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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6534 cluster # 6534       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6534#0 length = 546 sequences # 4  

consensusID : consensus_6534#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 546
fasta sequence
                              [GGAAATATCAGCATCTGCAAAAATCATCTCAGATTCGTTCGCCATGGCGAGGATCCCGTTCGCCGCCATCGTCGTCGCCATCCTCTCTTTCGCCATCGCCGCGGCTGCACAGGCGCCCGCGCCGTCTCCCACCAGCGACGGGACGTCGGTGGATCAAGGGATCGCATACC-TGCTGATGATCGTGGCGCTGGTGCTCACCTACCTCATCCACCCTCTCGACGCCTCCTCCGCCTACAAG-CTCTTCT-GAGCTT-ATGCAGAGATCTC-TTCGTCGCCATGGTGTTCCTTCTCCTTCTTGGATCTCCTCCTCCTCCCTTTTGATAGTCTAGTGGTGGATCTCTCATTCTCGGTGTAATTAATTAGTGGGATTTTTATATTCTTTTTCAGCTCGCGTTCGTTTGTAATTTGGGTCGGTGGTACTGCGCTGAGGATCGATTTCGCATTGTGTATATCATTCATCATTCTTTGCTGTTCTCAAAAACATTTGTATCATGTTGGGAAATTTGTTTTATCCCTNAGTTTTGGNNTAAAAAAAAAAAAAAACAAAAA]

[+] EMBL AK062517             [GGAAATATCAGCATCTGCAAAAATCATCTCAGATTCGTTCGCCATGGCGAGGATCCCGTTCGCCGCCATCGTCGTCGCCATCCTCTCTTTCGCCATCGCCGCGGCTGCACAGGCGCCCGCGCCGTCTCCCACCAGCGACGGGACGTCGGTGGATCAAGGGATCGCATACC TGCTGATGATCGTGGCGCTGGTGCTCACCTACCTCATCCACCCTCTCGACGCCTCCTCCGCCTACAAG CTCTTCT GAGCTT ATGCAGAGATCTC TTCGTCGCCATGGTGTTCCTTCTCCTTCTTGGATCTCCTCCTCCTCCCTTTTGATAGTCTAGTGGTGGATCTCTCATTCTCGGTGTAATTAATTAGTGGGATTTTTATATTCTTTTTCAGCTCGCGTTCGTTTGTAATTTGGGTCGGTGGTACTGCGCTGAGGATCGATTTCGCAT                                                                                                          ]
[+] EMBL OSC932               [               TGCAAAAATCATCTCAGATTCGTTCGCCATGGCGAGGATCCCGTTCGCCGCCATCGTCGTCGCCATCCTCTCTTTCGCCATCGCCGCGGCTGCACAGGCGCCCGCGCCGTCTCCCACCAGCGACGGGACGTCGGTGGATCAAGGGATCGCATACC TGCTGATGATCGTGGCGCTGGTGCTCACCTACCTCATCCACCCTCTCGACGCCTCCTCCGCCTACAAG CTCTTCT GAGCTT ATGCAGAGATCTC TTCGTCGCCATGGTGTTCCTTCTCCTTCTTGGATCTCCTCCTCCTCCCTTTTGATAGTCTAGTGGTGGATCTCTCATTCTCGGTGTAATTAATTAGTGGGATTTTTATATTCTTTTTCAGCTCGCGTTCGTTTGTAATTTGGGTCGGTGGTACTGCGCTGAGGATCGATTTCGCATTGTGTATATCATTCATCATTCTTTGCTGTTCTCAAAAA                                                                    ]
[+] EMBL AU058310             [               TGCAAAAATCATCTCAGATTCGTTCGCCATGGCGAGGATCCCGTTCGCCGCCATCGTCGTCGCCATCCTCTCTTTCGCCATCGCCGCGGCTGCACAGGCGCCCGCGCCGTCTCCCACCAGCGACGGGACGTNGTTGGATCAAGGGATCGCATACCTTGCTGATGATCGTGGCGCTGGTGCTCACCTACCTCATCCACCCTCTCGACGCCTTCTTCGCTTACAAGTCT TTCTGGAGCTTAATGCAGA ATCTCTTTCGNCG CATGGNG TCCTTCTCCTCCTTGat                                                                                                                                                                                                                                                         ]
[+] EMBL AU166178             [                                                                                                                                                                                                                                                                                                                                                   CTCTCATTCTCGGTGTAATTAATTAGTGGGATTTTTATATTCTTTTTCAGCTCGCGTTCGTTTGTAATTTGGGTCGGTGGTACTGCGCTGAGGATCGATTTCGCATTGTGTATATCATTCATCATTCTTTGCTGTTCTCATATGCATTTGTATCATGTTGGGAAATTTGTTTTATCCCTNAGTTTTGGNNTAAAAAAAAAAAAAAACAAAAA]


>consensus_6534#0 GGAAATATCAGCATCTGCAAAAATCATCTCAGATTCGTTCGCCATGGCGAGGATCCCGTT CGCCGCCATCGTCGTCGCCATCCTCTCTTTCGCCATCGCCGCGGCTGCACAGGCGCCCGC GCCGTCTCCCACCAGCGACGGGACGTCGGTGGATCAAGGGATCGCATACCTGCTGATGAT CGTGGCGCTGGTGCTCACCTACCTCATCCACCCTCTCGACGCCTCCTCCGCCTACAAGCT CTTCTGAGCTTATGCAGAGATCTCTTCGTCGCCATGGTGTTCCTTCTCCTTCTTGGATCT CCTCCTCCTCCCTTTTGATAGTCTAGTGGTGGATCTCTCATTCTCGGTGTAATTAATTAG TGGGATTTTTATATTCTTTTTCAGCTCGCGTTCGTTTGTAATTTGGGTCGGTGGTACTGC GCTGAGGATCGATTTCGCATTGTGTATATCATTCATCATTCTTTGCTGTTCTCAAAAACA TTTGTATCATGTTGGGAAATTTGTTTTATCCCTNAGTTTTGGNNTAAAAAAAAAAAAAAA CAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)