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Oryza sativa
cluster # 6547 cluster # 6547       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6547#0 length = 778 sequences # 4  

consensusID : consensus_6547#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 778
fasta sequence
                              [GGCGCTCCAACATCAGAACACCACAATGTTCAAGGTCCAGAATTATATTGACGGAAAGTTCCAAGACGCGTTGAGCGGAAAGTGGCTCGATAATTATGAGCCCGCGACTGGCAAGGTCTATTCACACGTTGCGGATTCTGATGAGACAGATCTGCAACTCGCTTATCAAGCGGCTAAGAAGGCCTTTGCTACTTGGTCGAAATTAACCAAGGAAACACGAGCATCTTATTTAAACAAAATCGCAGACGGGATCGAGAAGAGATTTGACGAATTTGCTGCCGCCGAAGCCAAGGATACAGGAAAGCCGTTGACATTGGCTAAAAATATGGACATTTCAAGAGCGATCGCGAACTTTAGATTCTTTGCTGGTGCCGTGTTGCACCACGAAGAAATGTCAACTGAAATGGACGGCGTGGCTATCAATTACACCGTCAGACAGCCAGTTGGCGTAGTTGGTCTCATCTCGCCGTGGAATCTTCCTCTTTATTTGTTGTCTTGGAAGGTCGCTCCTGCTATTTCAGTCGGCAACACCGTCATATGCAAGCCTAGCGAGATGACATCTGTCACGGCCTGGTTGATGTGCCAAGTCATGCAAGAAGTCGGTCTGCCGCAAGGTGTCGTTAACGTAGTCAACGGCTACGGTCACAAAGCTGGTCAGGCTATGGTCGTGCACGAAGACATTCGTTTGATGTCATTCACTGGTGGCACCCAAGACGGCCGAGTCGATCATCAAGAGCAGAGCTCCTTTCTTACAAAAGTTGTCGGTCGAATTGGGGGG]

[+] EMBL CB966317             [GGCGCTCCAACATCAGAACACCACAATGTTCAANGTCCAGAATTATATTGACGGAAAG TCCAAGACGCG TGAGCGGAAAGTGGCTCGATAATTATGAGCCCGCGACTGGCAAGGTCTATTCACACGTTGCGGATTCTGATGAGACAGATCTGCAACTCGCTTATCAAGCGGCTAAGAAGGCCTTTGCTACTTGGTCGAAATTAACCAAGGAAACACGAGCATCTTATTTAAACAAAATCGCAGACGGGATCGAGAAGAGATTTGACGAATTTGCTGCCGCCGAAGCCAAGGATACAGGAAAGCCGTTGACATTGGCTAAAAATATGGACATTTCAAGAGCGATCGCGAACTTTAGATTCTTTGCTGGTGCCGTGTTGCACCACGAAGAAATGTCAACTGAAATGGACGGCGTGGCTATCAATTACACCGTCAGACAGCCAGTTGGCGTAGTTGGTCTCATCTCGCCGTGGAATCTTCCTCTTTATTTGTTGTCTTGGAAGGTCGCTCCTGCTATTTCAGTCGGCAACACCGTCATATGCAAGCCTAGCGAGATGACATCTGTCACGGCCTGGTTGATGTGCCAAGTCATGCAAGAAGTCGGTCTGCCGCAAGGTGTCGTTAACGTAG                                                                                                                                                     ]
[+] EMBL BI306113             [               GAACACCACAATGTTCAAGGTCCAGAATTATATTGACGGAAAGTTCCAAGACGCGTTGAGCGGAAAGTGGCTCGATAATTATGAGCCCGCGACTGGCAAGGTCTATTCACACGTTGCGGATTCTGATGAGACAGATCTGCAACTCGCTTATCAAGCGGCTAAGAAGGCCTTTGCTACTTGGTCGAAATTAACCAAGGAAACACGAGCATCTTATTTAAACAAAATCGCAGACGGGATCGAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BU673735             [                           GTTCAA GTCCAGAATTATATTGACGGAAAGTTCCAAGACGCGTTGAGCGGAAAGTGGCTCGATAATTATGAGCCCGCGACTGGCAAGGTCTATTCACACGTTGCGGATTCTGATGAGACAGATCTGCAACTCGCTTATCAAGCGGCTAAGAAGGCCTTTGCTACTTGGTCGAAATTAACCAAGGAAACACGAGCATCTTATTTAAACAAAATCGCAGACGGGATCGAGAAGAGATTTGACGAATTTGCTGCCGCCGAAGCCAAGGATACAGGAAAGCCGTTGACATTGGCTAAAAATATGGACATTTCAAGAGCGATCGCGAACTTTAGATTCTTTGCTGGTGCCGTGTTGCACCACGAAGAAATGTCAACTGAAATGGACGGCGTGGCTATCAATTACACCGTCAGACAGCCAGTTGGCGTAGTTGGTCTCATCTCGCCGTGGAATCTTCCTCTTTATTTGTTGTCTTGGAAGGTCGCTCCTGCTATTTCAGTCGGCAACACCGTCATATGCAAGCCTAGCGAGATGACATCTGTCACGGCCTGGTTGATGTGCCAAGTCATGCAAGAAGTCGGTCTGCCGCAAGGTGTCGTTAACGTAGTCAACGGCTACGGTCACAAAGCTGGTCAGGCTATGGTCGTGCACGAAGACATTCGTTTGATGTCATTCACTGGTGGCACCCAAGACGGCCGAGTCGATCATCAAGAGCAGAGCTCCTTTCTTACAAAAGTTGTCGGTCGAATTGGGGGG]
[+] EMBL CB966703             [                           GTTCAAGGTCCAGAATTATATTGACGGAAAGTTCCAAGACGCGTTGAGCGGAAAG GGCTCGATAATTATGAGCCCGCGACTGGCAAGGTCTATTCACACGTTGCGGATTCTGATGAGACAGATCTGCAACTCGCTTATCAAGCGGCTAAGAAGGCCTTTGCTACTTGGTCGAAATTAACCAAGGAAACACGAGCATCTTATTTAAACAAAATCGCAGACGGGATCGAGAAGAGATTTGACGAATTTGCTGCCGCCGAAGCCAAGGATACAGGAAAGCCGTTGACATTGGCTAAAAATATGGACATTTCAAGAGCGATCGCGAACTTTAGATTCTTTGCTGGTGCCGTGTTGCACCACGAAGAAATGTCAACTGAAATGGACGGCGTGGCTATCAATTACACCGTCAGACAGCCAGTTGGCGTAGTTGGTCTCATCTCGCCGTGGAATCTTCCTCTTTATTTGTTGTCTTGGAAGGTCGCTCCTGCTATTTCAGTCGGCAACACCGTCATATGCAAGCCTAGCGAGATGACATCTGTCACGGCCTGGTTGATGTGCCAAGTCATGCAAGAAGTCGGTCTGCCGCAAGGTGTCGTTAACGTAGTCAACGGCTACGGTCACAAAGCTGGTCAGGCTATGGTCGTGCACGAAGACATTCGTTTGATTTC                                                                                     ]


>consensus_6547#0 GGCGCTCCAACATCAGAACACCACAATGTTCAAGGTCCAGAATTATATTGACGGAAAGTT CCAAGACGCGTTGAGCGGAAAGTGGCTCGATAATTATGAGCCCGCGACTGGCAAGGTCTA TTCACACGTTGCGGATTCTGATGAGACAGATCTGCAACTCGCTTATCAAGCGGCTAAGAA GGCCTTTGCTACTTGGTCGAAATTAACCAAGGAAACACGAGCATCTTATTTAAACAAAAT CGCAGACGGGATCGAGAAGAGATTTGACGAATTTGCTGCCGCCGAAGCCAAGGATACAGG AAAGCCGTTGACATTGGCTAAAAATATGGACATTTCAAGAGCGATCGCGAACTTTAGATT CTTTGCTGGTGCCGTGTTGCACCACGAAGAAATGTCAACTGAAATGGACGGCGTGGCTAT CAATTACACCGTCAGACAGCCAGTTGGCGTAGTTGGTCTCATCTCGCCGTGGAATCTTCC TCTTTATTTGTTGTCTTGGAAGGTCGCTCCTGCTATTTCAGTCGGCAACACCGTCATATG CAAGCCTAGCGAGATGACATCTGTCACGGCCTGGTTGATGTGCCAAGTCATGCAAGAAGT CGGTCTGCCGCAAGGTGTCGTTAACGTAGTCAACGGCTACGGTCACAAAGCTGGTCAGGC TATGGTCGTGCACGAAGACATTCGTTTGATGTCATTCACTGGTGGCACCCAAGACGGCCG AGTCGATCATCAAGAGCAGAGCTCCTTTCTTACAAAAGTTGTCGGTCGAATTGGGGGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)