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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6463 cluster # 6463       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6463#0 length = 594 sequences # 4  

consensusID : consensus_6463#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 594
fasta sequence
                              [ATCGGGGAAAGAGGAGGCGATCTCGCCGCGCCGTCGAGCTGGGGATTTCTCCGCGCCGTCGCGCGGCGCCGAAGCGACGAGTAGGCGGTTCACTGGTGAGGAGGTCTTCAT-CGACGGAGATGTTGCATTTGCTAGATTTGTGGTTTTGTTTTTGTGTTTGAAGCGCCGATCTGGTGATTTCTTCTAAGGTTGATGTGATGGAAAAAGTTGGAAATTTGGAGGAAAAGTTTGGAACTAAACGCAG-CCGAGCCAGGAGTTCAATCTGGTTACTGCAGTTAGAAT-CAAA-TGAAGCAATCCAGT-GAGCAAAGAGGAGCTAGCTCAATGT-CAGGAGGAGCTTGGC-TGTTTGAAACAATCGGGGGATGCAAGGGGTGGATTCATAAGGTCGAGTTGTTTCAAATCTGTTGACAAAAAAATGCCGCACAAAATCGTTAGGTGAAATTGATGTTCTGATTAATTTTCAAGTTCCCATATCAGTTAGTTTTGAATTGGAGAAATTCAGAAATTTAAAGTTACTTCATGTTTGATATCTGAATTATCACTGCAGTACTCTAGCTCTGAATCTTGAAGCTGTCATGTTGTCTAAAATTTAAAAAA]

[+] EMBL AU029909             [ATCGGGGAAAGAGGAGGCGATCTCGCCGCGCCGTCGAGCTGGGGATTTCTCCGCGCCGTCGCGCGGCGCCGAAGCGACGAGTAGGCGGTTCACTGGTGAGGAGGTCTTCAT CGACGGAGATGTTGCATTTGCTAGATTTGTGGTTTTGTTTTTGTGTTTGAAGCGCCGATCTGGTGATTTCTTCTAAGGTTGATGTGATGGAAAAAGTTGGAAATTTGGAGGAAAAGTTTGGAACTAAACGCAG CCGAGCCAGGAGTTCAATCTGGTTACTGCAGTTAGAATCCAAATTGAAGCAATCCAGTGGACCAAAGAGGAGCTAACNCCATGTCCAGGAGGACCTTTGCTTGTTT NAACATCCGGGGGTTCCA                                                                                                                                                                                                                                      ]
[+] EMBL AU081339             [                                                                                                   GGAGGTCTTCATCCGACGGAGATGTTGCATTTGCTAGATTTGTGGTTTTGTTTTTGTGTTTGAAGCGCCGATCTGGTGATTTCTTCTAAGGTTGATGTGATGGAAAAAGTTGGAAATTTGGAGGAAAAGTTTGGAACTAAACGCAGCCCGAGCCAGGAGTTCAATCTGGTTACTGCAGTTAGAAT CAAA TGAAGCAATCCAGT GAACAAAGAGGAGCTAGCTCAATGT CAGGAGGAGCTTGGC TGTTTGAAACAATCGGGGGATGCAAGGGGTGGATTCATAAGGTCGAGTTGTTTCAAATCTGTTGACAAAAAAATGCCGCACAAAATCGTTAGGTGAAATTGATGTTCTGATTAATTTTCAAGTTCCCATATCAGTTAGTTTTGAATTGGAGAAATTCAGAAATTTAAAGTTACTTCATGTTTGATATCTGAATTAaaaaaa                                                     ]
[+] EMBL CF330362             [                                                                                                                                                                                          AAGGTTGATGTGATGGAAAAAGTTGGAAATTTGGAGGAAAAGTTTGGAACTAAACGCAG CCGAGCCGGGAGTTCAATCTGGTTACTGCAGTTAGAAT CAAA TGAAGCAATCCAGT GAGCAAAGAGGAGCTAGCTCAATGT CAGGAGGAGCTTGGC TGTTTGAAACAATCGGGGGATGCAAGGGGTGGATTCATAAGGTCGAGTTGTTTCAAATCTGTTGACAAAAAAATGCCGCACAAAATCGTTAGGTGAAATTGATGTTCTGATTAATTTTCAAGTTCCCATATCAGTTAGTTTTGAATTGGAGAAATTCAGAAATTTAAAGTTACTTCATGTTTGATATCTGAATTATCACTGCAGTACTCTAGCTCTGAATCTTGAAGCTGTCATGTTGTCTAAAATTTAAAAA ]
[-] EMBL CF330363             [                                                                                                                                                                                           AGGTTGATGTGATGGAAAAAGTTGGAAATTTGGAGGAAAAGTTTGGAACTAAACGCAG CCGAGCCGGGAGTTCAATCTGGTTACTGCAGTTAGAAT CAAA TGAAGCAATCCAGT GAGCAAAGAGGAGCTAGCTCAATGT CAGGAGGAGCTTGGC TGTTTGAAACAATCGGGGGATGCAAGGGGTGGATTCATAAGGTCGAGTTGTTTCAAATCTGTTGACAAAAAAATGCCGCACAAAATCGTTAGGTGAAAAAAATGTTCTGATTAATTTTCAAGTTCCCATATCAGTTAGTTTTGAATTGGAGAAATTCAGAAATTTAAAGTTACTTCATGTTTGATATCTGAATTATCACTGCAGTACTCTAGCTCTGAATCTTGAAGCTGTCATGTTGTCTAAAATTTAAAAAA]


>consensus_6463#0 ATCGGGGAAAGAGGAGGCGATCTCGCCGCGCCGTCGAGCTGGGGATTTCTCCGCGCCGTC GCGCGGCGCCGAAGCGACGAGTAGGCGGTTCACTGGTGAGGAGGTCTTCATCGACGGAGA TGTTGCATTTGCTAGATTTGTGGTTTTGTTTTTGTGTTTGAAGCGCCGATCTGGTGATTT CTTCTAAGGTTGATGTGATGGAAAAAGTTGGAAATTTGGAGGAAAAGTTTGGAACTAAAC GCAGCCGAGCCAGGAGTTCAATCTGGTTACTGCAGTTAGAATCAAATGAAGCAATCCAGT GAGCAAAGAGGAGCTAGCTCAATGTCAGGAGGAGCTTGGCTGTTTGAAACAATCGGGGGA TGCAAGGGGTGGATTCATAAGGTCGAGTTGTTTCAAATCTGTTGACAAAAAAATGCCGCA CAAAATCGTTAGGTGAAATTGATGTTCTGATTAATTTTCAAGTTCCCATATCAGTTAGTT TTGAATTGGAGAAATTCAGAAATTTAAAGTTACTTCATGTTTGATATCTGAATTATCACT GCAGTACTCTAGCTCTGAATCTTGAAGCTGTCATGTTGTCTAAAATTTAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)