Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6477 cluster # 6477       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6477#0 length = 2131 sequences # 3  
consensus_6477#1 length = 639 sequences # 1  

consensusID : consensus_6477#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2131
fasta sequence
                              [CTCCCACGCTCTCCCACCACTCCACTCTCCAATCCCATTAATTGCGCCTCCTCCGCTCGCTCCTCCGCCTCGTCTCGTCGTCGTCGGCGCCGGCGCGGAGAGGGAGGGAGACCGACGAGCGGCGGCGAGGAGGAATGGAGGTGAACGGCGGCGGGGCGGCGGGGCTGCCGGAGGCGTGGTCGCAGGTGAGGGCGCCGGTGATCGTGCCGCTGCTGAGGCTGGCGGTGGCGGTGTGCCTGACCATGTCGGTGCTGCTGTTCCTGGAGAGGATGTACATGGCGGTGGTCATCTCCGGCGTCAAGATCCTGCGCCGCCGCCCCGACCGCCGCTACCGCTGCGACCCCATCCCCGACGACGACCCCGAGCTCGGCACCTCCGCCTTCCCCGTCGTCCTCATCCAGATCCCCATGTTCAACGAGCGCGAGGTGTACCAGCTGTCGATCGGGGCGGTGTGCGGGCTATCGTGGCCGTCGGATCGGCTGGTGGTGCAGGTGCTCGACGACTCCACTGACCCCGTCATCAAGGAGATGGTGAGGATAGAGTGTGAGAGGTGGGCCCACAAGGGGGTGAACATAACGTACCAGATCCGGGAGAACCGCAAGGGGTACAAGGCTGGTGCACTCAAGGAGGGGATGAAGCATGGCTACGTCCGCGAATGCGAGTACGTGGCCATCTTCGACGCCGACTTCCAGCCGGACCCTGATTTCCTCCGCCGCACCATCCCCTTCCTCGTCCACAACTCCGACATCGCCCTCGTCCAGGCCCGCTGGCGTTTCGTGAATGCAGATGAGTGCTTGATGACAAGGATGCAGGAGATGTCCTTGGATTACCACTTCACAGTGGAGCAGGAAGTGAGCTCCTCTGTCTGCGCATTCTTCGGCTTCAATGGAACTGCTGGTGTGTGGCGCGTTTCCGCGGTAAACGAGGCGGGAGGATGGAAGGACCGGACCACAGTGGAGGACATGGATCTGGCAATCAGGGCGAGTCTTAAGGGATGGAAGTTTGTCTACCTTGGAGATGTTCAGGTCAAAAGTGAGCTGCCAAGTACTTTCAAAGCCTTTCGGTTTCAGCAGCACAGGTGGTCATGTGGGCCGGCAAACCTGTTCAGGAAGATGCTGATGGAGATTGTGAGAAATAAGAAAGTGACAATCTGGAAGAAGATTCATGTCATCTACAACTTCTTTTTGATCCGCAAAATCATCGCGCACATCGTGACCTTTGCGTTCTACTGCTTGATTATCCCGGCAACTATCTTTGTCCCTGAGGTCAGGATACCAAAGTGGGGCTGTGTGTACATTCCCACAATCATCACCCTTCTCAATTCCGTTGGAACTCCCAGGTCTTTTCACTTGCTTTTCTTCTGGATCCTCTTTGAGAATGTCATGTCACTGCATAGAACAAAGGCCACTCTCATCGGCCTGTTAGAAGCCGGTAGGGCGAACGAATGGGTCGTCACCGAGAAGCTCGGCAACGCTCTGAAGATGAAATCATCAAGCAAATCATCAGCCAAGAAATCGTTCATGAGGGTATGGGACAGGCTAAACGTCACGGAGCTCGGCGTGGCGGCATTCCTCTTCTCCTGTGGATGGTATGATCTTGCATTCGGGAAGGACCATTTCTTCATCTACCTCTTCTTCCAAGGCGCGGCGTTCTTCATCGTCGGTATCGGATACGTTGGCACAATTGTTCCTCAATCATAACAGAAGAGAAGCAAATATATATATTTTCGAGATCGGCCGCCTTCAAATTCACCATGTCTTCAGCAAGAGTCTAGTAGTTATATAAATCAGTTTGAAGTAAAGATCATGCAGCATTTTTTTACTCTCATTTTTCTCTGTTTCTTTTCTTTTCTTTTTCTTTTCTTCTTTGCCTTTTTCTCTGTTATGTGCTATTGTAAAAAATAGTGCAGTGTAAGGTCACTGCAGGAAG-AAAAAACTAGGGCAATTGGTGTGATCTGGGCAAGGAGGAGGTGAGGAGGATATCGTGATGTGTTTTTGCTTGTAGCAAAGTACGTGAGTGGTATGCTTAAAGAGGAGCAGGATGACTCTGCTT-CCGTTGTACTGTAATAACATACAGAAAAAAAAAAGGTCAGACAAGTGCTGGACAAAACCAAAATGTTCAGCCTTCTCTC]

[+] EMBL AK102694             [CTCCCACGCTCTCCCACCACTCCACTCTCCAATCCCATTAATTGCGCCTCCTCCGCTCGCTCCTCCGCCTCGTCTCGTCGTCGTCGGCGCCGGCGCGGAGAGGGAGGGAGACCGACGAGCGGCGGCGAGGAGGAATGGAGGTGAACGGCGGCGGGGCGGCGGGGCTGCCGGAGGCGTGGTCGCAGGTGAGGGCGCCGGTGATCGTGCCGCTGCTGAGGCTGGCGGTGGCGGTGTGCCTGACCATGTCGGTGCTGCTGTTCCTGGAGAGGATGTACATGGCGGTGGTCATCTCCGGCGTCAAGATCCTGCGCCGCCGCCCCGACCGCCGCTACCGCTGCGACCCCATCCCCGACGACGACCCCGAGCTCGGCACCTCCGCCTTCCCCGTCGTCCTCATCCAGATCCCCATGTTCAACGAGCGCGAGGTGTACCAGCTGTCGATCGGGGCGGTGTGCGGGCTATCGTGGCCGTCGGATCGGCTGGTGGTGCAGGTGCTCGACGACTCCACTGACCCCGTCATCAAGGAGATGGTGAGGATAGAGTGTGAGAGGTGGGCCCACAAGGGGGTGAACATAACGTACCAGATCCGGGAGAACCGCAAGGGGTACAAGGCTGGTGCACTCAAGGAGGGGATGAAGCATGGCTACGTCCGCGAATGCGAGTACGTGGCCATCTTCGACGCCGACTTCCAGCCGGACCCTGATTTCCTCCGCCGCACCATCCCCTTCCTCGTCCACAACTCCGACATCGCCCTCGTCCAGGCCCGCTGGCGTTTCGTGAATGCAGATGAGTGCTTGATGACAAGGATGCAGGAGATGTCCTTGGATTACCACTTCACAGTGGAGCAGGAAGTGAGCTCCTCTGTCTGCGCATTCTTCGGCTTCAATGGAACTGCTGGTGTGTGGCGCGTTTCCGCGGTAAACGAGGCGGGAGGATGGAAGGACCGGACCACAGTGGAGGACATGGATCTGGCAATCAGGGCGAGTCTTAAGGGATGGAAGTTTGTCTACCTTGGAGATGTTCAGGTCAAAAGTGAGCTGCCAAGTACTTTCAAAGCCTTTCGGTTTCAGCAGCACAGGTGGTCATGTGGGCCGGCAAACCTGTTCAGGAAGATGCTGATGGAGATTGTGAGAAATAAGAAAGTGACAATCTGGAAGAAGATTCATGTCATCTACAACTTCTTTTTGATCCGCAAAATCATCGCGCACATCGTGACCTTTGCGTTCTACTGCTTGATTATCCCGGCAACTATCTTTGTCCCTGAGGTCAGGATACCAAAGTGGGGCTGTGTGTACATTCCCACAATCATCACCCTTCTCAATTCCGTTGGAACTCCCAGGTCTTTTCACTTGCTTTTCTTCTGGATCCTCTTTGAGAATGTCATGTCACTGCATAGAACAAAGGCCACTCTCATCGGCCTGTTAGAAGCCGGTAGGGCGAACGAATGGGTCGTCACCGAGAAGCTCGGCAACGCTCTGAAGATGAAATCATCAAGCAAATCATCAGCCAAGAAATCGTTCATGAGGGTATGGGACAGGCTAAACGTCACGGAGCTCGGCGTGGCGGCATTCCTCTTCTCCTGTGGATGGTATGATCTTGCATTCGGGAAGGACCATTTCTTCATCTACCTCTTCTTCCAAGGCGCGGCGTTCTTCATCGTCGGTATCGGATACGTTGGCACAATTGTTCCTCAATCATAACAGAAGAGAAGCAAATATATATATTTTCGAGATCGGCCGCCTTCAAATTCACCATGTCTTCAGCAAGAGTCTAGTAGTTATATAAATCAGTTTGAAGTAAAGATCATGCAGCATTTTTTTACTCTCATTTTTCTCTGTTTCTTTTCTTTTCTTTTTCTTTTCTTCTTTGCCTTTTTCTCTGTTATGTGCTATTGTAAAAAATAGTGCAGTGTAAGGTCACTGCAGGAAGAAAAAAACTAGGGCAATTGGTGTGATCTGGGCAAGGAGGAGGTGAGGAGGATATCGTGATGTGTTTTTGCTTGTAGCAAAGTACGTGAGTGGTATGCTTAAAGAGGAGCAGGATGACTCTGCTT CCGTTGTACTGTAATAACATACAGAAAAAAAAAAGGTCAGACAAGTGCTGGACAAAACCAAAATGTTCAGCCTTCTCTC]
[+] EMBL AK059580             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGGTGAACATAACGTACCAGATCCGGGAGAACCGCAAGGGGTACAAGGCTGGTGCACTCAAGGAGGGGATGAAGCATGGCTACGTCCGCGAATGCGAGTACGTGGCCATCTTCGACGCCGACTTCCAGCCGGACCCTGATTTCCTCCGCCGCACCATCCCCTTCCTCGTCCACAACTCCGACATCGCCCTCGTCCAGGCCCGCTGGCGTTTCGTGAATGCAGATGAGTGCTTGATGACAAGGATGCAGGAGATGTCCTTGGATTACCACTTCACAGTGGAGCAGGAAGTGAGCTCCTCTGTCTGCGCATTCTTCGGCTTCAATGGAACTGCTGGTGTGTGGCGCGTTTCCGCGGTAAACGAGGCGGGAGGATGGAAGGACCGGACCACAGTGGAGGACATGGATCTGGCAATCAGGGCGAGTCTTAAGGGATGGAAGTTTGTCTACCTTGGAGATGTTCAGGTCAAAAGTGAGCTGCCAAGTACTTTCAAAGCCTTTCGGTTTCAGCAGCACAGGTGGTCATGTGGGCCGGCAAACCTGTTCAGGAAGATGCTGATGGAGATTGTGAGAAATAAGAAAGTGACAATCTGGAAGAAGATTCATGTCATCTACAACTTCTTTTTGATCCGCAAAATCATCGCGCACATCGTGACCTTTGCGTTCTACTGCTTGATTATCCCGGCAACTATCTTTGTCCCTGAGGTCAGGATACCAAAGTGGGGCTGTGTGTACATTCCCACAATCATCACCCTTCTCAATTCCGTTGGAACTCCCAGGTCTTTTCACTTGCTTTTCTTCTGGATCCTCTTTGAGAATGTCATGTCACTGCATAGAACAAAGGCCACTCTCATCGGCCTGTTAGAAGCCGGTAGGGCGAACGAATGGGTCGTCACCGAGAAGCTCGGCAACGCTCTGAAGATGAAATCATCAAGCAAATCATCAGCCAAGAAATCGTTCATGAGGGTATGGGACAGGCTAAACGTCACGGAGCTCGGCGTGGCGGCATTCCTCTTCTCCTGTGGATGGTATGATCTTGCATTCGGGAAGGACCATTTCTTCATCTACCTCTTCTTCCAAGGCGCGGCGTTCTTCATCGTCGGTATCGGATACGTTGGCACAATTGTTCCTCAATCATAACAGAAGAGAAGCAAATATATATATTTTCGAGATCGGCCGCCTTCAAATTCACCATGTCTTCAGCAAGAGTCTAGTAGTTATATAAATCAGTTTGAAGTAAAGATCATGCAGCATTTTTTTACTCTCATTTTTCTCTGTTTCTTTTCTTTTCTTTTTCTTTTCTTCTTTGCCTTTTTCTCTGTTATGTGCTATTGTAAAAAATAGTGCAGTGTAAGGTCACTGCAGGAAG AAAAAACTAGGGCAATTGGTGTGATCTGGGCAAGGAGGAGGTGAGGAGGATATCGTGATGTGTTTTTGCTTGTAGCAAAGTACGTGAGTGGTATGCTTAAAGAGGAGCAGGATGACTCTGCTT CCGTTGTACTGTAATAACATACAGAAAAAAAAAAGGTCAGACA                                    ]
[-] EMBL CB638692             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATCGTTCATGAGGGTATGGGACAGGTTAAACGTCACGGAGCTCGGCGTGGCGGCATTCTTCTTCTCCTGTGGATGGTATGATCTTGCATTCGGGAAGGACCATTTCTTCATCTACCTCTTCTTCCAAGGCGCGGCGTTCTTCATCGTCGGTATCGGATACGTTGGCACAATTGTTCCTCAATCATAACAGAAGAGAAGCAAATATATATATTTTCGAGATCGGCCGCCTTCAAATTCACCATGTCTTCAGCAAGAGTCTAGTAGTTATATAAATCAGTTTGAAGTAAAGATCATGCAGCATTTTTTTACTCTCATTTTTCTCTGTTTCTTTTCTTTTCTTTTTCTTTTCTTCTTGGCCTTTTTCTCTGTTATGTGCTATTGTAAAAAATAGTGCAGTGTAAGGTCACTGCAGGAAG AAAAAACTAGGGCAATTGGTGTGATTTGGGCAAGGAGGAGGTGAGGAGGATATCGTGATGTGTTTTTGCTTGTAGCAAAGTACGTGAGTGGTATGCTTAAAGAGGAGCAGGATGACTCTGCTTCCCGTTGTACTGTAATAACATACAGAAAAAAAAAAGGTCAGACAAGTGCTGGACGAAACCAAAATGTTCAG CTTCTtt ]


>consensus_6477#0 CTCCCACGCTCTCCCACCACTCCACTCTCCAATCCCATTAATTGCGCCTCCTCCGCTCGC TCCTCCGCCTCGTCTCGTCGTCGTCGGCGCCGGCGCGGAGAGGGAGGGAGACCGACGAGC GGCGGCGAGGAGGAATGGAGGTGAACGGCGGCGGGGCGGCGGGGCTGCCGGAGGCGTGGT CGCAGGTGAGGGCGCCGGTGATCGTGCCGCTGCTGAGGCTGGCGGTGGCGGTGTGCCTGA CCATGTCGGTGCTGCTGTTCCTGGAGAGGATGTACATGGCGGTGGTCATCTCCGGCGTCA AGATCCTGCGCCGCCGCCCCGACCGCCGCTACCGCTGCGACCCCATCCCCGACGACGACC CCGAGCTCGGCACCTCCGCCTTCCCCGTCGTCCTCATCCAGATCCCCATGTTCAACGAGC GCGAGGTGTACCAGCTGTCGATCGGGGCGGTGTGCGGGCTATCGTGGCCGTCGGATCGGC TGGTGGTGCAGGTGCTCGACGACTCCACTGACCCCGTCATCAAGGAGATGGTGAGGATAG AGTGTGAGAGGTGGGCCCACAAGGGGGTGAACATAACGTACCAGATCCGGGAGAACCGCA AGGGGTACAAGGCTGGTGCACTCAAGGAGGGGATGAAGCATGGCTACGTCCGCGAATGCG AGTACGTGGCCATCTTCGACGCCGACTTCCAGCCGGACCCTGATTTCCTCCGCCGCACCA TCCCCTTCCTCGTCCACAACTCCGACATCGCCCTCGTCCAGGCCCGCTGGCGTTTCGTGA ATGCAGATGAGTGCTTGATGACAAGGATGCAGGAGATGTCCTTGGATTACCACTTCACAG TGGAGCAGGAAGTGAGCTCCTCTGTCTGCGCATTCTTCGGCTTCAATGGAACTGCTGGTG TGTGGCGCGTTTCCGCGGTAAACGAGGCGGGAGGATGGAAGGACCGGACCACAGTGGAGG ACATGGATCTGGCAATCAGGGCGAGTCTTAAGGGATGGAAGTTTGTCTACCTTGGAGATG TTCAGGTCAAAAGTGAGCTGCCAAGTACTTTCAAAGCCTTTCGGTTTCAGCAGCACAGGT GGTCATGTGGGCCGGCAAACCTGTTCAGGAAGATGCTGATGGAGATTGTGAGAAATAAGA AAGTGACAATCTGGAAGAAGATTCATGTCATCTACAACTTCTTTTTGATCCGCAAAATCA TCGCGCACATCGTGACCTTTGCGTTCTACTGCTTGATTATCCCGGCAACTATCTTTGTCC CTGAGGTCAGGATACCAAAGTGGGGCTGTGTGTACATTCCCACAATCATCACCCTTCTCA ATTCCGTTGGAACTCCCAGGTCTTTTCACTTGCTTTTCTTCTGGATCCTCTTTGAGAATG TCATGTCACTGCATAGAACAAAGGCCACTCTCATCGGCCTGTTAGAAGCCGGTAGGGCGA ACGAATGGGTCGTCACCGAGAAGCTCGGCAACGCTCTGAAGATGAAATCATCAAGCAAAT CATCAGCCAAGAAATCGTTCATGAGGGTATGGGACAGGCTAAACGTCACGGAGCTCGGCG TGGCGGCATTCCTCTTCTCCTGTGGATGGTATGATCTTGCATTCGGGAAGGACCATTTCT TCATCTACCTCTTCTTCCAAGGCGCGGCGTTCTTCATCGTCGGTATCGGATACGTTGGCA CAATTGTTCCTCAATCATAACAGAAGAGAAGCAAATATATATATTTTCGAGATCGGCCGC CTTCAAATTCACCATGTCTTCAGCAAGAGTCTAGTAGTTATATAAATCAGTTTGAAGTAA AGATCATGCAGCATTTTTTTACTCTCATTTTTCTCTGTTTCTTTTCTTTTCTTTTTCTTT TCTTCTTTGCCTTTTTCTCTGTTATGTGCTATTGTAAAAAATAGTGCAGTGTAAGGTCAC TGCAGGAAGAAAAAACTAGGGCAATTGGTGTGATCTGGGCAAGGAGGAGGTGAGGAGGAT ATCGTGATGTGTTTTTGCTTGTAGCAAAGTACGTGAGTGGTATGCTTAAAGAGGAGCAGG ATGACTCTGCTTCCGTTGTACTGTAATAACATACAGAAAAAAAAAAGGTCAGACAAGTGC TGGACAAAACCAAAATGTTCAGCCTTCTCTC



consensusID : consensus_6477#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 639
fasta sequence
                              [ACGAGACAAGGGGGGGACAGGCTAAACGTCACGGAGCTCGGCGTGGCGGCATTCCTCTTCTCCTGTGGATGGTATGATCTTGCATTCGGGAAGGACCATTTCTTCATCTACCTCTTCTTCCAAGGCGCGGCGTTCTTCATCGTCGGTATGGGATACGTTGGCACAATTGTTCCTCAATCATAACAGAAGAGAAGCAAATATATATATTTTCGAGATCGGCCGCCTTCAAATTCACCATGTTTTCAGCAAGAGTCTAGTAGTTATATAAATCAGTTTGAAGTAAAGATCATGCAGCATTTTTTTACTCTCATTTTTCTCTGTTTCTTTTCTTTTCTTTTTCTTTTCTTCTTTGCCTTTTTCTCTGTTATGTGCTATTGTAAAAAATAGTGCAGTGTAAGGTCACTGCAGGAAGAAAAAACTAGGGCAATTGGTGTGATCTGGGCAAGGAGGAGGTGAGGAGGATATCGTGATGTGTTTTTGCTTGTAGCAAAGTACGTGAGTGGTATGCTTAAAGAGGAGCAGGATGACTCTGCTTCCGTTGTACTGTAATAACATACAAAAAAAAAAAAGGTCAGACAAGTGCTGGACAAAACCAAAATGTTCAGCCTTCTCTCGCATTCCCCTAAAAAAAAAAAAAAA]

[-] EMBL CA763215             [ACGAGACAAGGGGGGGACAGGCTAAACGTCACGGAGCTCGGCGTGGCGGCATTCCTCTTCTCCTGTGGATGGTATGATCTTGCATTCGGGAAGGACCATTTCTTCATCTACCTCTTCTTCCAAGGCGCGGCGTTCTTCATCGTCGGTATGGGATACGTTGGCACAATTGTTCCTCAATCATAACAGAAGAGAAGCAAATATATATATTTTCGAGATCGGCCGCCTTCAAATTCACCATGTTTTCAGCAAGAGTCTAGTAGTTATATAAATCAGTTTGAAGTAAAGATCATGCAGCATTTTTTTACTCTCATTTTTCTCTGTTTCTTTTCTTTTCTTTTTCTTTTCTTCTTTGCCTTTTTCTCTGTTATGTGCTATTGTAAAAAATAGTGCAGTGTAAGGTCACTGCAGGAAGAAAAAACTAGGGCAATTGGTGTGATCTGGGCAAGGAGGAGGTGAGGAGGATATCGTGATGTGTTTTTGCTTGTAGCAAAGTACGTGAGTGGTATGCTTAAAGAGGAGCAGGATGACTCTGCTTCCGTTGTACTGTAATAACATACAAAAAAAAAAAAGGTCAGACAAGTGCTGGACAAAACCAAAATGTTCAGCCTTCTCTCGCATTCCCCTAAAAAAAAAAAAAAA]


>consensus_6477#1 ACGAGACAAGGGGGGGACAGGCTAAACGTCACGGAGCTCGGCGTGGCGGCATTCCTCTTC TCCTGTGGATGGTATGATCTTGCATTCGGGAAGGACCATTTCTTCATCTACCTCTTCTTC CAAGGCGCGGCGTTCTTCATCGTCGGTATGGGATACGTTGGCACAATTGTTCCTCAATCA TAACAGAAGAGAAGCAAATATATATATTTTCGAGATCGGCCGCCTTCAAATTCACCATGT TTTCAGCAAGAGTCTAGTAGTTATATAAATCAGTTTGAAGTAAAGATCATGCAGCATTTT TTTACTCTCATTTTTCTCTGTTTCTTTTCTTTTCTTTTTCTTTTCTTCTTTGCCTTTTTC TCTGTTATGTGCTATTGTAAAAAATAGTGCAGTGTAAGGTCACTGCAGGAAGAAAAAACT AGGGCAATTGGTGTGATCTGGGCAAGGAGGAGGTGAGGAGGATATCGTGATGTGTTTTTG CTTGTAGCAAAGTACGTGAGTGGTATGCTTAAAGAGGAGCAGGATGACTCTGCTTCCGTT GTACTGTAATAACATACAAAAAAAAAAAAGGTCAGACAAGTGCTGGACAAAACCAAAATG TTCAGCCTTCTCTCGCATTCCCCTAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6477#0      CTCCCACGCTCTCCCACCACTCCACTCTCCAATCCCATTAATTGCGCCTCCTCCGCTCGC 60
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      TCCTCCGCCTCGTCTCGTCGTCGTCGGCGCCGGCGCGGAGAGGGAGGGAGACCGACGAGC 120
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      GGCGGCGAGGAGGAATGGAGGTGAACGGCGGCGGGGCGGCGGGGCTGCCGGAGGCGTGGT 180
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      CGCAGGTGAGGGCGCCGGTGATCGTGCCGCTGCTGAGGCTGGCGGTGGCGGTGTGCCTGA 240
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      CCATGTCGGTGCTGCTGTTCCTGGAGAGGATGTACATGGCGGTGGTCATCTCCGGCGTCA 300
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      AGATCCTGCGCCGCCGCCCCGACCGCCGCTACCGCTGCGACCCCATCCCCGACGACGACC 360
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      CCGAGCTCGGCACCTCCGCCTTCCCCGTCGTCCTCATCCAGATCCCCATGTTCAACGAGC 420
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      GCGAGGTGTACCAGCTGTCGATCGGGGCGGTGTGCGGGCTATCGTGGCCGTCGGATCGGC 480
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      TGGTGGTGCAGGTGCTCGACGACTCCACTGACCCCGTCATCAAGGAGATGGTGAGGATAG 540
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      AGTGTGAGAGGTGGGCCCACAAGGGGGTGAACATAACGTACCAGATCCGGGAGAACCGCA 600
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      AGGGGTACAAGGCTGGTGCACTCAAGGAGGGGATGAAGCATGGCTACGTCCGCGAATGCG 660
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      AGTACGTGGCCATCTTCGACGCCGACTTCCAGCCGGACCCTGATTTCCTCCGCCGCACCA 720
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      TCCCCTTCCTCGTCCACAACTCCGACATCGCCCTCGTCCAGGCCCGCTGGCGTTTCGTGA 780
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      ATGCAGATGAGTGCTTGATGACAAGGATGCAGGAGATGTCCTTGGATTACCACTTCACAG 840
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      TGGAGCAGGAAGTGAGCTCCTCTGTCTGCGCATTCTTCGGCTTCAATGGAACTGCTGGTG 900
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      TGTGGCGCGTTTCCGCGGTAAACGAGGCGGGAGGATGGAAGGACCGGACCACAGTGGAGG 960
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      ACATGGATCTGGCAATCAGGGCGAGTCTTAAGGGATGGAAGTTTGTCTACCTTGGAGATG 1020
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      TTCAGGTCAAAAGTGAGCTGCCAAGTACTTTCAAAGCCTTTCGGTTTCAGCAGCACAGGT 1080
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      GGTCATGTGGGCCGGCAAACCTGTTCAGGAAGATGCTGATGGAGATTGTGAGAAATAAGA 1140
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      AAGTGACAATCTGGAAGAAGATTCATGTCATCTACAACTTCTTTTTGATCCGCAAAATCA 1200
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      TCGCGCACATCGTGACCTTTGCGTTCTACTGCTTGATTATCCCGGCAACTATCTTTGTCC 1260
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      CTGAGGTCAGGATACCAAAGTGGGGCTGTGTGTACATTCCCACAATCATCACCCTTCTCA 1320
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      ATTCCGTTGGAACTCCCAGGTCTTTTCACTTGCTTTTCTTCTGGATCCTCTTTGAGAATG 1380
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      TCATGTCACTGCATAGAACAAAGGCCACTCTCATCGGCCTGTTAGAAGCCGGTAGGGCGA 1440
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      ACGAATGGGTCGTCACCGAGAAGCTCGGCAACGCTCTGAAGATGAAATCATCAAGCAAAT 1500
consensus_6477#1      ------------------------------------------------------------
                                                                                  

consensus_6477#0      CATCAGCCAAGAAATCGTTCATGAGGGTATGGGACAGGCTAAACGTCACGGAGCTCGGCG 1560
consensus_6477#1      -------------ACGAGACAAGGGGG----GGACAGGCTAAACGTCACGGAGCTCGGCG 43
                                   *     ** * ***    *****************************

consensus_6477#0      TGGCGGCATTCCTCTTCTCCTGTGGATGGTATGATCTTGCATTCGGGAAGGACCATTTCT 1620
consensus_6477#1      TGGCGGCATTCCTCTTCTCCTGTGGATGGTATGATCTTGCATTCGGGAAGGACCATTTCT 103
                      ************************************************************

consensus_6477#0      TCATCTACCTCTTCTTCCAAGGCGCGGCGTTCTTCATCGTCGGTATCGGATACGTTGGCA 1680
consensus_6477#1      TCATCTACCTCTTCTTCCAAGGCGCGGCGTTCTTCATCGTCGGTATGGGATACGTTGGCA 163
                      ********************************************** *************

consensus_6477#0      CAATTGTTCCTCAATCATAACAGAAGAGAAGCAAATATATATATTTTCGAGATCGGCCGC 1740
consensus_6477#1      CAATTGTTCCTCAATCATAACAGAAGAGAAGCAAATATATATATTTTCGAGATCGGCCGC 223
                      ************************************************************

consensus_6477#0      CTTCAAATTCACCATGTCTTCAGCAAGAGTCTAGTAGTTATATAAATCAGTTTGAAGTAA 1800
consensus_6477#1      CTTCAAATTCACCATGTTTTCAGCAAGAGTCTAGTAGTTATATAAATCAGTTTGAAGTAA 283
                      ***************** ******************************************

consensus_6477#0      AGATCATGCAGCATTTTTTTACTCTCATTTTTCTCTGTTTCTTTTCTTTTCTTTTTCTTT 1860
consensus_6477#1      AGATCATGCAGCATTTTTTTACTCTCATTTTTCTCTGTTTCTTTTCTTTTCTTTTTCTTT 343
                      ************************************************************

consensus_6477#0      TCTTCTTTGCCTTTTTCTCTGTTATGTGCTATTGTAAAAAATAGTGCAGTGTAAGGTCAC 1920
consensus_6477#1      TCTTCTTTGCCTTTTTCTCTGTTATGTGCTATTGTAAAAAATAGTGCAGTGTAAGGTCAC 403
                      ************************************************************

consensus_6477#0      TGCAGGAAGAAAAAACTAGGGCAATTGGTGTGATCTGGGCAAGGAGGAGGTGAGGAGGAT 1980
consensus_6477#1      TGCAGGAAGAAAAAACTAGGGCAATTGGTGTGATCTGGGCAAGGAGGAGGTGAGGAGGAT 463
                      ************************************************************

consensus_6477#0      ATCGTGATGTGTTTTTGCTTGTAGCAAAGTACGTGAGTGGTATGCTTAAAGAGGAGCAGG 2040
consensus_6477#1      ATCGTGATGTGTTTTTGCTTGTAGCAAAGTACGTGAGTGGTATGCTTAAAGAGGAGCAGG 523
                      ************************************************************

consensus_6477#0      ATGACTCTGCTTCCGTTGTACTGTAATAACATACAGAAAAAAAAAAGGTCAGACAAGTGC 2100
consensus_6477#1      ATGACTCTGCTTCCGTTGTACTGTAATAACATACAAAAAAAAAAAAGGTCAGACAAGTGC 583
                      *********************************** ************************

consensus_6477#0      TGGACAAAACCAAAATGTTCAGCCTTCTCTC------------------------- 2131
consensus_6477#1      TGGACAAAACCAAAATGTTCAGCCTTCTCTCGCATTCCCCTAAAAAAAAAAAAAAA 639
                      *******************************                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)