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Oryza sativa
cluster # 6528 cluster # 6528       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6528#0 length = 897 sequences # 4  

consensusID : consensus_6528#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 897
fasta sequence
                              [ATCGTTCGTCCCATCCGTCAGCGCGCGTACAAATAGCCGGCGCGCCCGCGGCGAGCGTTTCGTACTCTGTCTGTTCTGCCGCACGAGACACGAGAGCCACGGATAGCTAGACACAGACGGCGCGCGGAGACAGGGGCAATGGACGGGCATGGGAAGGAGGGCAGCAGCAACGGCGCCAGCGGCGGCGGCGGCGGCGGCTGGAGCGATCAGTGCGACGTGGTGGCCAGGGCCTTCGTGGAGTACTACTACCAGACGTTCGACACCAACCGCGCCGCGCTCGCCGCGCTCTACGGCCAGACGTCCATGCTCTCCTTCGAGGGACACATGGTGGCCGGCGCCGAGGAGATCGGCCGGAAGCTGTTGGGGCTGCCCTTCGAGCAATGCCGGCACGCCGTCTGCACCGTCGACTGCCAACCCACGCCGTCCTTCCCGGGAGGCATCCTCGTCTTCGTCAGTGGCAACCTCCAGCTCGCCGGCGAGGAGCACCAGCTCAGGTTCAGCCAGATGTTTCAGCTGGTGCCCAACGAGCAGGGAAGCTTCTTCGTGCAGAATGACATATTCCGGCTCAACTACGGCTAGCAGCAGGTTGCGTGTGGCTGCCGAAAGGAACAGGGTGCTAGGATGCTTTGGGCCCATGTGGATGCGAGATTGCGAGAAGCTTCTCCGGGCCGTCTCTACCGTTTCGCTTTCATCCTCTGTACTTTTACCTTCGTTCATGTAGCATCGTAGAATAAGTTGGGCGATGACCGTGTTGTGTTGTGCCTTCTCCTGATTGTTAAGTAATTCCGTGGAACGATTGAAATCTCCATGCATGGGCTACCGGTTTACATCCATTTAGACAAGAAAACCATTTTTTTACAGTTACACAGGANAATATGTGTACTATCCCAAAAAAAA]

[+] EMBL CF335336             [ATCGTTCGTCCCATCCGTCAGCGCGCGTACAAATAGCCGGCGCGCCCGCGGCGAGCGTTTCGTACTCTGTCTGTTCTGCCGCACGAGACACGAGAGCCACGGATAGCTAGACACAGACGGCGCGCGGAGACAGGGGCAATGGACGGGCATGGGAAGGAGGGCAGCAGCAACGGCGCCAGCGGCGGCGGCGGCGGCGGCTGGAGCGATCAGTGCGACGTGGTGGCCAGGGCCTTCGTGGAGTACTACTACCAGACGTTCGACACCAACCGCGCCGCGCTCGCCGCGCTCTACGGCCAGACGTCCATGCTCTCCTTCGAGGGACACATGGTGGCCGGCGCCGAGGAGATCGGCCGGAAGCTGTTGGGGCTGCCCTTCGAGCAATGCCGGCACGCCGTCTGCACCGTCGACTGCCAACCCACGCCGTCCTTCCCGGGAGGCATCCTCGTCTTCGTCGGTGGCAACCTCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK073030             [                                                                  CTGTCTGTTCTGCCGCACGAGACACGAGAGCCACGGATAGCTAGACACAGACGGCGCGCGGAGACAGGGGCAATGGACGGGCATGGGAAGGAGGGCAGCAGCAACGGCGCCAGCGGCGGCGGCGGCGGCGGCTGGAGCGATCAGTGCGACGTGGTGGCCAGGGCCTTCGTGGAGTACTACTACCAGACGTTCGACACCAACCGCGCCGCGCTCGCCGCGCTCTACGGCCAGACGTCCATGCTCTCCTTCGAGGGACACATGGTGGCCGGCGCCGAGGAGATCGGCCGGAAGCTGTTGGGGCTGCCCTTCGAGCAATGCCGGCACGCCGTCTGCACCGTCGACTGCCAACCCACGCCGTCCTTCCCGGGAGGCATCCTCGTCTTCGTCAGTGGCAACCTCCAGCTCGCCGGCGAGGAGCACCAGCTCAGGTTCAGCCAGATGTTTCAGCTGGTGCCCAACGAGCAGGGAAGCTTCTTCGTGCAGAATGACATATTCCGGCTCAACTACGGCTAGCAGCAGGTTGCGTGTGGCTGCCGAAAGGAACAGGGTGCTAGGATGCTTTGGGCCCATGTGGATGCGAGATTGCGAGAAGCTTCTCCGGGCCGTCTCTACCGTTTCGCTTTCATCCTCTGTACTTTTACCTTCGTTCATGTAGCATCGTAGAATAAGTTGGGCGATGACCGTGTTGTGTTGTGCCTTCTCCTGATTGTTAAGTAATTCCGTGGAACGATTGAA                                                                                                ]
[+] EMBL AK098941             [                                                                       TGTTCTGCCGCACGAGACACGAGAGCCACGGATAGCTAGACACAGACGGCGCGCGGAGACAGGGGCAATGGACGGGCATGGGAAGGAGGGCAGCAGCAACGGCGCCAGCGGCGGCGGCGGCGGCGGCTGGAGCGATCAGTGCGACGTGGTGGCCAGGGCCTTCGTGGAGTACTACTACCAGACGTTCGACACCAACCGCGCCGCGCTCGCCGCGCTCTACGGCCAGACGTCCATGCTCTCCTTCGAGGGACACATGGTGGCCGGCGCCGAGGAGATCGGCCGGAAGCTGTTGGGGCTGCCCTTCGAGCAATGCCGGCACGCCGCCGGCACCGTCGACTGCCAACCCACGCCGTCCTTCCCGGGAGGCATCCTCGTCTTCGTCAGTGGCAACCTCCAGCTCGCCGGCGAGGAGCACCAGCTCAGGTTCAGCCAGATGTTTCAGCTGGTGCCCAACGAGCAGGGAAGCTTCTTCGTGCAGAATGACATATTCCGGCTCAACTACGGCTAGCAGCAGGTTGCGTGTGGCTGCCGAAAGGAACAGGGTGCTAGGATGCTTTGGGCCCATGTGGATGCGAGATTGCGAGAAGCTTCTCCGGGCCGTCTCTACCGTTTCGCTTTCATCCTCTGTACTTTTACCTTCGTTCATGTAGCATCGTAGAATAAGTTGGGCGATGACCGTGTTGTGTTGTGCCTTCTCCTGATTGTTAAGT                                                                                                                    ]
[-] EMBL CF335335             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCTCAGGTTCAGCCAGATGTTTCAGCTGGTGCCCAACGAGCAGGGAAGCTTCTTCGTGCAGAATGACATATTTCGGCTCAACTACGGCTAGCAGCAGGTTGCGTGTGGCTGCCGAAAGGAACAGGGTGCTAGGATGCTTTGGGCCCATGTGGATGCGAGATTGCGAGAAGCTTTTCCGGGCCGTCTCTACCGTTTCGCTTTCATCCTCTGTACTTTTACCTTCGTTCATGTGGCATCGTAGAATAAGTTGGGCGATGACCGTGTTGTGTTGTGCCTTCTCCTGATTGTTAAGTAATTCCGTGGAACGATTGAAATCTCCATGCATGGGCTACCGGTTTACATCCATTTAGACAAGAAAACCATTTTTTTACAGTTACACAGGANAATATGTGTACTATCCCAAAAAAAA]


>consensus_6528#0 ATCGTTCGTCCCATCCGTCAGCGCGCGTACAAATAGCCGGCGCGCCCGCGGCGAGCGTTT CGTACTCTGTCTGTTCTGCCGCACGAGACACGAGAGCCACGGATAGCTAGACACAGACGG CGCGCGGAGACAGGGGCAATGGACGGGCATGGGAAGGAGGGCAGCAGCAACGGCGCCAGC GGCGGCGGCGGCGGCGGCTGGAGCGATCAGTGCGACGTGGTGGCCAGGGCCTTCGTGGAG TACTACTACCAGACGTTCGACACCAACCGCGCCGCGCTCGCCGCGCTCTACGGCCAGACG TCCATGCTCTCCTTCGAGGGACACATGGTGGCCGGCGCCGAGGAGATCGGCCGGAAGCTG TTGGGGCTGCCCTTCGAGCAATGCCGGCACGCCGTCTGCACCGTCGACTGCCAACCCACG CCGTCCTTCCCGGGAGGCATCCTCGTCTTCGTCAGTGGCAACCTCCAGCTCGCCGGCGAG GAGCACCAGCTCAGGTTCAGCCAGATGTTTCAGCTGGTGCCCAACGAGCAGGGAAGCTTC TTCGTGCAGAATGACATATTCCGGCTCAACTACGGCTAGCAGCAGGTTGCGTGTGGCTGC CGAAAGGAACAGGGTGCTAGGATGCTTTGGGCCCATGTGGATGCGAGATTGCGAGAAGCT TCTCCGGGCCGTCTCTACCGTTTCGCTTTCATCCTCTGTACTTTTACCTTCGTTCATGTA GCATCGTAGAATAAGTTGGGCGATGACCGTGTTGTGTTGTGCCTTCTCCTGATTGTTAAG TAATTCCGTGGAACGATTGAAATCTCCATGCATGGGCTACCGGTTTACATCCATTTAGAC AAGAAAACCATTTTTTTACAGTTACACAGGANAATATGTGTACTATCCCAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)