGTCCGGAGGAATCCTTGGGTAGGAGAGGAGCTCTTTGGATTTGTTCTGCAGAAGATTGGATGCACAAAAGCTGAATATCGAAGAGTTCAAACGCTAGAATTGGTAGACTGCATACTCAAATCTTGGGCTGGTGATGATTCGAGTGCATCGAAGGTGTTGAAGAAGCACCTTTCTCAGTTGTGCGAGCTGATACAAGAAGTTCTTACAAAGATCCCAGAAAACAAGTCACGTCGTCAAGAAGTCCGGAGATTTTGCACCCGAGTATTGCAGACAGTGACAAAGCTTAACCTCAAAGACCGGTTTCAGAAGAAATTGAATCCTGAAACGCTCTCCCTTTGTGAGGCACAGCTAGGAGCTGCTTTTGTTCGCTTTCAAAAATGACATTACATTTATGAGGAGACTGTATTTGTTCCCTTTCGAAAATGATAGTCACTAGAAATATTTTGAGCTGAGCTAAGTTTTGTTCCTCATTTCAGCTACATGAGTAGATTCTATCAAATTAAGCTGTATCGGTTTTTGTGACAGTATCTGAAAGGAAAAGATATTCACTGTTATGTTAGCAATACTAATTGGTATAGACGCGCGCAGCACAGCTGCCATGCAATTTGCTCAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||