These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6463#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 594 fasta sequence [ATCGGGGAAAGAGGAGGCGATCTCGCCGCGCCGTCGAGCTGGGGATTTCTCCGCGCCGTCGCGCGGCGCCGAAGCGACGAGTAGGCGGTTCACTGGTGAGGAGGTCTTCAT-CGACGGAGATGTTGCATTTGCTAGATTTGTGGTTTTGTTTTTGTGTTTGAAGCGCCGATCTGGTGATTTCTTCTAAGGTTGATGTGATGGAAAAAGTTGGAAATTTGGAGGAAAAGTTTGGAACTAAACGCAG-CCGAGCCAGGAGTTCAATCTGGTTACTGCAGTTAGAAT-CAAA-TGAAGCAATCCAGT-GAGCAAAGAGGAGCTAGCTCAATGT-CAGGAGGAGCTTGGC-TGTTTGAAACAATCGGGGGATGCAAGGGGTGGATTCATAAGGTCGAGTTGTTTCAAATCTGTTGACAAAAAAATGCCGCACAAAATCGTTAGGTGAAATTGATGTTCTGATTAATTTTCAAGTTCCCATATCAGTTAGTTTTGAATTGGAGAAATTCAGAAATTTAAAGTTACTTCATGTTTGATATCTGAATTATCACTGCAGTACTCTAGCTCTGAATCTTGAAGCTGTCATGTTGTCTAAAATTTAAAAAA] [+] EMBL AU029909 [ATCGGGGAAAGAGGAGGCGATCTCGCCGCGCCGTCGAGCTGGGGATTTCTCCGCGCCGTCGCGCGGCGCCGAAGCGACGAGTAGGCGGTTCACTGGTGAGGAGGTCTTCAT CGACGGAGATGTTGCATTTGCTAGATTTGTGGTTTTGTTTTTGTGTTTGAAGCGCCGATCTGGTGATTTCTTCTAAGGTTGATGTGATGGAAAAAGTTGGAAATTTGGAGGAAAAGTTTGGAACTAAACGCAG CCGAGCCAGGAGTTCAATCTGGTTACTGCAGTTAGAATCCAAATTGAAGCAATCCAGTGGACCAAAGAGGAGCTAACNCCATGTCCAGGAGGACCTTTGCTTGTTT NAACATCCGGGGGTTCCA ] [+] EMBL AU081339 [ GGAGGTCTTCATCCGACGGAGATGTTGCATTTGCTAGATTTGTGGTTTTGTTTTTGTGTTTGAAGCGCCGATCTGGTGATTTCTTCTAAGGTTGATGTGATGGAAAAAGTTGGAAATTTGGAGGAAAAGTTTGGAACTAAACGCAGCCCGAGCCAGGAGTTCAATCTGGTTACTGCAGTTAGAAT CAAA TGAAGCAATCCAGT GAACAAAGAGGAGCTAGCTCAATGT CAGGAGGAGCTTGGC TGTTTGAAACAATCGGGGGATGCAAGGGGTGGATTCATAAGGTCGAGTTGTTTCAAATCTGTTGACAAAAAAATGCCGCACAAAATCGTTAGGTGAAATTGATGTTCTGATTAATTTTCAAGTTCCCATATCAGTTAGTTTTGAATTGGAGAAATTCAGAAATTTAAAGTTACTTCATGTTTGATATCTGAATTAaaaaaa ] [+] EMBL CF330362 [ AAGGTTGATGTGATGGAAAAAGTTGGAAATTTGGAGGAAAAGTTTGGAACTAAACGCAG CCGAGCCGGGAGTTCAATCTGGTTACTGCAGTTAGAAT CAAA TGAAGCAATCCAGT GAGCAAAGAGGAGCTAGCTCAATGT CAGGAGGAGCTTGGC TGTTTGAAACAATCGGGGGATGCAAGGGGTGGATTCATAAGGTCGAGTTGTTTCAAATCTGTTGACAAAAAAATGCCGCACAAAATCGTTAGGTGAAATTGATGTTCTGATTAATTTTCAAGTTCCCATATCAGTTAGTTTTGAATTGGAGAAATTCAGAAATTTAAAGTTACTTCATGTTTGATATCTGAATTATCACTGCAGTACTCTAGCTCTGAATCTTGAAGCTGTCATGTTGTCTAAAATTTAAAAA ] [-] EMBL CF330363 [ AGGTTGATGTGATGGAAAAAGTTGGAAATTTGGAGGAAAAGTTTGGAACTAAACGCAG CCGAGCCGGGAGTTCAATCTGGTTACTGCAGTTAGAAT CAAA TGAAGCAATCCAGT GAGCAAAGAGGAGCTAGCTCAATGT CAGGAGGAGCTTGGC TGTTTGAAACAATCGGGGGATGCAAGGGGTGGATTCATAAGGTCGAGTTGTTTCAAATCTGTTGACAAAAAAATGCCGCACAAAATCGTTAGGTGAAAAAAATGTTCTGATTAATTTTCAAGTTCCCATATCAGTTAGTTTTGAATTGGAGAAATTCAGAAATTTAAAGTTACTTCATGTTTGATATCTGAATTATCACTGCAGTACTCTAGCTCTGAATCTTGAAGCTGTCATGTTGTCTAAAATTTAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||