Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6455 cluster # 6455       Sequences # 4       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6455#0 length = 3260 sequences # 3  
 consensus_6455#1 length = 670 sequences # 1  
consensusID : consensus_6455#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3260
fasta sequence 
                              [TCTCCCCAGCCTATGCTCCTCACCGGAGGAGGCTAAATATATTAACAGGACTTGTATAAAGTTTTCATCTGCAAGTTGGAGTTGGAAGCCAATGTGAAGTTGAGAGGCTTAGACATACAGAATAAAGTGGATGGGGAAGAGAGCTCTGCTGTCAGGTGAAGCCTGGGGAATCGTCTTCACTTTTTGATCCAGCAGCAAATGCATATGTTCCCGACTCAGCGAGGAGGTCTGCTTTGATCTCCAGTCAAGAATTTGATTAAAAAACATACAACTAGAATCAGGTATCATTCTGCAGCACCCTACATTGTGATTTGCCTGGCAAAGGATGTGTTCTCCAGGATAATGGTGGTTTAGCTTCTGGTTTACTTTATTATTTGGTGGATTTTATCATCATAAATCAGTACAATGGGGAAACACTCAGCTGAATCAGGTACTAGTATGCTCTTGCATGGAGATTTGGACATACAGATAGTGGAAGCAAAATGTCTTCCCAATATGGATCTTATGACTGAAAGGATGCGAAAATGCTTCACTGGCTACGGCGCTTGTAGTACTGAGTGTGGGAAGTCTGATCCACATACAGACGTGAGGAAGATCATTACTAGTGATCCATATGTTTCGGTTTGCCTCTCAGGAGCAACAGTGGCACAAACTCGAGTCATTGCAAACTCAGAGAATCCTAAATGGGATGAACATTTTTATGTTCAGGTTGCCCATTCTGTTAGCAGAGTTGAGTTTCACGTAAAAGACAATGATGTTTTTGGAGCAGAACTTATAGGCGTGGCTTCAGTACCAGTTGAAAACATCACACCAGGTGATACCGTCAGTGGTTGGTTTCCAATATCTGGTCAGTATAGTAATCCTATGAAGGCATCTCCTGAACTTCATTTGTCTATCCAGTACAAGCCAATTGAGCAGAATCCATTGTACAAAGATGGAGTTGGTTCTGACGGTTGTCAGAGTATTGGTGTGCCAAATGCTTATTTTCCTCTTCGAAAGGGTGGTATGGTCACTCTATATCAAGATGCCCATATTCCTGATGACTTTTGTCCTAAAATTGAAATTGATGGTGGAAGAGTATACGAACAAAATAAATGTTGGGAAGACATTTGCCATGCAATTGCTGAGGCTCATCACCTTATTTATATAATTGGTTGGTCGTTGTATCACCCTGTCAAGCTGGTAAGGGAATCAACAAAACCTGTGCCCAATGGAAGCCCACCAACCCTTGGGGGGCTTTTGAAAACCAAGGTTCAGGAGGGGGTCCGTGTTATTGTGTTACTTTGGGATGACAAAACATCACATGACAAATTTCTCTTGAAAACGGATGGACTCATGCATACACATGACGAGGAAGCTCGGAAGTTTTTCAGGCATTCTGGTGTCCATTGTGTGTTGGCTCCTCGCTACGCTAGCAACAAACTTAGCATTTTTAAGCAACAGGTTGTAGGAACTTTGTTTACGCACCATCAGAAATGTGTCATTGTTGACACCCAAGTCATAGGGAACAATAGAAAAATAACTGCTTTTATTGGTGGCCTAGACTTATGTGATGGCAGATATGATACACCTGAACACAGGCTCTTCAAGGATCTTGAGACCGTCTTCAAGGATGATTTCCATAATCCCACATTCCAAGTTAATAAGTCTGGGCCTAGACAACCATGGCATGATTTACATTGCAAGATTGAGGGTCCAGCTGCCTATGATATACTTACAAACTTTGAACAGAGATGGAGAAAATCTGCAAAATGGAAAGTCAGCGTTAGAAGAGCTGTAAGTTGGCACCATGATACCTTGGTAAAAATAAACCGGATGTCGTGGATTGTCTCCCCCTCTGCAGATGAGTTAAATGCACGTGTTTGTGAACAAGATGATCCAGAAAACTGGCATGTACAGATATTCCGGTCCATTGATTCAGGATCAGTAAAAGGGTTCCCTAAACTTGTTCAGGAGGCTGAGTCACAGAATCTTGTCTGCGCGAAAAATCTGCAGATAGACAAGAGCATACATAATGCATATGTGAAAGCTATCAGATCTGCACAACACTATATCTACATTGAAAATCAATATTTTATTGGATCTTCATACTACTGGTCTTCAAATAGAAGTGCAGGTGCAGAGAATTTGATACCGATCGAATTGGCCATAAAGATTGCAAGAAGGATTAAAGCTAGGGAAAGATTTGCAGCTTACATTGTTATACCAATGTGGCCCGAGGGTAATCCAACAACTGCTGCTATGCAGGAGATCATCTTTTGGCAGGGACAAACAATGTCCATGATGTACAAGATTGTCGCAGAAGCACTACAGAAGGAGGGGTTAGATGATACGCATCCACAGGATTACCTTAACTTCTACTGTCTTGGTAAGCGTGAAGTCTCAAATGACGTATCTACAACAAGCCAATCCAATGAGAATTCCCCACAGCGCCTGGTCCAAAAGTTCAAGCGATTCATGATCTACGTGCACTCCAAGGGGATGATTGTCGATGATGAGTATGTGCTCATAGGATCAGCCAACATAAATCAGAGGTCCATGGATGGCTCAAGGGACACCGAGATCGCTATGGGCGCCTACCAGCCTCACTACAGCTGGGCAGGACGCAAGAAAGCTCCACGAGGACAGGTGTACGGGTACAGGATGTCGCTGTGGGCGGAGCACCTGGGTACAGTGGAGGAGTGCTTCCGTTGGCCTCATTCCGTGGAGTGCGTCCGGCAGGTGAATGAAATGGCAGAAGAGAACTGGGCGCGCTACGTATCACCGGAGATGGTGAACATGCGGGGGCACCTCATGAGGTACCCCATCAATGTTGAACGGGATGGTAGGGTTGGTCCGGTGCATGGGTACGAGTGCTTCCCGGATGTCGGTGGCAAGGTGCTCGGCACACACTCTTCTCTTCCAAATGCATTGACAACTTGAATTGGCTGGAGCATGAACGAGCTAGATGTGGCAACTACCACTAATACTTTGAAAAGAATCATTTTGGGGCGTGAAGCTTTTTGTTTGTACATGAAAGAGAGACTGCTTGATACCAGTTCCACACATTGCTGTTATAGAGTACTGCAGTTCGACTGCTGCATATGCAGTATGTATAATAGGATTTCAATTATAATCATCTCTGGCTGGATGCAAATACATCTGTTCTTGCATTTAGTTTGTTGTAAAAGGCACCTTCCCTTTATTCAGACAGTCGGTTAGCCTTAAAAACAAAATTCTTGGTGGCACATGATTCAAGAATTTATTGGAATGCCTCAGAA]

[+] EMBL AK070203             [TCTCCCCAGCCTATGCTCCTCACCGGAGGAGGCTAAATATATTAACAGGACTTGTATAAAGTTTTCATCTGCAAGTTGGAGTTGGAAGCCAATGTGAAGTTGAGAGGCTTAGACATACAGAATAAAGTGGATGGGGAAGAGAGCTCTGCTGTCAGGTGAAGCCTGGGGAATCGTCTTCACTTTTTGATCCAGCAGCAAATGCATATGTTCCCGACTCAGCGAGGAGGTCTGCTTTGATCTCCAGTCAAGAATTTGATTAAAAAACATACAACTAGAATCAGGTATCATTCTGCAGCACCCTACATTGTGATTTGCCTGGCAAAGGATGTGTTCTCCAGGATAATGGTGGTTTAGCTTCTGGTTTACTTTATTATTTGGTGGATTTTATCATCATAAATCAGTACAATGGGGAAACACTCAGCTGAATCAGGTACTAGTATGCTCTTGCATGGAGATTTGGACATACAGATAGTGGAAGCAAAATGTCTTCCCAATATGGATCTTATGACTGAAAGGATGCGAAAATGCTTCACTGGCTACGGCGCTTGTAGTACTGAGTGTGGGAAGTCTGATCCACATACAGACGTGAGGAAGATCATTACTAGTGATCCATATGTTTCGGTTTGCCTCTCAGGAGCAACAGTGGCACAAACTCGAGTCATTGCAAACTCAGAGAATCCTAAATGGGATGAACATTTTTATGTTCAGGTTGCCCATTCTGTTAGCAGAGTTGAGTTTCACGTAAAAGACAATGATGTTTTTGGAGCAGAACTTATAGGCGTGGCTTCAGTACCAGTTGAAAACATCACACCAGGTGATACCGTCAGTGGTTGGTTTCCAATATCTGGTCAGTATAGTAATCCTATGAAGGCATCTCCTGAACTTCATTTGTCTATCCAGTACAAGCCAATTGAGCAGAATCCATTGTACAAAGATGGAGTTGGTTCTGACGGTTGTCAGAGTATTGGTGTGCCAAATGCTTATTTTCCTCTTCGAAAGGGTGGTATGGTCACTCTATATCAAGATGCCCATATTCCTGATGACTTTTGTCCTAAAATTGAAATTGATGGTGGAAGAGTATACGAACAAAATAAATGTTGGGAAGACATTTGCCATGCAATTGCTGAGGCTCATCACCTTATTTATATAATTGGTTGGTCGTTGTATCACCCTGTCAAGCTGGTAAGGGAATCAACAAAACCTGTGCCCAATGGAAGCCCACCAACCCTTGGGGGGCTTTTGAAAACCAAGGTTCAGGAGGGGGTCCGTGTTATTGTGTTACTTTGGGATGACAAAACATCACATGACAAATTTCTCTTGAAAACGGATGGACTCATGCATACACATGACGAGGAAGCTCGGAAGTTTTTCAGGCATTCTGGTGTCCATTGTGTGTTGGCTCCTCGCTACGCTAGCAACAAACTTAGCATTTTTAAGCAACAGGTTGTAGGAACTTTGTTTACGCACCATCAGAAATGTGTCATTGTTGACACCCAAGTCATAGGGAACAATAGAAAAATAACTGCTTTTATTGGTGGCCTAGACTTATGTGATGGCAGATATGATACACCTGAACACAGGCTCTTCAAGGATCTTGAGACCGTCTTCAAGGATGATTTCCATAATCCCACATTCCAAGTTAATAAGTCTGGGCCTAGACAACCATGGCATGATTTACATTGCAAGATTGAGGGTCCAGCTGCCTATGATATACTTACAAACTTTGAACAGAGATGGAGAAAATCTGCAAAATGGAAAGTCAGCGTTAGAAGAGCTGTAAGTTGGCACCATGATACCTTGGTAAAAATAAACCGGATGTCGTGGATTGTCTCCCCCTCTGCAGATGAGTTAAATGCACGTGTTTGTGAACAAGATGATCCAGAAAACTGGCATGTACAGATATTCCGGTCCATTGATTCAGGATCAGTAAAAGGGTTCCCTAAACTTGTTCAGGAGGCTGAGTCACAGAATCTTGTCTGCGCGAAAAATCTGCAGATAGACAAGAGCATACATAATGCATATGTGAAAGCTATCAGATCTGCACAACACTATATCTACATTGAAAATCAATATTTTATTGGATCTTCATACTACTGGTCTTCAAATAGAAGTGCAGGTGCAGAGAATTTGATACCGATCGAATTGGCCATAAAGATTGCAAGAAGGATTAAAGCTAGGGAAAGATTTGCAGCTTACATTGTTATACCAATGTGGCCCGAGGGTAATCCAACAACTGCTGCTATGCAGGAGATCATCTTTTGGCAGGGACAAACAATGTCCATGATGTACAAGATTGTCGCAGAAGCACTACAGAAGGAGGGGTTAGATGATACGCATCCACAGGATTACCTTAACTTCTACTGTCTTGGTAAGCGTGAAGTCTCAAATGACGTATCTACAACAAGCCAATCCAATGAGAATTCCCCACAGCGCCTGGTCCAAAAGTTCAAGCGATTCATGATCTACGTGCACTCCAAGGGGATGATTGTCGATGATGAGTATGTGCTCATAGGATCAGCCAACATAAATCAGAGGTCCATGGATGGCTCAAGGGACACCGAGATCGCTATGGGCGCCTACCAGCCTCACTACAGCTGGGCAGGACGCAAGAAAGCTCCACGAGGACAGGTGTACGGGTACAGGATGTCGCTGTGGGCGGAGCACCTGGGTACAGTGGAGGAGTGCTTCCGTTGGCCTCATTCCGTGGAGTGCGTCCGGCAGGTGAATGAAATGGCAGAAGAGAACTGGGCGCGCTACGTATCACCGGAGATGGTGAACATGCGGGGGCACCTCATGAGGTACCCCATCAATGTTGAACGGGATGGTAGGGTTGGTCCGGTGCATGGGTACGAGTGCTTCCCGGATGTCGGTGGCAAGGTGCTCGGCACACACTCTTCTCTTCCAAATGCATTGACAACTTGAATTGGCTGGAGCATGAACGAGCTAGATGTGGCAACTACCACTAATACTTTGAAAAGAATCATTTTGGGGCGTGAAGCTTTTTGTTTGTACATGAAAGAGAGACTGCTTGATACCAGTTCCACACATTGCTGTTATAGAGTACTGCAGTTCGACTGCTGCATATGCAGTATGTATAATAGGATTTCAATTATAATCATCTCTGGCTGGATGCAAATACATCTGTTCTTGCATTTAGTTTGTTGTAAAAGGCACCTTCCCTTTATTCAGACAGTCGGTTAGCCTTAAAAACAAAATTCTTGGTGGCACATGATTCAAGAATTTATTGGAATGCCTCAGAA]
[+] EMBL AU172744             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGTAAAAGGGTTCCCTAAACTTGTTCAGGAGGCTGAGTCACAGAATCTTGTCTGCGCGAAAAATCTGCAGATAGACAAGAGCATACATAATGCATATGTGAAAGCTATCAGATCTGCACAACACTATATCTACATTGAAAATCAATATTTTATTGGATCTTCATACTACTGGTCTTCAAATAGAAGTGCAGGTGCAGAGAATTTGATACCGATCGAATTGGCCATAAAGATTGCAAGAAAGATTAAAGCTAGGGAAAGATTTGCAGCTTACATTGTTATACCAATGTGGCCCGAGGGTAATCCAACAACTGCTGCTATGCAGGAGATCCTCTTTTGGCAGGGACAAACAATGTCCATGATGTACAAGATTGTCGCAGAAGCACTACAGAAGGAGGGGTTAGATGATACGCATCCACAGGATTACCTTAACTTCTACTGTCTTGGTAAGCGTGAAGTCTCAAATGACGTATCTACAACAAGCCAATCCAATGAGAATTCCCCACAGCGCCTGGTCCAAAAGTTCAAGCGATTCATGATCTACGTGCACTCCAAGGGGATGATTGTCGATGATGAGTATGTGCTCATAGGATCAGCCCACATAAATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU172745             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAATGCATTGACAACTTGAATTGGCTGGAGCATGAACGAGCTAGATGTGGCAACTACCACTAATACTTTGAAAAGAATCATTTTGGGGCGTGAAGCTTTTTGTTTGTACATGAAANAGAGACTGCTTGATACCAGTTCCACACATTGCTGTTATAGAGTACTGCAGTTCGACTGCTGCATATGCAGTATGTATAATAGGATTTCAATTATAATCATCTCTGGCTGGATGCAAATACATCTGTTCTTGCATTTAGTTTGTTGTAAAAGGCACCTTCCCTTTATTCAGACAGTCGGTTAGCCTTAAAAACAAAAaaaaaaaaa                                    ]




>consensus_6455#0
TCTCCCCAGCCTATGCTCCTCACCGGAGGAGGCTAAATATATTAACAGGACTTGTATAAA
GTTTTCATCTGCAAGTTGGAGTTGGAAGCCAATGTGAAGTTGAGAGGCTTAGACATACAG
AATAAAGTGGATGGGGAAGAGAGCTCTGCTGTCAGGTGAAGCCTGGGGAATCGTCTTCAC
TTTTTGATCCAGCAGCAAATGCATATGTTCCCGACTCAGCGAGGAGGTCTGCTTTGATCT
CCAGTCAAGAATTTGATTAAAAAACATACAACTAGAATCAGGTATCATTCTGCAGCACCC
TACATTGTGATTTGCCTGGCAAAGGATGTGTTCTCCAGGATAATGGTGGTTTAGCTTCTG
GTTTACTTTATTATTTGGTGGATTTTATCATCATAAATCAGTACAATGGGGAAACACTCA
GCTGAATCAGGTACTAGTATGCTCTTGCATGGAGATTTGGACATACAGATAGTGGAAGCA
AAATGTCTTCCCAATATGGATCTTATGACTGAAAGGATGCGAAAATGCTTCACTGGCTAC
GGCGCTTGTAGTACTGAGTGTGGGAAGTCTGATCCACATACAGACGTGAGGAAGATCATT
ACTAGTGATCCATATGTTTCGGTTTGCCTCTCAGGAGCAACAGTGGCACAAACTCGAGTC
ATTGCAAACTCAGAGAATCCTAAATGGGATGAACATTTTTATGTTCAGGTTGCCCATTCT
GTTAGCAGAGTTGAGTTTCACGTAAAAGACAATGATGTTTTTGGAGCAGAACTTATAGGC
GTGGCTTCAGTACCAGTTGAAAACATCACACCAGGTGATACCGTCAGTGGTTGGTTTCCA
ATATCTGGTCAGTATAGTAATCCTATGAAGGCATCTCCTGAACTTCATTTGTCTATCCAG
TACAAGCCAATTGAGCAGAATCCATTGTACAAAGATGGAGTTGGTTCTGACGGTTGTCAG
AGTATTGGTGTGCCAAATGCTTATTTTCCTCTTCGAAAGGGTGGTATGGTCACTCTATAT
CAAGATGCCCATATTCCTGATGACTTTTGTCCTAAAATTGAAATTGATGGTGGAAGAGTA
TACGAACAAAATAAATGTTGGGAAGACATTTGCCATGCAATTGCTGAGGCTCATCACCTT
ATTTATATAATTGGTTGGTCGTTGTATCACCCTGTCAAGCTGGTAAGGGAATCAACAAAA
CCTGTGCCCAATGGAAGCCCACCAACCCTTGGGGGGCTTTTGAAAACCAAGGTTCAGGAG
GGGGTCCGTGTTATTGTGTTACTTTGGGATGACAAAACATCACATGACAAATTTCTCTTG
AAAACGGATGGACTCATGCATACACATGACGAGGAAGCTCGGAAGTTTTTCAGGCATTCT
GGTGTCCATTGTGTGTTGGCTCCTCGCTACGCTAGCAACAAACTTAGCATTTTTAAGCAA
CAGGTTGTAGGAACTTTGTTTACGCACCATCAGAAATGTGTCATTGTTGACACCCAAGTC
ATAGGGAACAATAGAAAAATAACTGCTTTTATTGGTGGCCTAGACTTATGTGATGGCAGA
TATGATACACCTGAACACAGGCTCTTCAAGGATCTTGAGACCGTCTTCAAGGATGATTTC
CATAATCCCACATTCCAAGTTAATAAGTCTGGGCCTAGACAACCATGGCATGATTTACAT
TGCAAGATTGAGGGTCCAGCTGCCTATGATATACTTACAAACTTTGAACAGAGATGGAGA
AAATCTGCAAAATGGAAAGTCAGCGTTAGAAGAGCTGTAAGTTGGCACCATGATACCTTG
GTAAAAATAAACCGGATGTCGTGGATTGTCTCCCCCTCTGCAGATGAGTTAAATGCACGT
GTTTGTGAACAAGATGATCCAGAAAACTGGCATGTACAGATATTCCGGTCCATTGATTCA
GGATCAGTAAAAGGGTTCCCTAAACTTGTTCAGGAGGCTGAGTCACAGAATCTTGTCTGC
GCGAAAAATCTGCAGATAGACAAGAGCATACATAATGCATATGTGAAAGCTATCAGATCT
GCACAACACTATATCTACATTGAAAATCAATATTTTATTGGATCTTCATACTACTGGTCT
TCAAATAGAAGTGCAGGTGCAGAGAATTTGATACCGATCGAATTGGCCATAAAGATTGCA
AGAAGGATTAAAGCTAGGGAAAGATTTGCAGCTTACATTGTTATACCAATGTGGCCCGAG
GGTAATCCAACAACTGCTGCTATGCAGGAGATCATCTTTTGGCAGGGACAAACAATGTCC
ATGATGTACAAGATTGTCGCAGAAGCACTACAGAAGGAGGGGTTAGATGATACGCATCCA
CAGGATTACCTTAACTTCTACTGTCTTGGTAAGCGTGAAGTCTCAAATGACGTATCTACA
ACAAGCCAATCCAATGAGAATTCCCCACAGCGCCTGGTCCAAAAGTTCAAGCGATTCATG
ATCTACGTGCACTCCAAGGGGATGATTGTCGATGATGAGTATGTGCTCATAGGATCAGCC
AACATAAATCAGAGGTCCATGGATGGCTCAAGGGACACCGAGATCGCTATGGGCGCCTAC
CAGCCTCACTACAGCTGGGCAGGACGCAAGAAAGCTCCACGAGGACAGGTGTACGGGTAC
AGGATGTCGCTGTGGGCGGAGCACCTGGGTACAGTGGAGGAGTGCTTCCGTTGGCCTCAT
TCCGTGGAGTGCGTCCGGCAGGTGAATGAAATGGCAGAAGAGAACTGGGCGCGCTACGTA
TCACCGGAGATGGTGAACATGCGGGGGCACCTCATGAGGTACCCCATCAATGTTGAACGG
GATGGTAGGGTTGGTCCGGTGCATGGGTACGAGTGCTTCCCGGATGTCGGTGGCAAGGTG
CTCGGCACACACTCTTCTCTTCCAAATGCATTGACAACTTGAATTGGCTGGAGCATGAAC
GAGCTAGATGTGGCAACTACCACTAATACTTTGAAAAGAATCATTTTGGGGCGTGAAGCT
TTTTGTTTGTACATGAAAGAGAGACTGCTTGATACCAGTTCCACACATTGCTGTTATAGA
GTACTGCAGTTCGACTGCTGCATATGCAGTATGTATAATAGGATTTCAATTATAATCATC
TCTGGCTGGATGCAAATACATCTGTTCTTGCATTTAGTTTGTTGTAAAAGGCACCTTCCC
TTTATTCAGACAGTCGGTTAGCCTTAAAAACAAAATTCTTGGTGGCACATGATTCAAGAA
TTTATTGGAATGCCTCAGAA

consensusID : consensus_6455#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 670
fasta sequence 
                              [TTTAGCGACGAGACAAGGGGATGATGGTCGATGATGAGTATGTGCTCATAGGATCAGCCAACATAAATTAGAGGTCCATGGATGGCTCAAGGGACACCGAGATCGCTATGGGCGCCTACCAGCCTCACTANAGCTGGGCAGGACGCAAGAAAGCTCCACGAGGACAGGTGTACGGGTACAGGATGTCGCTGTGGGCGGAGCACCTGGGTACAGTGGAGGAGTGCTTCCGTTGGCCTCATTCCGTGGAGTGCGTCCGGCAGGTGAATGAAATGGCAGAAGAGAATTGGGCGCGCTACGTATCACCGGAGATGGTGAACATGCGGAGGCACCTCATGAGGTACCCCATCAATGTTGAACGGGATGGTAGGGTTGGTCCGGTGCATGGGTACGAGTGCTTCCCGGATGTCGGTGGCAAGGTGCTCGGCTCACACTTTTCTCTTCCAAATGCATTGACAACTTGAATTGGCTGGAGCATGAACGAGCTAGATGTGGCAACTACCACTAATACTTTGAAAAGAATCATTTTGGGGCGTGAAGCCTTTTGTTTGTACATGAAAGAGAGACTGCTTGATATCAGTTCCACACATTGCTGTTATAGAGTACTGCAGTTCGACTGCTGCATATGCAGTATGTATAATAGGATTTCAATTATAATCAAAAAAAAAAAAAA]

[-] EMBL CA763042             [TTTAGCGACGAGACAAGGGGATGATGGTCGATGATGAGTATGTGCTCATAGGATCAGCCAACATAAATTAGAGGTCCATGGATGGCTCAAGGGACACCGAGATCGCTATGGGCGCCTACCAGCCTCACTANAGCTGGGCAGGACGCAAGAAAGCTCCACGAGGACAGGTGTACGGGTACAGGATGTCGCTGTGGGCGGAGCACCTGGGTACAGTGGAGGAGTGCTTCCGTTGGCCTCATTCCGTGGAGTGCGTCCGGCAGGTGAATGAAATGGCAGAAGAGAATTGGGCGCGCTACGTATCACCGGAGATGGTGAACATGCGGAGGCACCTCATGAGGTACCCCATCAATGTTGAACGGGATGGTAGGGTTGGTCCGGTGCATGGGTACGAGTGCTTCCCGGATGTCGGTGGCAAGGTGCTCGGCTCACACTTTTCTCTTCCAAATGCATTGACAACTTGAATTGGCTGGAGCATGAACGAGCTAGATGTGGCAACTACCACTAATACTTTGAAAAGAATCATTTTGGGGCGTGAAGCCTTTTGTTTGTACATGAAAGAGAGACTGCTTGATATCAGTTCCACACATTGCTGTTATAGAGTACTGCAGTTCGACTGCTGCATATGCAGTATGTATAATAGGATTTCAATTATAATCAAAAAAAAAAAAAA]




>consensus_6455#1
TTTAGCGACGAGACAAGGGGATGATGGTCGATGATGAGTATGTGCTCATAGGATCAGCCA
ACATAAATTAGAGGTCCATGGATGGCTCAAGGGACACCGAGATCGCTATGGGCGCCTACC
AGCCTCACTANAGCTGGGCAGGACGCAAGAAAGCTCCACGAGGACAGGTGTACGGGTACA
GGATGTCGCTGTGGGCGGAGCACCTGGGTACAGTGGAGGAGTGCTTCCGTTGGCCTCATT
CCGTGGAGTGCGTCCGGCAGGTGAATGAAATGGCAGAAGAGAATTGGGCGCGCTACGTAT
CACCGGAGATGGTGAACATGCGGAGGCACCTCATGAGGTACCCCATCAATGTTGAACGGG
ATGGTAGGGTTGGTCCGGTGCATGGGTACGAGTGCTTCCCGGATGTCGGTGGCAAGGTGC
TCGGCTCACACTTTTCTCTTCCAAATGCATTGACAACTTGAATTGGCTGGAGCATGAACG
AGCTAGATGTGGCAACTACCACTAATACTTTGAAAAGAATCATTTTGGGGCGTGAAGCCT
TTTGTTTGTACATGAAAGAGAGACTGCTTGATATCAGTTCCACACATTGCTGTTATAGAG
TACTGCAGTTCGACTGCTGCATATGCAGTATGTATAATAGGATTTCAATTATAATCAAAA
AAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6455#0      TCTCCCCAGCCTATGCTCCTCACCGGAGGAGGCTAAATATATTAACAGGACTTGTATAAA 60
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      GTTTTCATCTGCAAGTTGGAGTTGGAAGCCAATGTGAAGTTGAGAGGCTTAGACATACAG 120
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      AATAAAGTGGATGGGGAAGAGAGCTCTGCTGTCAGGTGAAGCCTGGGGAATCGTCTTCAC 180
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      TTTTTGATCCAGCAGCAAATGCATATGTTCCCGACTCAGCGAGGAGGTCTGCTTTGATCT 240
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      CCAGTCAAGAATTTGATTAAAAAACATACAACTAGAATCAGGTATCATTCTGCAGCACCC 300
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      TACATTGTGATTTGCCTGGCAAAGGATGTGTTCTCCAGGATAATGGTGGTTTAGCTTCTG 360
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      GTTTACTTTATTATTTGGTGGATTTTATCATCATAAATCAGTACAATGGGGAAACACTCA 420
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      GCTGAATCAGGTACTAGTATGCTCTTGCATGGAGATTTGGACATACAGATAGTGGAAGCA 480
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      AAATGTCTTCCCAATATGGATCTTATGACTGAAAGGATGCGAAAATGCTTCACTGGCTAC 540
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      GGCGCTTGTAGTACTGAGTGTGGGAAGTCTGATCCACATACAGACGTGAGGAAGATCATT 600
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      ACTAGTGATCCATATGTTTCGGTTTGCCTCTCAGGAGCAACAGTGGCACAAACTCGAGTC 660
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      ATTGCAAACTCAGAGAATCCTAAATGGGATGAACATTTTTATGTTCAGGTTGCCCATTCT 720
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      GTTAGCAGAGTTGAGTTTCACGTAAAAGACAATGATGTTTTTGGAGCAGAACTTATAGGC 780
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      GTGGCTTCAGTACCAGTTGAAAACATCACACCAGGTGATACCGTCAGTGGTTGGTTTCCA 840
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      ATATCTGGTCAGTATAGTAATCCTATGAAGGCATCTCCTGAACTTCATTTGTCTATCCAG 900
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      TACAAGCCAATTGAGCAGAATCCATTGTACAAAGATGGAGTTGGTTCTGACGGTTGTCAG 960
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      AGTATTGGTGTGCCAAATGCTTATTTTCCTCTTCGAAAGGGTGGTATGGTCACTCTATAT 1020
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      CAAGATGCCCATATTCCTGATGACTTTTGTCCTAAAATTGAAATTGATGGTGGAAGAGTA 1080
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      TACGAACAAAATAAATGTTGGGAAGACATTTGCCATGCAATTGCTGAGGCTCATCACCTT 1140
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      ATTTATATAATTGGTTGGTCGTTGTATCACCCTGTCAAGCTGGTAAGGGAATCAACAAAA 1200
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      CCTGTGCCCAATGGAAGCCCACCAACCCTTGGGGGGCTTTTGAAAACCAAGGTTCAGGAG 1260
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      GGGGTCCGTGTTATTGTGTTACTTTGGGATGACAAAACATCACATGACAAATTTCTCTTG 1320
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      AAAACGGATGGACTCATGCATACACATGACGAGGAAGCTCGGAAGTTTTTCAGGCATTCT 1380
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      GGTGTCCATTGTGTGTTGGCTCCTCGCTACGCTAGCAACAAACTTAGCATTTTTAAGCAA 1440
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      CAGGTTGTAGGAACTTTGTTTACGCACCATCAGAAATGTGTCATTGTTGACACCCAAGTC 1500
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      ATAGGGAACAATAGAAAAATAACTGCTTTTATTGGTGGCCTAGACTTATGTGATGGCAGA 1560
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      TATGATACACCTGAACACAGGCTCTTCAAGGATCTTGAGACCGTCTTCAAGGATGATTTC 1620
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      CATAATCCCACATTCCAAGTTAATAAGTCTGGGCCTAGACAACCATGGCATGATTTACAT 1680
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      TGCAAGATTGAGGGTCCAGCTGCCTATGATATACTTACAAACTTTGAACAGAGATGGAGA 1740
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      AAATCTGCAAAATGGAAAGTCAGCGTTAGAAGAGCTGTAAGTTGGCACCATGATACCTTG 1800
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      GTAAAAATAAACCGGATGTCGTGGATTGTCTCCCCCTCTGCAGATGAGTTAAATGCACGT 1860
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      GTTTGTGAACAAGATGATCCAGAAAACTGGCATGTACAGATATTCCGGTCCATTGATTCA 1920
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      GGATCAGTAAAAGGGTTCCCTAAACTTGTTCAGGAGGCTGAGTCACAGAATCTTGTCTGC 1980
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      GCGAAAAATCTGCAGATAGACAAGAGCATACATAATGCATATGTGAAAGCTATCAGATCT 2040
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      GCACAACACTATATCTACATTGAAAATCAATATTTTATTGGATCTTCATACTACTGGTCT 2100
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      TCAAATAGAAGTGCAGGTGCAGAGAATTTGATACCGATCGAATTGGCCATAAAGATTGCA 2160
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      AGAAGGATTAAAGCTAGGGAAAGATTTGCAGCTTACATTGTTATACCAATGTGGCCCGAG 2220
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      GGTAATCCAACAACTGCTGCTATGCAGGAGATCATCTTTTGGCAGGGACAAACAATGTCC 2280
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      ATGATGTACAAGATTGTCGCAGAAGCACTACAGAAGGAGGGGTTAGATGATACGCATCCA 2340
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      CAGGATTACCTTAACTTCTACTGTCTTGGTAAGCGTGAAGTCTCAAATGACGTATCTACA 2400
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      ACAAGCCAATCCAATGAGAATTCCCCACAGCGCCTGGTCCAAAAGTTCAAGCGATTCATG 2460
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      ATCTACGTGCACTCCAAGGGGATGATTGTCGATGATGAGTATGTGCTCATAGGATCAGCC 2520
consensus_6455#1      -TTTAGCGACGAGACAAGGGGATGATGGTCGATGATGAGTATGTGCTCATAGGATCAGCC 59
                       * **    *    ************ *********************************

consensus_6455#0      AACATAAATCAGAGGTCCATGGATGGCTCAAGGGACACCGAGATCGCTATGGGCGCCTAC 2580
consensus_6455#1      AACATAAATTAGAGGTCCATGGATGGCTCAAGGGACACCGAGATCGCTATGGGCGCCTAC 119
                      ********* **************************************************

consensus_6455#0      CAGCCTCACTACAGCTGGGCAGGACGCAAGAAAGCTCCACGAGGACAGGTGTACGGGTAC 2640
consensus_6455#1      CAGCCTCACTANAGCTGGGCAGGACGCAAGAAAGCTCCACGAGGACAGGTGTACGGGTAC 179
                      *********** ************************************************

consensus_6455#0      AGGATGTCGCTGTGGGCGGAGCACCTGGGTACAGTGGAGGAGTGCTTCCGTTGGCCTCAT 2700
consensus_6455#1      AGGATGTCGCTGTGGGCGGAGCACCTGGGTACAGTGGAGGAGTGCTTCCGTTGGCCTCAT 239
                      ************************************************************

consensus_6455#0      TCCGTGGAGTGCGTCCGGCAGGTGAATGAAATGGCAGAAGAGAACTGGGCGCGCTACGTA 2760
consensus_6455#1      TCCGTGGAGTGCGTCCGGCAGGTGAATGAAATGGCAGAAGAGAATTGGGCGCGCTACGTA 299
                      ******************************************** ***************

consensus_6455#0      TCACCGGAGATGGTGAACATGCGGGGGCACCTCATGAGGTACCCCATCAATGTTGAACGG 2820
consensus_6455#1      TCACCGGAGATGGTGAACATGCGGAGGCACCTCATGAGGTACCCCATCAATGTTGAACGG 359
                      ************************ ***********************************

consensus_6455#0      GATGGTAGGGTTGGTCCGGTGCATGGGTACGAGTGCTTCCCGGATGTCGGTGGCAAGGTG 2880
consensus_6455#1      GATGGTAGGGTTGGTCCGGTGCATGGGTACGAGTGCTTCCCGGATGTCGGTGGCAAGGTG 419
                      ************************************************************

consensus_6455#0      CTCGGCACACACTCTTCTCTTCCAAATGCATTGACAACTTGAATTGGCTGGAGCATGAAC 2940
consensus_6455#1      CTCGGCTCACACTTTTCTCTTCCAAATGCATTGACAACTTGAATTGGCTGGAGCATGAAC 479
                      ****** ****** **********************************************

consensus_6455#0      GAGCTAGATGTGGCAACTACCACTAATACTTTGAAAAGAATCATTTTGGGGCGTGAAGCT 3000
consensus_6455#1      GAGCTAGATGTGGCAACTACCACTAATACTTTGAAAAGAATCATTTTGGGGCGTGAAGCC 539
                      *********************************************************** 

consensus_6455#0      TTTTGTTTGTACATGAAAGAGAGACTGCTTGATACCAGTTCCACACATTGCTGTTATAGA 3060
consensus_6455#1      TTTTGTTTGTACATGAAAGAGAGACTGCTTGATATCAGTTCCACACATTGCTGTTATAGA 599
                      ********************************** *************************

consensus_6455#0      GTACTGCAGTTCGACTGCTGCATATGCAGTATGTATAATAGGATTTCAATTATAATCATC 3120
consensus_6455#1      GTACTGCAGTTCGACTGCTGCATATGCAGTATGTATAATAGGATTTCAATTATAATCA-- 657
                      **********************************************************  

consensus_6455#0      TCTGGCTGGATGCAAATACATCTGTTCTTGCATTTAGTTTGTTGTAAAAGGCACCTTCCC 3180
consensus_6455#1      ---AAAAAAAAAAAAA-------------------------------------------- 670
                               *   ***                                            

consensus_6455#0      TTTATTCAGACAGTCGGTTAGCCTTAAAAACAAAATTCTTGGTGGCACATGATTCAAGAA 3240
consensus_6455#1      ------------------------------------------------------------
                                                                                  

consensus_6455#0      TTTATTGGAATGCCTCAGAA 3260
consensus_6455#1      --------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)