cluster # 6470

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Oryza sativa
cluster # 6470 cluster # 6470 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6470#0 length = 1235 sequences # 4
consensusID : consensus_6470#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1235
fasta sequence
                              [TCCACAGCCATGGCGACCTCCTCCGCCGCCGCCGCGCTCCGGCTTCCCGCCTCCCAGCTCCCCCTCTCCGCGCGCCCCTCCTCCTCCTCCACCCTCCGCTTCCCTCCCCGCCGCCCCGCGCGCCGGGGAGGCCTCGCGGTCTCCGCCTTCACGAAGCTCTCCGAGGCGTCCCCCGTCGCCATCCCACCGGAGCCCGCGCAGCCGTTGCCGGACGAGGAAGCCCTGCCCCCCAAGCCCGGGGTCTACGGGGTGTACGACCCCGCCGGCGAGCTGCAGTTCGTCGGGATATCGCGCAACGTCAGGGCCAGCGTCGAGGGCCACCGCCGGAAGGTGCCCGCCGACCTTTGCGGCTCCGTCAAGGTTTCAATAGCAGATGAGGAGACACCAGATCGAACTGTCCTGACTAATGCCTGGAAGTCATGGTTGGAAGAACATATNACAGCCACCGGAAAGGCACCGCCGGGGAATGTTGCTGGAAACCACACCTGGGTTGGACCTCCACAGAGGCCTCCGGACTTGCGATTGACACCTGGNCGNCATGTTCAGCTAACCGTGCCACTGGGACAATTGATTGATCGGNTAGTGAAGGAC-ACAAAGTGGTCGCGTTCATCAAAGGATCAAGGAGCGCACCCCAGTGCGGTTTCTCGCAAAGGGTTGTGGGAATCTTGGAATCACATGGAGTAGA-TTTTGTAACCGTTGATGTTCTTGA-CGAGGAGCACAACCATGGGTTGCGAGAAACCCTGAAGACATACAGCAACTGGCCGACTTTCCCACAGGTTTTTGTTGGAGGGGAGCTTGTGGGTGGATGTGACATTGTTTCATCCATGGCCGAGAAGGGGGAGCTTGCTGCCCTTTTTAAGAAATAGGACTCACTCTGGAGTGCTTAAGTAATGCCTTGAACTACTGTTACCTGATGCGAATCGCTAGCTTGGCAGCTACCATCATTTTACATGCTGCAGTAATGCTTCATTTACTGCAAGGCACATTGGTTTGGATCAGTTATACATATACACGTTTCTTTGATTCAGATGAGGAAATGCTGTAAATTGTAATATGGTGGTTGCTTTTTGAGAGAGGATTTGCAAGGG-CAGAGGGCTGTCAGTATTTTGTGGTCGTTTCAGATTTTGTACGTGAAAATTTGTATCGTTATGAGAAGTGAAAAATTGTATCGTTATGAGAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CA756328             [TCCACAGCCATGGCGACCTCCTCCGCCGCCGCCGCGCTCCGGCTTCCCGCCTCCCAGCTCCCCCTCTCCGCGCGCCCCTCCTCCTCCTCCACCCTCCGCTTCCCTCCCCGCCGCCCCGCGCGCCGGGGAGGCCTCGCGGTCTCCGCCTTCACGAAGCTCTCCGAGGCGTCCCCCGTCGCCATCCCACCGGAGCCCGCGCAGCCGTTGCCGGACGAGGAAGCCCTGCCCCCCAAGCCCGGGGTCTACGGGGTGTACGACCCCGCCGGCGAGCTGCAGTTCGTCGGGATATCGCGCAACGTCAGGGCCAGCGTCGAGGGCCACCGCCGGAAGGTGCCCGCCGACCTTTGCGGCTCCGTCAAGGTTTCAATAGCAGATGAGGAGACACCAGATCGAACTGTCCTGACTAATGCCTGGAAGTCATGGTTGGAAGAACATATNACAGCCACCGGAAAGGCACCGCCGGGGAATGTTGCTGGAAACCACACCTGGGTTGGACCTCCACAGAGGCCTCCGGACTTGCGATTGACACCTGGNCGNCATGTTCAGCTAACCGTGCCACTGGGACAATTGATTGATCGGNTAGTGAAGGAC ACAAAGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK060940             [            GCGACCTCCTCCGCCGCCGCCGCGCTCCGGCTTCCCGCCTCCCAGCTCCCCCTCTCCGCGCGCCCCTCCTCCTCCTCCACCCTCCGCTTCCCTCCCCGCCGCCCCGCGCGCCGGGGAGGCCTCGCGGTCTCCGCCTTCACGAAGCTCTCCGAGGCGTCCCCCGTCGCCATCCCACCGGAGCCCGCGCAGCCGTTGCCGGACGAGGAAGCCCTGCCCCCCAAGCCCGGGGTCTACGGGGTGTACGACCCCGCCGGCGAGCTGCAGTTCGTCGGGATATCGCGCAACGTCAGGGCCAGCGTCGAGGGCCACCGCCGGAAGGTGCCCGCCGACCTTTGCGGCTCCGTCAAGGTTTCAATAGCAGATGAGGAGACACCAGATCGAACTGTCCTGACTAATGCCTGGAAGTCATGGTTGGAAGAACATATAACAGCCACCGGAAAGGCACCGCCGGGGAATGTTGCTGGAAACCACATCTGGGTTGGACCTCCACAGAGGCCTCCGGACTTGCGATTGACACCTGGCCGCCATGTTCAGCTAACCGTGCCACTGGAACAATTGATTGATCGGTTAGTGAAGGACAACAAAGTGGTCGCGTTCATCAAAGGATCAAGGAGCGCACCCCAGTGCGGTTTCTCGCAAAGGGTTGTGGGAATCTTGGAATCACATGGAGTAGA TTTTGTAACCGTTGATGTTCTTGA CGAGGAGCACAACCATGGGTTGCGAGAAACCCTGAAGACATACAGCAACTGGCCGACTTTCCCACAGGTTTTTGTTGGAGGGGAGCTTGTGGGTGGATGTGACATTGTTTCATCCATGGCCGAGAAGGGGGAGCTTGCTGCCCTTTTTAAGAAATAGGACTCACTCTGGAGTGCTTAAGTAATGCCTTGAACTACTGTTACCTGATGCGAATCGCTAGCTTGGCAGCTACCATCATTTTACATGCTGCAGTAATGCTTCATTTACTGCAAGGCACATTGGTTTGGATCAGTTATACATATACACGTTTCTTTGATTCAGATGAGGAAATGCTGTAAATTGTAATATGGTGGTTGCTTTTTGAGAGAGGATTTGCAAGGG CAGAGGGCTGTCAGTATTTTGTGGTCGTTTCAGATTTTGTACGTGAAAATTTGTATCGTTATGAGAAGTGAAAAATTGTA                                                                   ]
[+] EMBL BI805114             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           aaGGTTGTGGGAATCTTGGAATCACATGGAGTAGATTTTTGTAACCGTTGATGTTCTTGAGCGAGGAGCACAACCATGGGTTGCGAGAAACCCTGAAGACATACAGCAACT GCCGACTTTCCCACAGGTTTTTGTTGGAGGGGAGCTTGTGGGTGGATGTGACATTGTTTCATCCATGGCCGAGAAGGGGGAGCTTGCTGCCCTTTTTAAGAAATAGGACTCACTCTGGAGTGCTTAAGTAATGCCTTGAACTACTGTTACCTGATGCGAATCGCTAGCTTGGCAGCTACCATCATTTTACATGCTGCAGTAATGCTTCATTTACTGCAAGGCACATTGGTTTGGATCAGTTATACATATACACGTTTCTTTGATTCAGATGAGGAAATGCTGTAAATTGTAATATGGTGGTTGCTTTTTGAGAGAGGATTTGCAAGGGCCAGAGGGCTGTCAGTATTTTGTGGTCGTTTCAGATTTTGTACGTGAAAATTTGTATCGTTATGAGAAaaa                                                                             ]
[+] EMBL CF330422             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTTGTGGTCGTCTCAGATTTTGTACGTGAAAATTTGTATCGTTATGAGAAGTGAAAAATTGTATCGTTATGAGAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_6470#0
TCCACAGCCATGGCGACCTCCTCCGCCGCCGCCGCGCTCCGGCTTCCCGCCTCCCAGCTC
CCCCTCTCCGCGCGCCCCTCCTCCTCCTCCACCCTCCGCTTCCCTCCCCGCCGCCCCGCG
CGCCGGGGAGGCCTCGCGGTCTCCGCCTTCACGAAGCTCTCCGAGGCGTCCCCCGTCGCC
ATCCCACCGGAGCCCGCGCAGCCGTTGCCGGACGAGGAAGCCCTGCCCCCCAAGCCCGGG
GTCTACGGGGTGTACGACCCCGCCGGCGAGCTGCAGTTCGTCGGGATATCGCGCAACGTC
AGGGCCAGCGTCGAGGGCCACCGCCGGAAGGTGCCCGCCGACCTTTGCGGCTCCGTCAAG
GTTTCAATAGCAGATGAGGAGACACCAGATCGAACTGTCCTGACTAATGCCTGGAAGTCA
TGGTTGGAAGAACATATNACAGCCACCGGAAAGGCACCGCCGGGGAATGTTGCTGGAAAC
CACACCTGGGTTGGACCTCCACAGAGGCCTCCGGACTTGCGATTGACACCTGGNCGNCAT
GTTCAGCTAACCGTGCCACTGGGACAATTGATTGATCGGNTAGTGAAGGACACAAAGTGG
TCGCGTTCATCAAAGGATCAAGGAGCGCACCCCAGTGCGGTTTCTCGCAAAGGGTTGTGG
GAATCTTGGAATCACATGGAGTAGATTTTGTAACCGTTGATGTTCTTGACGAGGAGCACA
ACCATGGGTTGCGAGAAACCCTGAAGACATACAGCAACTGGCCGACTTTCCCACAGGTTT
TTGTTGGAGGGGAGCTTGTGGGTGGATGTGACATTGTTTCATCCATGGCCGAGAAGGGGG
AGCTTGCTGCCCTTTTTAAGAAATAGGACTCACTCTGGAGTGCTTAAGTAATGCCTTGAA
CTACTGTTACCTGATGCGAATCGCTAGCTTGGCAGCTACCATCATTTTACATGCTGCAGT
AATGCTTCATTTACTGCAAGGCACATTGGTTTGGATCAGTTATACATATACACGTTTCTT
TGATTCAGATGAGGAAATGCTGTAAATTGTAATATGGTGGTTGCTTTTTGAGAGAGGATT
TGCAAGGGCAGAGGGCTGTCAGTATTTTGTGGTCGTTTCAGATTTTGTACGTGAAAATTT
GTATCGTTATGAGAAGTGAAAAATTGTATCGTTATGAGAAATAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case