cluster # 6458

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Oryza sativa
cluster # 6458 cluster # 6458 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6458#0 length = 887 sequences # 4
consensusID : consensus_6458#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 887
fasta sequence
                              [AAGGTTGAACTTCCACACTGGCAATGTTGGGGATCATATAGCTCTACTCAATGTTTACAACTCATGGAAAGAAACAGACTATTCAACACAGTGGTGCTATGAAAACTATATACAGGTCCGCAGCATGAAGAGAGCAAGAGATATTCGTGATCAACTGGAGGGACTTCTAGAAAGAGTTGAGATTGAGATTTCTTCAAATGCCAGCGATTTGGATGCTATTAAAAAGGCTATAACATCAGGTTTCTTCCATCATTCTTCACGGTTGCAGAAGAATGGTTCATATAGAACTGTTAAGAACCCTCAAACTGTATTTATTCATCCTAGTTCTGGATTAGCACAGGTACTTCCTCGATGGGTAATATACCATGAATTAGTCCTTACAACAAAAGAATATATGCGTCAGGTAACGGAACTGAAGCCCGACTGGCTGGTAGAAATAGCGCCACACTATTATCAACTAAAAGACGTTGACGACACTGGGACTAAGAAGCTGCCTAAGGGCCAAGGACGAGCTGCATTGTAACCACCCCCTGTGATCGAAGGTTTTTATCTTAAAAGATTCAGAGCCTAGATGGCATAGAGTGAAAATGTACATAGCTCCTCTTTTAGTTCTTAGGTATTGATCCCTGCCTCATCTCGATTAGCAGTCAATTGTCGATTACGCGGGCATATATTTCGAGAGACGTGCTGGCATGTACACGGCTGTAATTTGTATCAGCTTTGTGTTGATGTAGAGATGTAGATACTGCACAACCTGATGCCTACTAGGACTAAAGTTCTGCATGTTTACCTATGCTTGGAAAATAACGAAGAGGATATGCTGCACCAAAANNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNTCGAAAC]

[+] EMBL CA754004             [AAGGTTGAACTTCCACACTGGCAATGTTGGGGATCATATAGCTCTACTCAATGTTTACAACTCATGGAAAGAAACAGACTATTCAACACAGTGGTGCTATGAAAACTATATACAGGTCCGCAGCATGAAGAGAGCAAGAGATATTCGTGATCAACTGGAGGGACTTCTAGAAAGAGTTGAGATTGAGATTTCTTCAAATGCCAGCGATTTGGATGCTATTAAAAAGGCTATAACATCAGGTTTCTTCCATCATTCTTCACGGTTGCAGAAGAATGGTTCATATAGAACTGTTAAGAACCCTCAAACTGTATTTATTCATCCTAGTTCTGGATTAGCACAGGTACTTCCTCGATGGGTAATATACCATGAATTAGTCCTTACAACAAAAGAATATATGCGTCAGGTAACGGAACTGAAGCCCGACTGGCTGGTAGAAATAGCGCCACACTATTATCAACTAANAGACGTTGACGACACTGGGACTAAGAAGCTGCCTAAGGGCCAAGGACGAGCTGCATTGTAACCACCCCCTGTGATCGAAGGTTTTTATCTTAAAAGATTCAGAGCCTAGATGGCATAGAGTGAAAATGTACATAGCTCCTCTTTTAGTTCTTAGGTATTGATCCCTGCCTCATCTCGATTAGCAGTCAATTGTCGATTACGCGGGCATATATTTCGAGAGACGTGCTGGCATGTACACGGCTGTAATTTGTATCAGCTTTGTGTTGATGTAGAGATGTAGATACTGCACAACCTGATGCCTACTAGGACTAAAGTTCTGCATGTTTACCTATGCTTGGAAAATAACGAAGAGGATATGCTGCACCNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNTCGAAAC]
[-] EMBL CA763085             [                                                                                                                                             TATTCGTGATCAGCTGGAGGGACTTCTAGAAAGAGTTGAGATTGAGATTTCTTCAAATGCCAGCGATCTGGATGCTACTAAAAAGGCTATACCATCAGGTTTCTTCCATCATTCTTCACGGTGNCAGAAGAATGGTTCATATAGAACTGTTAAGAACCCTCAAACTGTATTTATTCATCCTAGTTCTGGATTAGCACAGGTACTTCCTCGATGGGTAATATACCATGAATTAGTCCTTACAACAAAAGAATATATGCGTCAGGTAACGGAACTGAAGCCCGACTGGCTGGTAGAAATAGCGCCACACTATTATCAACTAAAAGACGTTGACGACACTGGGACTAAGAAGCTGCCTAAGGGCCAAGGACGAGCTGCATTGTAACCACCCCCTGTGATCGAAGGTTTTTATCTTAAAAGATTCAGAGCCTAGATGGCATAGAGTGAAAATGTACATAGCTCCTCTTTTAGTTCTTAGGTATTGATCCCTGCCTCATCTCGATTAGCAGTCAATTGTCGATTACGCGGGCATATATTTCGAGAGACGTGCTGGCATGTACACGGCTGTAATTTGTATCAGCTTTGTGTTGATGTAGAGATGTAGATACTGCACAACCTGATGCCTACTAGGACTAAAGTTCTGCATGTTTACCTATGCTTGGAAAATAACGAAGAGGATATGCTGCAAAAAAAaaa                                                     ]
[+] EMBL BM419792             [                                                                                                                                                                                                                                                                                                                                      CTGGATTAGCACAGGTACTTCCTCGATGGGTAATATACCATGAATTAGTCCTTACAAC AAAGAATATATGCGTCAGGTAACGGAACTGAAGCCCGACTGGCTGGTAGAAATAGCGCCACACTATTATCAACTAAAAGACGTTGACGACACTGGGACTAAGAAGCTGCCTAAGGGCCAAGGACGAGCTGCATTGTAACCACCCCCTGTGATCGAAGGTTTTTATCTTAAAAGATTCAGAGCCTAGATGGCATAGAGTGAAAATGTACATAGCTCCTCTTTTAGTTCTTAGGTATTGATCCCTGCCTCATCTCGATTAGCAGTCAATTGTCGATTACGCGGGCATATATTTCGAGAGACGTGCTGGCATGTACACGGCTGTAATTTGTATCAGCTTTGTGTTGATGTAGAGATGTAGATACTGCACAACCTGATGCCTACTAGGACTAAAGTTCTGCATGTTTACCTATGCTTGGAAAATAACGAAGAGGATATGCTGCACCAAAA                                                        ]
[+] EMBL CF330163             [                                                                                                                                                                                                                                                                                                                                                                                                AAAAGAATCTATGCGTCAGGTAACGGAACTGAAGCCCGACTGGCTGGTAGAAATAGCGCCACACTATTATCAACTAAAAGACGTTGACGACACTGGGACTAAGAAGCTGCCTAAGGGCCAAGGACGAGCTGCATTGTAACCACCCCCTGTGATCGAAGGTTTTTATCTTAAAAGATTCATATCCTAGATGGCATAGAGTGAAAATGTACATAGCTCCTCTTTTAGTTCTTAGGTATTGATCCCTGCCTCATCTCGATTAGCAGTCAATTGTCGATTACGCGGGCATATATTTCGAGAGACGTGCTGGCATGTACACGGCTGTAATTTGTATCAGCTTTGTGTTGATGTAGAGATGTAGATACTGCACAACCTGATGCCTACTAGGACTAAAGTTCTGCATGTTTACCTATGCTTGGAAAATAACGAAGAGGATATGCTGCACCAA                                                          ]




>consensus_6458#0
AAGGTTGAACTTCCACACTGGCAATGTTGGGGATCATATAGCTCTACTCAATGTTTACAA
CTCATGGAAAGAAACAGACTATTCAACACAGTGGTGCTATGAAAACTATATACAGGTCCG
CAGCATGAAGAGAGCAAGAGATATTCGTGATCAACTGGAGGGACTTCTAGAAAGAGTTGA
GATTGAGATTTCTTCAAATGCCAGCGATTTGGATGCTATTAAAAAGGCTATAACATCAGG
TTTCTTCCATCATTCTTCACGGTTGCAGAAGAATGGTTCATATAGAACTGTTAAGAACCC
TCAAACTGTATTTATTCATCCTAGTTCTGGATTAGCACAGGTACTTCCTCGATGGGTAAT
ATACCATGAATTAGTCCTTACAACAAAAGAATATATGCGTCAGGTAACGGAACTGAAGCC
CGACTGGCTGGTAGAAATAGCGCCACACTATTATCAACTAAAAGACGTTGACGACACTGG
GACTAAGAAGCTGCCTAAGGGCCAAGGACGAGCTGCATTGTAACCACCCCCTGTGATCGA
AGGTTTTTATCTTAAAAGATTCAGAGCCTAGATGGCATAGAGTGAAAATGTACATAGCTC
CTCTTTTAGTTCTTAGGTATTGATCCCTGCCTCATCTCGATTAGCAGTCAATTGTCGATT
ACGCGGGCATATATTTCGAGAGACGTGCTGGCATGTACACGGCTGTAATTTGTATCAGCT
TTGTGTTGATGTAGAGATGTAGATACTGCACAACCTGATGCCTACTAGGACTAAAGTTCT
GCATGTTTACCTATGCTTGGAAAATAACGAAGAGGATATGCTGCACCAAAANNNANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNTCGAAAC
clustalw multiple alignements is not computed in this case