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Oryza sativa
cluster # 6508 cluster # 6508       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6508#0 length = 1358 sequences # 4  
consensusID : consensus_6508#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1358
fasta sequence 
                              [TGATGATTCCATGAATCTCTGAAAAGGTAGGGGTCAAGGACCTTATGGGACTGCAATCGTGCCTGCCAATTGGGGAAGGACGCGGGCCTGGCAACCGCTCGGCTCTAGTAAGGGAAACAGGTATGTCTCACATCATTGCTCGAAGACTGGAAAAACTGCAAGTTAGCTCAGTTGGTTTAAAACGGCATATGTGAGTGACGCGAACTAGCATTTTGAATTGAGAAAGCCGGTGGCCGGGGTGGTCTATGTTGTTATGGTATCTCTCTTTAAAATCGAGATTGTGTGGGTGTTCAGTCTACCGCTCATGTTCGACGCTATTATGGACCGAGAAGAGGAATCAACGAAAAACCCAGGAATGAGCTGCGAAAGAAAAGCGTGACGAGCAAAGTCAAGTCTCCACGACTCGACATGTTAGAAGGAGCTAAATTAATAGGTGCCGGAGCTGCTACAATTGCTTTAGCGGGAGCTGCTGTCGGTATTGGAAACGTCTTCAGTTCTTTGATTCATTCCGTGGCGCGAAATCCTTCATTGGCTAAACAATTATTTGGTTATGCCATTTTGGGCTTTGCTCTCACCGAAGCTATTGCATTGTTTGCCCCAATGATGGCCTTTCTGATTTTATTCGTTTTCTGATCACATATTTCTTGGTGTAGATATCTCTCTTTGCAAATAGAGATACCGAGGCCCCCCAACCTACTAGTTGTTGGTGGGGGAAAGAAGAGTGGGAACGTGGGCTTCTTTCACAGTGCGTACCTCTCTTTCTCTTCTTTCTCGCTCTGTTTTGGAAACTAACTACTTCTCCGGAAGCAACGTCAACAACTTATGCAAGACTCCTTTCGTAACTACTTTTCGGTAGAAATACGGACTTCTTCCTATCAAACTGCTTTTGCCCAGCAATAATAGGCAAGACTTGATTCAGGTCAATACAATACTCTTCTTCGAACTTGTAAGCTTGGGACACAAGCGTAAACTTTTTCAAAAGTAAGACCAGGTACACTGCTAAACATAAGTATAAAGAGGTGGAAGGCCGGCTGTGCTTGTGCTCACCTACAGGTCTGTCCTAGCATACAGTATAGAAAAAGACTGTCTCTTATTTGTGATTTGTCTGAATCAGCGTATATTAACTAATACTACTTTATCCAGTCAATAATTAATTGAAAGGTCGTCTTTAATTAAAAAGTGCATAAGCAAGCAAGGAACGGAAGGCATGCTAACTACACTACTAGAGTCAATACACTACAAACCAAACTACTTGAGTAAGAATCTATTCTTTTTGCTTATTCGTAAGCGCATGAAGAAACTTATTTCACTCTAGCAATGAGCATAAATAGTTGACAACATAGTTGTATTAATTCTTA]

[+] EMBL AK064564             [TGATGATTCCATGAATCTCTGAAAAGGTAGGGGTCAAGGACCTTATGGGACTGCAATCGTGCCTGCCAATTGGGGAAGGACGCGGGCCTGGCAACCGCTCGGCTCTAGTAAGGGAAACAGGTATGTCTCACATCATTGCTCGAAGACTGGAAAAACTGCAAGTTAGCTCAGTTGGTTTAAAACGGCATATGTGAGTGACGCGAACTAGCATTTTGAATTGAGAAAGCCGGTGGCCGGGGTGGTCTATGTTGTTATGGTATCTCTCTTTAAAATCGAGATTGTGTGGGTGTTCAGTCTACCGCTCATGTTCGACGCTATTATGGACCGAGAAGAGGAATCAACGAAAAACCCAGGAATGAGCTGCGAAAGAAAAGCGTGACGAGCAAAGTCAAGTCTCCACGACTCGACATGTTAGAAGGAGCTAAATTAATAGGTGCCGGAGCTGCTACAATTGCTTTAGCGGGAGCTGCTGTCGGTATTGGAAACGTCTTCAGTTCTTCGATTCATTCCGTGGCGCGAAATCCTTCATTGGCTAAACAATTATTTGGTTATGCCATTTTGGGCTTTGCTCTCACCGAAGCTATTGCATTGTTTGCCCCAATGATGGCCTTTCTGATTTCATTCGTTTTCTGATCACATATTTCTTGGTGTAGATATCTCTCTTTGCAAATAGAGATACCGAGGCCCCCCAACCTACTAGTTGTTGGTGGGGGAAAGAAGAGTGGGAACGTGGGCTTCTTTCACAGTGCGTACCTCTCTTTCTCTTCTTTCTCGCTCTGTTTTGGAAACTAACTACTTCTCCGGAAGCAACGTCAACAACTTATGCAAGACTCCTTTCGTAACTACTTTTCGGTAGAAATACGGACTTCTTCCTATCAAACTGCTTTTGCCCAGCAATAATAGGCAAGACTTGATTCAGGTCAATACAATACTCTTCTTCGAACTTGTAAGCTTGGGACACAAGCGTAAACTTTTTCAAAAGTAAGACCAGGTACACTGCTAAACATAAGTATAAAGAGGTGGAAGGCCGGCTGTGCTTGTGCTCACCTACAGGTCTGTCCTAGCATACAGTATAGAAAAAGACTGTCTCTTATTTGTGATTTGTCTGAATCAGCGTATATTAACTAATACTACTTTATCCAGTCAATAATTAATTGAAAGGTCGTCTTTAATTAAAAAGTGCATAAGCAAGCAAGGAACGGAAGGCATGCTAACTACACTACTAGAGTCAATACACTACAAACCAAACTACTTGAGTAAGAATCTATTCTTTTTGCTTATTCGTAAGCGCATGAAGAAACTTATTTCACTCTAGCAATGAGCATAAATAGTTGACAACATAGTTGTATTAATTCTTA]
[+] EMBL AK063636             [TGATGATTCCATGAATCTCTGAAAAGGTAGGGGTCAAGGACCTTATGGGACTGCAATCGTGCCTGCCAATTGGGGAAGGACGCGGGCCTGGCAACCGCTCGGCTCTAGTAAGGGAAACAGGTATGTCTCACATCATTGCTCGAAGACTGGAAAAACTGCAAGTTAGCTCAGTTGGTTTAAAACGGCATATGTGAGTGACGCGAACTAGCATTTTGAATTGAGAAAGCCGGTGGCCGGGGTGGTCTATGTTGTTATGGTATCTCTCTTTAAAATCGAGATTGTGTGGGTGTTCAGTCTACCGCTCATGTTCGACGCTATTATGGACCGAGAAGAGGAATCAACGAAAAACCCAGGAAAGAGCTGCGAAAGAAAAGCGTGACGAGCAAAGTCAAGTCTCCACGACTCGACATGTTAGAAGGAGCTAAATTAATAGGTGCCGGAGCTGCTACAATTGCTTTAGCGGGAGCTGCTGTCGGTATTGGAAACGTCTTCAGTTCTTTGATTCATTCCGTGGCGCGAAATCCTTCATTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL BU673094             [                                                                                                                                                                                                                                                                                                                                                                                GAAAAGCGTGACGAGCAAAGTCAAGTCTCCACGACTCGACATGTTAGAAGGAGCTAAATCAATAGGTGCCGGAGCTGCTACAATTGCTTTAGCGGGAGCTGCTGTCGGTATTGGAAACGTCCTCAGTTCTTTGATTCATTCCGTGGCGCGAAATCCTTCATTGGCTAAACAATTATTTGGTTATGCCATTTTGGGCTTTGCTCTCACCGAAGCTATTGCATTGTTTGCCCTAATGATGGCCTTTCTGATTTTATTCGTTTTCCGATCACATATTTCTTGGTGTAGATATCTCTCTTTGCAAATAGAGATACCGAGGCCCCCCAACCTACTAGTTGTTGGTGGGGGAAAGAAGAGTGGGAACGTGGGCTTCTTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL OSC29601             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGCCTTTCTGATATTATTCGTTTTCTGATCACATATTTCTTGGTGTAGATATCTCTCTTTGCAAATAGAGATNCCGAGGCCCCCCAACCTACTAGTTGTTGGTGGGGGAAAGAAGAGAGGGAACGTGGGNTTCTTTCACAaaaana                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]




>consensus_6508#0
TGATGATTCCATGAATCTCTGAAAAGGTAGGGGTCAAGGACCTTATGGGACTGCAATCGT
GCCTGCCAATTGGGGAAGGACGCGGGCCTGGCAACCGCTCGGCTCTAGTAAGGGAAACAG
GTATGTCTCACATCATTGCTCGAAGACTGGAAAAACTGCAAGTTAGCTCAGTTGGTTTAA
AACGGCATATGTGAGTGACGCGAACTAGCATTTTGAATTGAGAAAGCCGGTGGCCGGGGT
GGTCTATGTTGTTATGGTATCTCTCTTTAAAATCGAGATTGTGTGGGTGTTCAGTCTACC
GCTCATGTTCGACGCTATTATGGACCGAGAAGAGGAATCAACGAAAAACCCAGGAATGAG
CTGCGAAAGAAAAGCGTGACGAGCAAAGTCAAGTCTCCACGACTCGACATGTTAGAAGGA
GCTAAATTAATAGGTGCCGGAGCTGCTACAATTGCTTTAGCGGGAGCTGCTGTCGGTATT
GGAAACGTCTTCAGTTCTTTGATTCATTCCGTGGCGCGAAATCCTTCATTGGCTAAACAA
TTATTTGGTTATGCCATTTTGGGCTTTGCTCTCACCGAAGCTATTGCATTGTTTGCCCCA
ATGATGGCCTTTCTGATTTTATTCGTTTTCTGATCACATATTTCTTGGTGTAGATATCTC
TCTTTGCAAATAGAGATACCGAGGCCCCCCAACCTACTAGTTGTTGGTGGGGGAAAGAAG
AGTGGGAACGTGGGCTTCTTTCACAGTGCGTACCTCTCTTTCTCTTCTTTCTCGCTCTGT
TTTGGAAACTAACTACTTCTCCGGAAGCAACGTCAACAACTTATGCAAGACTCCTTTCGT
AACTACTTTTCGGTAGAAATACGGACTTCTTCCTATCAAACTGCTTTTGCCCAGCAATAA
TAGGCAAGACTTGATTCAGGTCAATACAATACTCTTCTTCGAACTTGTAAGCTTGGGACA
CAAGCGTAAACTTTTTCAAAAGTAAGACCAGGTACACTGCTAAACATAAGTATAAAGAGG
TGGAAGGCCGGCTGTGCTTGTGCTCACCTACAGGTCTGTCCTAGCATACAGTATAGAAAA
AGACTGTCTCTTATTTGTGATTTGTCTGAATCAGCGTATATTAACTAATACTACTTTATC
CAGTCAATAATTAATTGAAAGGTCGTCTTTAATTAAAAAGTGCATAAGCAAGCAAGGAAC
GGAAGGCATGCTAACTACACTACTAGAGTCAATACACTACAAACCAAACTACTTGAGTAA
GAATCTATTCTTTTTGCTTATTCGTAAGCGCATGAAGAAACTTATTTCACTCTAGCAATG
AGCATAAATAGTTGACAACATAGTTGTATTAATTCTTA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)