cluster # 6526

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Oryza sativa
cluster # 6526 cluster # 6526 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6526#0 length = 1898 sequences # 4
consensusID : consensus_6526#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1898
fasta sequence
                              [CGCGACGCGACACGGGAGCAAGCAGCGCGCGCGCGCTACTCCGAACCGAAGGCCCACGCGGCGCCATGCTGCTGGGTGCCATGAGCGGCGGCGGCGTCGTCGTCGCCGTCGCCGTCGCCTACGCCGCCCTGGCCGTGGTGGCGCTGCGGATGGCGCTGTCGTACAAGTCGGCGCTGTACGCGGTGCGGCGGCTGTGGCGGTGGGCCGACGAGTGGGCGCAGGCGTACCAGTACCACGAGGTGCCACGCTTCGCGTGCGACGGCGGCGGCGCCGAGAACCCGCTGTTCCGCAAGGCGGCGCAGTACGTGGCGGTGCTGCCGTCGCTCGAAGACGCCGACGCCGCCTCCGTGCTGTCGTCCGCGTCGAGGACCAACGGCGGCTTCTCCCTGCAGCTTGGGCCAGGCCACACCGCGCGCGACGCCTTCCTCGGCGCGCGCCTCGCGTGGACAAACCGGGGCGACGTGCTGGTTCTGCGCGTGCGCCGCCATGACCGGACGCGCGTGCTGCGGCCCTACCTGCAGCACGTCGAGTCCGTTGCCGATGAGATGGAGCTCCGGCGACGCGAGCTGCGGCTGTTCGCCAACACCGGCGTGGACGGGAGCACCGGGACGCCGAGGTGGGCGTCGGCGCCGTTCACCCACCCGGCGACGCTTGACACGGTGGCCATGGACCCCGACCTCAAGGCTCGCGTCCGCGCCGACCTCGAGAACTTCCTCAAGGGCCGCGCCTACTACCACCGCCTCGGGCGGGTGTGGCGCCGGAGCTACCTCCTCTACGGCCCGCTGGGCACCGGCAAGTCGACCTTCGCGGCGGCCATGGCTCGGTTCTTGGGCTACGACATCTACGACGTCGATCTCTCCCGCGCCGGCAGCGACGACCTCCGCGCGCTGCTCCTGCACACCACCCCGCGGTCCCTCATCCTCGTGGAGGACCTCGACCGGTTCCTCCAGGGCGGCGGGGCCGGGGACGCGGAGGCGAGGGCGGCGAGGGTGCTGAGCTTCATGGACGGCGTCGCGTCGTGCTGTGGCGAGGAGCGGGTGATGGTGTTCACGATGCGCGGCGGCAAGGAGGGCGTGGACGCGGCGGTGGTGCGGCCGGGGAGGCTGGACGTGCACATCCACTTCACGCTCTGCGACTTCGAGGCGTTCAAGGCGCTGGCCAGCAACTACCTCGGCCTCAAGGACCACAAGCTGTACCCGCAGGTGGAGGAGAGCTTCCATGGCGGCGCGCGCCTCAGCCCCGCCGAGCTCGGCGAGATCATGCTCGCCAACCGCTCGTCGCCGAGCCGCGCGCTGCGCAACGTCATCACGAAGCTCCAGCACGTGTCCGGGGC-GGCGGCGGCGCCGCGGCCGCCGCACAGGCGGAACACGAGCTGGTCCGGCGCGGGC-GGGCCATGGGAGGAGCAGGCCGCGCGCGCTAGCGCGGACGC-GGCGGACGGCGGCGAGGAGGCGATCACGGCGACGGCGGCGTGCGGGGTGTTCGCGAAGGACGCGCCGATGAGGGAGTTCAAGAAGCTGTACGGGCTGATCAAGATCAGGAGCCGGAAGGAGGGCTCCAGCGGGTTCATGCCCTTGCACGGCGGCGAAGCGCCGTCGCCGGCAAACGGGCGGGGCAGCGAGCACGACAAGGAGCGGTGATTAATTAGGCGATGGTAGTAGACCCCGTCAAACAAGAAAAATATTTTTGATTTTTTGTCCGTGCTTTTTTACTTCGTGTTAGGCTAGTAGGAGTACTACGTAGTTGTAGTTAGTTCACTTTTTAATTGTGGATGGAAGAAATCAAACACGAAATGGAGGATGATAATGGGATTGGGTGATGTACAATTGTACATGAGGATTGTTTGGTTTTAACAGGGTATAAAACAAAAGAGATGGGCAAGTTGAAATTCTTGANAAAAA]

[+] EMBL AK108730             [CGCGACGCGACACGGGAGCAAGCAGCGCGCGCGCGCTACTCCGAACCGAAGGCCCACGCGGCGCCATGCTGCTGGGTGCCATGAGCGGCGGCGGCGTCGTCGTCGCCGTCGCCGTCGCCTACGCCGCCCTGGCCGTGGTGGCGCTGCGGATGGCGCTGTCGTACAAGTCGGCGCTGTACGCGGTGCGGCGGCTGTGGCGGTGGGCCGACGAGTGGGCGCAGGCGTACCAGTACCACGAGGTGCCACGCTTCGCGTGCGACGGCGGCGGCGCCGAGAACCCGCTGTTCCGCAAGGCGGCGCAGTACGTGGCGGTGCTGCCGTCGCTCGAAGACGCCGACGCCGCCTCCGTGCTGTCGTCCGCGTCGAGGACCAACGGCGGCTTCTCCCTGCAGCTTGGGCCAGGCCACACCGCGCGCGACGCCTTCCTCGGCGCGCGCCTCGCGTGGACAAACCGGGGCGACGTGCTGGTTCTGCGCGTGCGCCGCCATGACCGGACGCGCGTGCTGCGGCCCTACCTGCAGCACGTCGAGTCCGTTGCCGATGAGATGGAGCTCCGGCGACGCGAGCTGCGGCTGTTCGCCAACACCGGCGTGGACGGGAGCACCGGGACGCCGAGGTGGGCGTCGGCGCCGTTCACCCACCCGGCGACGCTTGACACGGTGGCCATGGACCCCGACCTCAAGGCTCGCGTCCGCGCCGACCTCGAGAACTTCCTCAAGGGCCGCGCCTACTACCACCGCCTCGGGCGGGTGTGGCGCCGGAGCTACCTCCTCTACGGCCCGCTGGGCACCGGCAAGTCGACCTTCGCGGCGGCCATGGCTCGGTTCTTGGGCTACGACATCTACGACGTCGATCTCTCCCGCGCCGGCAGCGACGACCTCCGCGCGCTGCTCCTGCACACCACCCCGCGGTCCCTCATCCTCGTGGAGGACCTCGACCGGTTCCTCCAGGGCGGCGGGGCCGGGGACGCGGAGGCGAGGGCGGCGAGGGTGCTGAGCTTCATGGACGGCGTCGCGTCGTGCTGTGGCGAGGAGCGGGTGATGGTGTTCACGATGCGCGGCGGCAAGGAGGGCGTGGACGCGGCGGTGGTGCGGCCGGGGAGGCTGGACGTGCACATCCACTTCACGCTCTGCGACTTCGAGGCGTTCAAGGCGCTGGCCAGCAACTACCTCGGCCTCAAGGACCACAAGCTGTACCCGCAGGTGGAGGAGAGCTTCCATGGCGGCGCGCGCCTCAGCCCCGCCGAGCTCGGCGAGATCATGCTCGCCAACCGCTCGTCGCCGAGCCGCGCGCTGCGCAACGTCATCACGAAGCTCCAGCACGTGTCCGGGGC GGCGGCGGCGCCGCGGCCGCCGCACAGGCGGAACACGAGCTGGTCCGGCGCGGGC GGGCCATGGGAGGAGCAGGCCGCGCGCGCTAGCGCGGACGC GGCGGACGGCGGCGAGGAGGCGATCACGGCGACGGCGGCGTGCGGGGTGTTCGCGAAGGACGCGCCGATGAGGGAGTTCAAGAAGCTGTACGGGCTGATCAAGATCAGGAGCCGGAAGGAGGGCTCCAGCGGGTTCATGCCCTTGCACGGCGGCGAAGCGCCGTCGCCGGCAAACGGGCGGGGCAGCGAGCACGACAAGGAGCGGTGATTAATTAGGCGATGGTAGTAGACCCCGTCAAACAAGAAAAATATTTTTGATTTTTTGTCCGTGCTTTTTTACTTCGTGTTAGGCTAGTAGGAGTACTACGTAGTTGTAGTTAGTTCACTTTTTAATTGTGGATGGAAGAAATCAAACACGAAATGGAGGATGATAATGGGATTGGGTGATGTACAATTGTACATGAGGATTGTTTGGTTTTAACAGGGTATAAAACAAAAGAGATGGGCAAGTT                 ]
[+] EMBL CB636443             [          CACGGGAGCAAGCAGCGCGCGCGCGCTACTCCGAACCGAAGGCCCACGCGGCGCCATGCTGCTGGGTGCCATGAGCGGCGGCGGCGTCGTCGTCGCCGTCGCCGTCGCCTACGCCGCCCTGGCCGTGGTGGCGCTGCGGATGGCGCTGTCGTACAAGTCGGCGCTGTACGCGGTGCGGCGGCTGTGGCGGTGGGCCGACGAGTGGGCGCAGGCGTACCAGTACCACGAGGTGCCACGCTTCGCGTGCGACGGCGGCGGCGCCGAGAACCCGCTGTTCCGCAAGGCGGCGCAGTACGTGGCGGTGCTGCCGTCGCTCGAGGACGCCGACGCCGCCTCCGTGCTGTCGTCCGCGTCGAGGACCAACGGCGGCTTCTCCCTGCAGCTTGGGCCATGCCACACCGCGCGCGACGCCTTTCTCGGCGCGCGCCTCGCGTGGACAAACCGGGGCGACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU173962             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGGGCNGGCGGCGGCGCCGCGGCCGCCGCACAGGCGGAACACGAGCTGGTCCGGCGCGGGCAGGGCCATGGGAGGAGCAGGCCGCGCGCGCCAGCGCGGACGCTGGCGGACGGCGGCGAGGAGGCGATCACGGCGACGGCGGCGTGCGGGGTGTTCGCGAAGGACGCGCCGATGAGGGAGTTCAAGAAGCTGTACGGGCTGATCAAGATCAGGAGCCGGAAGGAGGGCTCCAGCGGGTTCATGCCCTTGCACGGCGGCGAAGCGCCGTCGCCGGCAAACGGGCGGGGCAGCGAGCACNACAAGGAGCGGTGATTAATTANGC                                                                                                                                                                                                                                                           ]
[+] EMBL AU057553             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCGGCAAACGGGCGGGGCAGCGAGCACGACAAGGAGCGGTGATTAATTAGGCGATGGTAGTAGACCCCGTCAAACAAGAAAAATATTTTTGATTTTTTGTCCGTGCTTTTTTACTTCGTGTTAGGCTAGTAGGAGTACTACGTAGTTGTAGTTAGTTCACTTTTTAATTGTGGATGGAAGAAATCAAACACGAAATGGAGGATGATAATGGGATTGGGTGATGTACAATTGTACATGAGGATTGTTTGGTTTTAACAGGGTATAAAACANNAGAGATGGGCAAGTTGAAATTCTTGANAAAAA]




>consensus_6526#0
CGCGACGCGACACGGGAGCAAGCAGCGCGCGCGCGCTACTCCGAACCGAAGGCCCACGCG
GCGCCATGCTGCTGGGTGCCATGAGCGGCGGCGGCGTCGTCGTCGCCGTCGCCGTCGCCT
ACGCCGCCCTGGCCGTGGTGGCGCTGCGGATGGCGCTGTCGTACAAGTCGGCGCTGTACG
CGGTGCGGCGGCTGTGGCGGTGGGCCGACGAGTGGGCGCAGGCGTACCAGTACCACGAGG
TGCCACGCTTCGCGTGCGACGGCGGCGGCGCCGAGAACCCGCTGTTCCGCAAGGCGGCGC
AGTACGTGGCGGTGCTGCCGTCGCTCGAAGACGCCGACGCCGCCTCCGTGCTGTCGTCCG
CGTCGAGGACCAACGGCGGCTTCTCCCTGCAGCTTGGGCCAGGCCACACCGCGCGCGACG
CCTTCCTCGGCGCGCGCCTCGCGTGGACAAACCGGGGCGACGTGCTGGTTCTGCGCGTGC
GCCGCCATGACCGGACGCGCGTGCTGCGGCCCTACCTGCAGCACGTCGAGTCCGTTGCCG
ATGAGATGGAGCTCCGGCGACGCGAGCTGCGGCTGTTCGCCAACACCGGCGTGGACGGGA
GCACCGGGACGCCGAGGTGGGCGTCGGCGCCGTTCACCCACCCGGCGACGCTTGACACGG
TGGCCATGGACCCCGACCTCAAGGCTCGCGTCCGCGCCGACCTCGAGAACTTCCTCAAGG
GCCGCGCCTACTACCACCGCCTCGGGCGGGTGTGGCGCCGGAGCTACCTCCTCTACGGCC
CGCTGGGCACCGGCAAGTCGACCTTCGCGGCGGCCATGGCTCGGTTCTTGGGCTACGACA
TCTACGACGTCGATCTCTCCCGCGCCGGCAGCGACGACCTCCGCGCGCTGCTCCTGCACA
CCACCCCGCGGTCCCTCATCCTCGTGGAGGACCTCGACCGGTTCCTCCAGGGCGGCGGGG
CCGGGGACGCGGAGGCGAGGGCGGCGAGGGTGCTGAGCTTCATGGACGGCGTCGCGTCGT
GCTGTGGCGAGGAGCGGGTGATGGTGTTCACGATGCGCGGCGGCAAGGAGGGCGTGGACG
CGGCGGTGGTGCGGCCGGGGAGGCTGGACGTGCACATCCACTTCACGCTCTGCGACTTCG
AGGCGTTCAAGGCGCTGGCCAGCAACTACCTCGGCCTCAAGGACCACAAGCTGTACCCGC
AGGTGGAGGAGAGCTTCCATGGCGGCGCGCGCCTCAGCCCCGCCGAGCTCGGCGAGATCA
TGCTCGCCAACCGCTCGTCGCCGAGCCGCGCGCTGCGCAACGTCATCACGAAGCTCCAGC
ACGTGTCCGGGGCGGCGGCGGCGCCGCGGCCGCCGCACAGGCGGAACACGAGCTGGTCCG
GCGCGGGCGGGCCATGGGAGGAGCAGGCCGCGCGCGCTAGCGCGGACGCGGCGGACGGCG
GCGAGGAGGCGATCACGGCGACGGCGGCGTGCGGGGTGTTCGCGAAGGACGCGCCGATGA
GGGAGTTCAAGAAGCTGTACGGGCTGATCAAGATCAGGAGCCGGAAGGAGGGCTCCAGCG
GGTTCATGCCCTTGCACGGCGGCGAAGCGCCGTCGCCGGCAAACGGGCGGGGCAGCGAGC
ACGACAAGGAGCGGTGATTAATTAGGCGATGGTAGTAGACCCCGTCAAACAAGAAAAATA
TTTTTGATTTTTTGTCCGTGCTTTTTTACTTCGTGTTAGGCTAGTAGGAGTACTACGTAG
TTGTAGTTAGTTCACTTTTTAATTGTGGATGGAAGAAATCAAACACGAAATGGAGGATGA
TAATGGGATTGGGTGATGTACAATTGTACATGAGGATTGTTTGGTTTTAACAGGGTATAA
AACAAAAGAGATGGGCAAGTTGAAATTCTTGANAAAAA
clustalw multiple alignements is not computed in this case