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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6471 cluster # 6471       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6471#0 length = 717 sequences # 4  

consensusID : consensus_6471#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 717
fasta sequence
                              [CTGACCTGGACTGAAGGAGTAGAAAGGAATTTTATGCCTGACCTCCGCCTCCGATCCTCCGCCCTGAGCCGCGCGCCGCCGCCGCCGCCGCTGCAGGCTCCTTGTTCCTCGCCGGTTTGCTCGTATCGCTCCGTACAACGACGCACCGGTGCTAGAGAAGACAACAGCACAGGGAGGCGACAAAGGTGGCATTCTGTTCTCCAAAGAGCAGAAAACATGGTTAATGCAATAAA-GGGGTTGTTCATCTCCTGCGATGTACCGATGGCACAGTTCATTGTTAATCTGAATGCTTCAATGCCCGCTTCGGACAAGTTCATCCTGCACATGCTTGACCCGACACACATGTTTGTGCAGCCTCATGTGGCGGAGATGATCAGAAGTAAGATTTCAGAGTTCAGAGACCAAAACAGCTACGAGAAGCCAACATGAAAGATCACTCTACCCCACAATTCCTGTGTGTGCACCATTGAAAAGATACCAACGCTTGTCTATGGTTTATAGTTTTTCTTTAGATAGTCTATGGTTTAGTATAGTTGTGTGTGATGTGACTTGTGAGCGTCATGTGCCACTCATCAATCATGATGATGTTCAAGAATGATAAACTTGCAGTATCAGAAAATGTTGTGGCTTATGACTTATTTGTCTTCAGTGATAGTATTAATCACCTGTCCATTTGGTAGCGTTGGAACATTGAGAGACAGCCTATTTCTGAAGAAT]

[+] EMBL CF330510             [CTGACCTGGACTGAAGGAGTAGAAAGGAATTTTATGCCTGACCTCCGCCTCCGATCCTCCGCCCTGAGCCGCGCGCCGCCGCCGCCGCCGCTGCAGGCTCCTTGTTCCTCGCCGTTTTGCTCGTATCGCTCCGTACAACGACGCACCGGTGCTAGAGAAGACAACAGCACAGGGAGGCGACAAAGGTGGCATTCTGTACTCCAAAGAGCAGAAAACATGGTTAATGCAATAAA GGGGTTGTTCATCTCCTGCGATGTACCGATGGCACAGTTCATTGTTAATCTGAATGCTTCAATGCCCGCTTCGGACAAGTTCATCCTGCACATGCTTGAGCCGACACACATGTTTGTGCAGCCTCATGTGGCGGAGATGATCAGAAGTAAGATTTCAGAGTTCAGAGACCAAAACAGCTACGAGAAGCCAACATGAAAGATCACTCTACCCCACAATTCCTGTGTGTGCACCATTGAAAAGATACCAACGCTTGTCTATGGTTTATAGTTTTTCTTTAGATAGTCTATGGTTTAGTATAGTTGTGTGTGATGTGACTTGTGAGCGTCATGTGCCACTCATCAA                                                                                                                                             ]
[+] EMBL AK073925             [                      gtcGGAACCCTATGCCTGACCTCCGCCTCCGATCCTCCGCCCTGAGCCGCGCGCCGCCGCCGCCGCCGCTGCAGGCTCCTTGTTCCTCGCCGGTTTGCTCGTATCGCTCCGTACAACGACGCACCGGTGCTAGAGAAGACAACAGCACAGGGAGGCGACAAAGGTGGCATTCTGTTCTCCAAAGAGCAGAAAACATGGTTAATGCAATAAA GGGGTTGTTCATCTCCTGCGATGTACCGATGGCACAGTTCATTGTTAATCTGAATGCTTCAATGCCCGCTTCGGACAAGTTCATCCTGCACATGCTTGACCCGACACACATGTTTGTGCAGCCTCATGTGGCGGAGATGATCAGAAGTAAGATTTCAGAGTTCAGAGACCAAAACAGCTACGAGAAGCCAACATGAAAGATCACTCTACCCCACAATTCCTGTGTGTGCACCATTGAAAAGATACCAACGCTTGTCTATGGTTTATAGTTTTTCTTTAGATAGTCTATGGTTTAGTATAGTTGTGTGTGATGTGACTTGTGAGCGTCATGTGCCACTCATCAATCATGATGATGTTCAAGAATGATAAACTTGCAGTATCAGAAAATGTTGTGGCTTATGACTTATTTGTCTTCAGTGATAGTATTAATCACCTGTCCATTTGGTAGCGTTGGAACATTGAGAGACAGCCTATTTCTGAAGAAT]
[+] EMBL CF294667             [                                              GCCTCCGATCCTCCGCCCTGAGCCGCGCGCCGCCGCCGCCGCCGCTGCAGGCTCCTTGTTCCTCGCCGGTTTGCTCGTATCGCTCCGTACAACGACGCACCGGTGCTAGAGAAGACAACAGCACAGGGAGGCGACAAAGGTGGCATTCTGTTCTCCAAAGAGCAGAAAACATGGTTAATGCAATAAAGGGGGTTGTTCATCTCCTGCGATGTACCGATGGCACAGTTCATTGTTAATCTGAATGCTTCAATGCCCGCTTCGGACAAGTTCATCCTGCACATGCTTGACCCGACACACATGTTTGTGCAGCCTCATGTGGCGGAGATGATCAGAAGTAAGATTTCAGAGTTCAGAGACCAAAACAGCTACGAGAAGCCAACATGAAAGATCACTCTACCCCACAATTCCTGTGTGTGCACCATTGAAAAGATACCAACGCTTGTCTATGGTTTATAGTTTTTCTTTAAATAGTCTATGGTTT GTATAGTTGTGTGTGATGTGACTTGTGAGCGTCATGTGCCACTCATCAATCATGATGATGTTCAAGAATGATAAACTTGCAGTATCAGAAAATGTTGTGGCTTATGACTTATTTGTCTTCAGTGATAGTATTAATCAC                                                    ]
[+] EMBL BI807280             [                                                                                                                                                                       CACAGGGA GCGACAAAGGT GCATTCTGTTCTCCCAAGAACAGAAAACATGGTTAAT CAATAAA GGGGTTGTTCATCTCCTGCGATGTACCGATGGCACAGTTCATTGTTAATCTGAATGCTTCAATGCCCGCTTCGGACAAGTTCATCCTGCACATGCTTGACCCGACACACATGTTTGTGCAGCCTCATGTGGCGGAGATGATCAGAAGTAAGATTTCAGAGTTCAGAGACC AAACAGCTACGAGAAGCC ACATGAAAGATCACTCTACCCCAC ATTCCTGTGTGTGCACCCTTGAAAAGATACC ACGCTTGTCTATGGTTTATAGTTTTTCTTTAGATAGTCTATGGTTTAGTATAGTTGTGTGTGATGTGACTTGTGAGCGTCATGTGCCACTCATCAATCATGATGATGTTCAAGAATGATAAACTTGCAGTATCAGAAAATGTTGTGGCTTATGACTTATTTGTCTTCAGTGATAGTATTAATCACCTGTCCATTTGGTAGCGTTGGAACAaaaaaaaaa                  ]


>consensus_6471#0 CTGACCTGGACTGAAGGAGTAGAAAGGAATTTTATGCCTGACCTCCGCCTCCGATCCTCC GCCCTGAGCCGCGCGCCGCCGCCGCCGCCGCTGCAGGCTCCTTGTTCCTCGCCGGTTTGC TCGTATCGCTCCGTACAACGACGCACCGGTGCTAGAGAAGACAACAGCACAGGGAGGCGA CAAAGGTGGCATTCTGTTCTCCAAAGAGCAGAAAACATGGTTAATGCAATAAAGGGGTTG TTCATCTCCTGCGATGTACCGATGGCACAGTTCATTGTTAATCTGAATGCTTCAATGCCC GCTTCGGACAAGTTCATCCTGCACATGCTTGACCCGACACACATGTTTGTGCAGCCTCAT GTGGCGGAGATGATCAGAAGTAAGATTTCAGAGTTCAGAGACCAAAACAGCTACGAGAAG CCAACATGAAAGATCACTCTACCCCACAATTCCTGTGTGTGCACCATTGAAAAGATACCA ACGCTTGTCTATGGTTTATAGTTTTTCTTTAGATAGTCTATGGTTTAGTATAGTTGTGTG TGATGTGACTTGTGAGCGTCATGTGCCACTCATCAATCATGATGATGTTCAAGAATGATA AACTTGCAGTATCAGAAAATGTTGTGGCTTATGACTTATTTGTCTTCAGTGATAGTATTA ATCACCTGTCCATTTGGTAGCGTTGGAACATTGAGAGACAGCCTATTTCTGAAGAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)