These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6510#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1172 fasta sequence [GCGGGACGCCGGCCGGAGCACGCAAAAATCTCGCTCACCTCGTGAAGAGCTGAGATCAAGGGGGGAGAGATCGGAGGCGGCCGTAGCGTGGCGGAGATGGACCCTGCTAGCGTCAGCGCCAGCGCCAGCGGCGA-CCCGATGGCGGAGTGCCCTCCGGCGGCGGCTGCCGCTG-AGGGCAGCGACGCCATGGACTGCGGCGGCGGCGGGCGGAGCAACGCGAGGGTGGCCGGAGTGCTCCGCGGGTTCCTCGCCGTGCAGCAGCGCCGCGCCGAGGCGTACTCCACGCTCCGAAGGGGTTTTTCTGAATACATGGCTAA-TGGAGGTGAATTAGCTTTTCAACAACTATGCGCGAGTGTTACGGCGGAGTTCAATGATTGCTCGAAACAAGTTCTCGAAATGGTAGCCCTCCTATCAACGCCAGAAATTTGTCGTGGCGATCTTGCCAACTTACTGAAGGATGTGCAGGCACACGAGAAAGAGAAGTTGCATCTGACGGCAAGAATTCAGGTGTTGAAGAAAGCTGGTCGTCCTTCGGAACGCCTGGTGAACCATGCAGATTGCAGGTCAAGCAATATGGCTCAACATGTCTGTGTGCATGTCAAAGAGATAACCGAGGCTGCTGGCACGGAGGATGCAGAGGCAGATGCTGAGTATGATGGTGC-TCTTAAAGAGGCCATACAAGGTGTTCAAGAGGCAGTGACCAGCATAAACGAGCACATGGAGGAGGTGCGCTATGAGATTGATGCCCTTGGGGCAGAAATAATTGGTAATAACTTGGCTGAAGTTGAAGAAGCTTTCCCTGATACTCTATTGATAAAATAGAAAAGTTGCCTAGGCGCTAAAAGGCAGAGTGAAAACAAACAATTGGCACAAATATTTTGGACTAACAAAC-AGCTATTCGTGTCCC-TT-GGGGATTTATTAAAAAAAAGGAGAGAGAAGAGAACCGGAAGATTTGTTTATGCCAGCATTGCTTCTTTGGTGTTCTGCTATTCACTAGAATTCAGAGGAATGTGGCATGCTTTTGGTCCCTTGTTATTCACTAGAATTCAAAGGAATGTGGGATGCAATCTTTATGGGATCGATATTCGATAGAGAATGTGATCTGAAATTGTTGTGAATATTGTTATACTAATTTGGTATACTCATGCCAATAAGATTTTCTAAAAAAAAAA] [+] EMBL AK111252 [GCGGGACGCCGGCCGGAGCACGCAAAAATCTCGCTCACCTCGTGAAGAGCTGAGATCAAGGGGGGAGAGATCGGAGGCGGCCGTAGCGTGGCGGAGATGGACCCTGCTAGCGTCAGCGCCAGCGCCAGCGGCGA CCCGATGGCGGAGTGCCCTCCGGCGGCGGCTGCCGCTG AGGGCAGCGACGCCATGGACTGCGGCGGCGGCGGGCGGAGCAACGCGAGGGTGGCCGGAGTGCTCCGCGGGTTCCTCGCCGTGCAGCAGCGCCGCGCCGAGGCGTACTCCACGCTCCGAAGGGGTTTTTCTGAATACATGGCTAA TGGAGGTGAATTAGCTTTTCAACAACTATGCGCGAGTGTTACGGCGGAGTTCAATGATTGCTCGAAACAAGTTCTCGAAATGGTAGCCCTCCTATCAACGCCAGAAATTTGTCGTGGCGATCTTGCCAACTTACTGAAGGATGTGCAGGCACACGAGAAAGAGAAGTTGCATCTGACGGCAAGAATTCAGGTGTTGAAGAAAGCTGGTCGTCCTTCGGAACGCCTGGTGAACCATGCAGATTGCAGGTCAAGCAATATGGCTCAACATGTCTGTGTGCATGTCAAAGAGATAACCGAGGCTGCTGGCACGGAGGATGCAGAGGCAGATGCTGAGTATGATGGTGC TCTTAAAGAGGCCATACAAGGTGTTCAAGAGGCAGTGACCAGCATAAACGAGCACATGGAGGAGGTGCGCTATGAGATTGATGCCCTTGGGGCAGAAATAATTGGTAATAACTTGGCTGAAGTTGAAGAAGCTTTCCCTGATACTCTATTGATAAAATAGAAAAGTTGCCTAGGCGCTAAAAGGCAGAGTGAAAACAAACAATTGGCACAAATATTTTGGACTAACAAACAAGCTATTCGTGTCCCTTT GGGGATTTATTAAAAAAAAGGAGAGAGAAGAGAACCGGAAGATTTGTTTATGCCAGCATTGCTTCTTTGGTGTTCTGCTATTCACTAGAATTCAGAGGAATGTGGCATGCTTTTGGTCCCTTGTTATTCACTAGAATTCAAAGGAATGTGGGATGCAATCTTTATGGGATCGATATTCGATAGAGAATGTGATCTGAAATTGTTGTGAATATTGTTATACTAATTTGGTATACTCATGCCAATAAGATTTTCTAA ] [+] EMBL C26866 [ TCACCTCGTGAAGAGCTGAGATCAAGGGGGGAGAGATCGGAGGCGGCCGTAGCGTGGCGGAGATGGATCCTGCTAGCGTCA CCNCAGNCNCAAC GNGANCCCGATGGCGGAGTGCCCTCCGGCGGCGGCTGCC CTGAAGGGCAGCNACGCCATGGACTGCGGCGGCGGCGGGCGGA NAACGCAAGGNTGGCCGGAGTGCTCCGCGGGTTCCTCGCCGTGCAGCAGCGCCGCGCCGAGGCGTACTCCACGNTCCGAAGGGGTTTTTCTGAATACATGGCTAATTGGAGGTGAATTAGCTTTTCAACAACTATGCGCGAGTTTTACGGCGGAGTTCAATGATTNCTCGAAAAAAGTT TNGAAATGGTAGCCCTCCTATCAACGCCAGAAATTTn ] [+] EMBL CA753100 [ ttccatatTTC AT ATTATTCCCTATAGGTTCTCGAAATGGTAGCCCTCCTATCAACGCCAGAAATTTGTCGTGGCGATCTTGCCAACTTACTGAAGAATGTGCAGGCACACGAGAAAGAGAAGTTGCATCTGACGGCAAGAATTCAGGTGTTGAAGAAAGCTGGTCGTCCTTCGGAACGCCTGGTGAACCATGCAGATTGCAGGTCAAGCAATATGGCTCAACATGTCTGTGTGCATGTCAAAGAGATAACCGAGGCTGCTGGCACGGAGGATGCAGAGGCAGATGCTGAGTATGATGGTGC TCTTAAAGAGGCCATACAAGGTGTNCAAGAGGCAGTGACCAGCATAAACGAGCACATGGAGGAGGTGCGCTATGAGATTGATGCCCTTGGGGCAGAAATAATNGGTAATAACTTGGCTGAAGTNGAAGAAGC TTCCCTGATACTCTATNGATAAAATAGAANAGTNGCCTAGGCGCT AAAGGCA AGTGANCACAACCA TGGCAC AATATNNTGGACT ACCAAC AGCCA TCGTGTCCC TT GGGATNNATAAAAAcgaa ] [+] EMBL BI804061 [ GAGCCAGAT CTGAGTATGATGGTGCTTCTTAAAGAGCCCATACAAGTTGTTCAAGAGCCAGTGACCAGCATAAACGAGCACATGGAGGAGGTGCGCTATGAGATTGATGCCCTTGGGCCAGAAATAATTGGTAATAACTTGGCTGAAGTTGAAGAAGCTTTCCCTGATACTCTATTGATAAAATAGAAAAGTTGCCTAGGCGCTAAAAGGCAGAGTGAAAACAAACAATTGGCACAAATATTTTGGACTAACAAAC AGCTATTCGTGTCCC TTCGGGGATTTATTAAAAAAAAGGAGAGAGAAGAGAACCGGAAGATTTGTTTAGGCCAGCATTGCTTCTTTGGTGTTCTGCTATTCGCTAGAATTCAGAGGAATGTGGCATGCTTTTGGTCCCTTGTTATTCACTAGAATTCAAAGGAATGTGGGATGC ATCTTTATGGGATCGATATTCGATAGAGAATGTGATCTGAAATTGTTGTGAATATTGTTATACTAATTTGGTATACTCATGCC ATAAGATTTTCTAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||