Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6491 cluster # 6491       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6491#0 length = 455 sequences # 4  

consensusID : consensus_6491#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 455
fasta sequence
                              [AAAGGGGCTTTCGT-GTTCGGG-GGTAT-GCCGGTCACA-GGCGCC-GCTC-GTCGACGC-GCTTCTTCTG-G-AGCTGGATGGCGGGCGTGCTCCAGTGCCCGCAGGAGCACTGTGCGCCGCTCCAGTGGTAGGAGCCCACGCGGTAGGCGCAGCGCGGGCACACGAGCTTGCCCTCCACGTCCGCCAGGTCGCCCATCCACTCGAGCTTGTCGTGCATGAAGAGCGACGTGCAGTCAGCCACCGGCGCTGCCACCTGCTCTCGCTTGGACCAGGCGAAGGGCTGCTGGCCGGGACCCGGCTCGTGGGGGGCCACCTGGGCGGGCACTCCCAGCTGGTGCCCACACCGCTTGCACGCGTAGAACCCCACCGGCGCCGCCGGAGTAGGCGGAGCTGGCGCTGACTCAGCCGCGGTGGTCGCGGTCTCAGTCGTGCTGGCGCTGCTTTCCAATGTGGTGCTGGTG]

[+] EMBL BU673553             [ AAGGGGCTTTCGT GTTCGGG GGTAT GCCGGTCACA GGCGCC GCTC GTCGACGC GCTTCTTCTG GAAGCTGGATGGCGGGCGTGCTCCAGTGCCCGCAGGAGCACTGTGCGCCGCTCCAGTGGTAGGAGCCCACGCGGTAGGCGCAGCGCGGGCACACGAGCTTGCCCTCCACGTCCGCCAGGTCGCCCATCCACTCGAACTTGTCGTGCATGAAGAGCGACGTGCAGTCAGCCACCGGCGCTGCCACCTGCTCTCGCTTGGACCAGGCGAAGGGCTGCTGGCCGGGACCCGGGTCGTGGGGGGCCACCTGGGCGGGCACTCCCAGCTGGTGCCCACACCGCTTGCACGCGTAGAACCCCACCGGCGGCGCCGGAGTAGGCGGAGCTGGCGCTGACTCAGCCGCGGTGGTCGCGGTCTCAGTCGTGCTGGCGCTGCTTTCCAATGTGGTGCTGGTG]
[+] EMBL CB964921             [ AAGGGGCTTTCGT GTTCGGG GGTAT GCCGGTCACA GGCGCC GCTC GTCGACGC GCTTCTTCTG G AGCTGGATGGCGGGCGTGCTCCAGTGCCCGCAGGAGCACTGTGCGCCGCTCCAGTGGTAGGAGCCCACGCGGTAGGCGCAGCGCGGGCACACGAGCTTGCCCTCCACGTCCGCCAGGTCGCCCATCCACTCGAGCTTGTCGTGCATGAAGAGCGACGTGCAGTCAGCCACCGCCGCTGCCACCTGCTCTCGCTTGGACCAGGCGAAGGCCTGCTGGCCGGGACCCGGCTCGTGGGGGGCCACCTGGGCGGGCACTCCCAGCTGGTGCCCACACCGCTTGCACGCGTAGAACCCCACCGCCGCCGCCGGAGTAGGCGGAGCTGGCGCTGCCTCAGCCGCGGTGGTCGCGGTCTCAGTCGTGCTGCCGCTGCTTTCCAATGTGGTGCTGGTG]
[+] EMBL CB966957             [ AAGGGGCTTTCGT GTTCGGG GGTAT GCCGGTCACA GGCGCC GCTC GTCGACGC GCTTCTTCTG G AGCTGGATGGCGGGCGTGCTCCAGTGCCCGCAGGAGCACTGTGCGCCGCTCCAGTGGTAGGAGCCCACGCGGTAGGCGCAGCGCGGGCACACGAGCTTGCCCTCCACGTCCGCCAGGTCGCCCATCCACTCGAGCTTGTCGTGCATGAAGAGCGACGTGCAGTCAGCCACCGGCGCTGCCACCTGCTCTCGCTTGGACCAGGCGAAGGGCTGCTGGCCGGGACCCGGCTCGTGGGGGGCCACCTGGGCGGGCACTCCCAGCTGGTGCCCACACCGCTTGCACGCGTAGAACCCCACCGGCGCCGCCGGAGTAGGCGGAGCTGGCGCTGGCTCAGCCGCGGTGGTCGCGGTCTCAGTCGTGCTGGCGCTGCTTTCCAATGTGGTGCTGGTG]
[+] EMBL CB964756             [agAGGGGCTTTCGTNGTTCGGGTGGTATAGCCGGTCACACGGCGCCTGCTCTGTCGACGCTGCTTCTTCTGTG AGCTGGATGGCGGGCGTGCTCCAGTGCCCGCAGGAGCACTGTGCGCCGCTCCAGTGGTAGGAGCCCACGCGGTAGGCGCAGCGCGGGCACACGAGCTTGCCCTCCACGTCCGCCAGGTCGCCCATCCACTCGAGCTTGTCGTGCATGAAGAGCGACGTGCAGTCAGCCACCGGCGGTGCCACCTGCTCTCGCTTGGACCAGGCGAAGGCCTGCTGGCCGGGACCCGGCTCGTGGGGGGCCACCTGGGCG                                                                                                                                             ]


>consensus_6491#0 AAAGGGGCTTTCGTGTTCGGGGGTATGCCGGTCACAGGCGCCGCTCGTCGACGCGCTTCT TCTGGAGCTGGATGGCGGGCGTGCTCCAGTGCCCGCAGGAGCACTGTGCGCCGCTCCAGT GGTAGGAGCCCACGCGGTAGGCGCAGCGCGGGCACACGAGCTTGCCCTCCACGTCCGCCA GGTCGCCCATCCACTCGAGCTTGTCGTGCATGAAGAGCGACGTGCAGTCAGCCACCGGCG CTGCCACCTGCTCTCGCTTGGACCAGGCGAAGGGCTGCTGGCCGGGACCCGGCTCGTGGG GGGCCACCTGGGCGGGCACTCCCAGCTGGTGCCCACACCGCTTGCACGCGTAGAACCCCA CCGGCGCCGCCGGAGTAGGCGGAGCTGGCGCTGACTCAGCCGCGGTGGTCGCGGTCTCAG TCGTGCTGGCGCTGCTTTCCAATGTGGTGCTGGTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)