cluster # 6553

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Oryza sativa
cluster # 6553 cluster # 6553 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6553#0 length = 1775 sequences # 4
consensusID : consensus_6553#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1775
fasta sequence
                              [TCTTCGCGAAAACGAAAGAAAAGGAGAGGCAAGAACAAGAACATCTCATCCCCAATTCCCCTCTCCCTAAACCCTAATCCCGTCCGATTCGCCCCCACCGGCCTCCAAGATCGAAGCTCTTTCGGCATCTCCGGCTGGTCGGAGAGGAGCTGCGCGTGGAGGGGGGGACTCTCGATTCCGGTGAGAAAACGGCGCGACCCTTCTCCCGATTTCGCGATTTCGGTACCGTACGGTTGCTCGTCGGCGTCGGATCCGGACGCGTGTGGGCGGCGAAAGGTTGGCCCTCGCGGTTGATTTGGTGGTGGCGCGGTGTCTGAGATGGTTGCGTGAGCCATTCGGAGAGGACAAGGTCGAGGAGGAGCAGCAGCTTCTGTTCGTGGCATTTCTGTTGCAAAGATTAGTGCTCCATTTCTCTGCAACCTCGCGCGGGG----GGGAGGGGGGGAGGGCGTTTGATCCATTTCTCCATTTCGGGCGGTTTCCAATGGCTCGAATCCATGCCGACCCGGTGCTGGAGGCCGACCAATTCGACCGGCTGCCGGACTCGCTTGTGCTGGTGATCCTCAACAATGTCGAGGATGTGCGCTCGCTCGGCCGGTGCTCCGCCGTGTCAAAGCGGTTCTACGGGCTCGTGCCCCTCGTCCATGATGTCTATGTCAAGATCGACCGCGTCGTGACGGTCGACGGCGAAGCTGAGGACGCGCTTAACCTGTCC-TCGCCGAAGCCGAGGAACATCC-TCTCGCATTTCCTCAAGATGATGCTGTTCACGATCATCAAGCCGTTCCACAGCATGCGCGGCCCGAACGGTGCTGGGCGGCCGCTGTTCCCGCAGCTCGCGCAGCACTCGCCGGCGCAGGTGCTCCGGAACTTCACGCACATCCGGAATCTGCGGGTGGAGCTGCCCTCGGGGGATGTGGGGACTGAGGAGGGAGTTCTCCTGAAATGGCGAGCGGAGTATGGGAGTACGCTTCAGAATTGTGTGATTCTTGGGGGTACTCAGGTCGACCGCAAGCCTGTTGGTGCAGAGCATGAGCTGTATTCGGAGGACAATGGAAGCATGCCGGAATCCTTCTATACCAATGGAGGGTTGAAACTCCGCGTCGTGTGGACAATCAGCTCTCTGATTGCGGCATCAACGAGACATTATCTTCTTCGGTCAATTATCAAGGATCATCCCACTCTTACAAGCTTGGTACTGACCGATGCTGATGGCCAGGGCACATTGTCCATGGGAGCGGAGCAGCTTAAGGAATTTAGGGAGAACCAGTTGTCGGCCTCAGCATGTTCTAACAGGACTCAGGTTCCAGCATGCAACATGAAGCTCAAATACGCTCCATATCTTGAGCTTCCTGGCGGCATTGCGTTGCAAGGTGCAACGTTGGTCGCTATCAAGCCCTCACCCGAGGGAAGCAATGGCGGTCATACTAGCCGCAAGGAAACGGATGCATTTGTCTCCGGAGCATTTGATGGACCATTCAAGTTTGCTGTGAAGGCGCTGATGAAGAGGCGAACTTACCTTCTGGAGATGAATGGCTTCTAGATATCTTGTGCTGTTACTGGGTACCTAGCTTGTTGGTCCAGGCAGTCATCTAGTTACTTTTAACTTCTGGTCTATGTAATAGGTTGTGCTTTGCTCTCTGTTGTATTAGCTCTCTGTACAGTGGTGACATTCTGTTGGTTATATGGAAATCATATCAAGTTAGTGTATCTTTCTCATTGCTCTCCCAATGCCATGTCATGATTTTATGCAACTAACATCATGCAAGCTGATTGTTTGC]

[+] EMBL AK071818             [TCTTCGCGAAAACGAAAGAAAAGGAGAGGCAAGAACAAGAACATCTCATCCCCAATTCCCCTCTCCCTAAACCCTAATCCCGTCCGATTCGCCCCCACCGGCCTCCAAGATCGAAGCTCTTTCGGCATCTCCGGCTGGTCGGAGAGGAGCTGCGCGTGGAGGGGGGGACTCTCGATTCCGGTGAGAAAACGGCGCGACCCTTCTCCCGATTTCGCGATTTCGGTACCGTACGGTTGCTCGTCGGCGTCGGATCCGGACGCGTGTGGGCGGCGAAAGGTTGGCCCTCGCGGTTGATTTGGTGGTGGCGCGGTGTCTGAGATGGTTGCGTGAGCCATTCGGAGAGGACAAGGTCGAGGAGGAGCAGCAGCTTCTGTTCGTGGCATTTCTGTTGCAAAGATTAGTGCTCCATTTCTCTGCAACCTCGCGCGGGG    GGGAGGGGGGGAGGGCGTTTGATCCATTTCTCCATTTCGGGTGGTTTCCAATGGCTCGAATCCATGCCGACCCGGTGCTGGAGGCCGACCAATTCGACCGGCTGCCGGACTCGCTTGTGCTGGTGATCCTCAACAATGTCGAGGATGTGCGCTCGCTCGGCCGGTGCTCCGCCGTGTCGAAGCGGTTCTACGGGCTCGTGCCCCTCGTCCATGATGTCTATGTCAAGATCGACCGCGTCGTGACGGTCGACGGCGAAGCTGAGGACGCGCTTAACCTGTCC TCGCCGAAGCCGAGGAACATCC TCTCGCATTTCCTCAAGATGATGCTGTTCACGATCATCAAGCCGTTCCACAGCATGCGCGGCCCGAACGGTGCTGGGCGGCCGCTGTTCCCGCAGCTCGCGCAGCACTCGCCGGCGCAGGTGCTCCGGAACTTCACGCACATCCGGAATCTGCGGGTGGAGCTGCCCTCGGGGGATGTGGGGACTGAGGAGGGAGTTCTCCTGAAATGGCGAGCGGAGTATGGGAGTACGCTTCAGAATTGTGTGATTCTTGGGGGTACTCAGGTCGACCGCAAGCCTGTTGGTGCAGAGCATGAGCTGTATTCGGAGGACAATGGAAGCATGCCGGAATCCTTCTATACCAATGGAGGGTTGAAACTCCGCGTCGTGTGGACAATCAGCTCTCTGATTGCGGCATCAACGAGACATTATCTTCTTCGGTCAATTATCAAGGATCATCCCACTCTTACAAGCTTGGTACTGACCGATGCTGATGGCCAGGGCACATTGTCCATGGGAGCGGAGCAGCTTAAGGAATTTAGGGAGAACCAGTTGTCGGCCTCAGCATGTTCTAACAGGACTCAGGTTCCAGCATGCAACATGAAGCTCAAATACGCTCCATATCTTGAGCTTCCTGGCGGCATTGCGTTGCAAGGTGCAACGTTGGTCGCTATCAAGCCCTCACCCGAGGGAAGCAATGGCGGTCATACTAGCCGCAAGGAAACGGATGCATTTGTCTCCGGAGCATTTGATGGACCATTCAAGTTTGCTGTGAAGGCGCTGATGAAGAGGCGAACTTACCTTCTGGAGATGAATGGCTTCTAGATATCTTGTGCTGTTACTGGGTACCTAGCTTGTTGGTCCAGGCAGTCATCTAGTTACTTTTAACTTCTGGTCTATGTAATAGGTTGTGCTTTGCTCTCTGTTGTATTAGCTCTCTGTACAGTGGTGACATTCTGTTGGTTATATGGAAATCATATCAAGTTAGTGTATCTTTCTCATTGCTCTCCCAATGCCATGTCATGATTTTATGCAACTAACATCATGCAAGCTGATTGTTTGC]
[-] EMBL BI306086             [                                                                                                                                                              cAGGGGGGGACTCTCGATTCCGGTGAGAAAACGGCGCGACCCTTCTCCCGATTTCGCGATTTCGGTACCGTACGGTTGCTCGTCGGCGTCGGATCCGAACGCGTGTGGACGGCGAAAGGTTGGCCCTCGCGGTTGATTTGGTGGTGGCGCGGTGTCTGAGATGGTTGCGTGAGCCATTCGGAGAGGACAAGGTCGAGGAGGAGCAGCAGCTTCTGTTCGTGGCATTTCTGTTGCAAAGATTAGTGCTCCATTTCTCTGCAACCTCGCGCGGGGGGTAGGGGGGGGGGGAGGGCGTTTGATCCATTTCTCCATTTCGGGCGGTTTCCAATGGCTCGAATCCATGCCGACCCGGTGCTGGAGGCCGACCAATTCGACCGGCTGCCGGACTCGCTTGTGCTGGTGATCCTCAACAATGTCGAGGATGTGCGCTCGCTCGGCCGGTGCTCCGCCGTGTCAAAGCGGTTCTACGGGCTCGTGCCCCTCGTCCATGATGTCTATGTCAAGATCGACCGCGTCGTGACGGTCGACGGCGAAGCTGAGGACGCGCTTAACCTGTCC TCGCCGAAGCCGAGGAACATCC TCTCGCATTTCCTCAAGATGATGCTGTTCACGATCATCAAGCCGTTCCACAGCATGCGCGGCCCGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB965568             [                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGGAGGGCGTTTGATCCATTTCTCCATTTCGGGCGGTTTCCAATGGCTCGAATCCATGCCGACCCGGTGCTGGAGGCCGACCAATTCGACCGGCTGCCGGACTCGCTTGTGCTGGTGATCCTCAACAATGTCGAGGATGTGCGCTCGCTCGGCCGGTGCTCCGCCGTGTCAAAGCGGTTCCACGGGCGCGTGCCCCGCGTCCATGATGTCTATGTCAAGACCGACCGCGTCGTGACGGGCGACGGCGAAGCTGAGGACGCGCGTAACCGGTCCGTCGCCGAAGCCGAGGAACATCCGTCTCGCATTTCCTCAAGATGATGCTGTTCACGATCATCAAGCCGTTCCACAGCATGCGCGGCCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA767428             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATTGCGGCATCAACGAGACATTATCTTCTTCGGTCAATTATCAAGGATCATCCCACTCTTACAAGCTTGGTACTGACCGATGCTGATGGCCAGGGCACATTGTCCATGGGAGTGGAGCAGCTTAAGGAATTTAGGGAGAACCAGTTGTCGGCCTCAGCATGTTCTAACAGGACTCAGGTTCCAGCATGCAACATGAAGCTCAAATACGCTCCATATCTTGAGCTTCCTGGCGGCATTGCGTTGCAAGGTGCAACGTTGGTCGCTATCAAGCCCTCACCCGAGGGAAGCAATGGCGGTCATACTAGCCGCAAGGAAACGGATGCATTTGTCTCCGGAGCATTTGATGGACCATTCAAGTTTGCTGTGAAGGCGCTGATGAAGAGGCGAACTTACCTTCTGGAGATGAATGGCTTCTAAATATCTTGTGCTGTTACTGGGTACCTAGCTTGTTGGTCCAGGCAGTCATCTGGTTACTTTTAACTTCTGGTCTATGTAATAGGTTGTGCTTTGCTCTCTGTTGTATTAGNTCTCTGTACAGTGGTGACATTCTGTTGGTTATATGGAAATCATATC                                                                                  ]




>consensus_6553#0
TCTTCGCGAAAACGAAAGAAAAGGAGAGGCAAGAACAAGAACATCTCATCCCCAATTCCC
CTCTCCCTAAACCCTAATCCCGTCCGATTCGCCCCCACCGGCCTCCAAGATCGAAGCTCT
TTCGGCATCTCCGGCTGGTCGGAGAGGAGCTGCGCGTGGAGGGGGGGACTCTCGATTCCG
GTGAGAAAACGGCGCGACCCTTCTCCCGATTTCGCGATTTCGGTACCGTACGGTTGCTCG
TCGGCGTCGGATCCGGACGCGTGTGGGCGGCGAAAGGTTGGCCCTCGCGGTTGATTTGGT
GGTGGCGCGGTGTCTGAGATGGTTGCGTGAGCCATTCGGAGAGGACAAGGTCGAGGAGGA
GCAGCAGCTTCTGTTCGTGGCATTTCTGTTGCAAAGATTAGTGCTCCATTTCTCTGCAAC
CTCGCGCGGGGGGGAGGGGGGGAGGGCGTTTGATCCATTTCTCCATTTCGGGCGGTTTCC
AATGGCTCGAATCCATGCCGACCCGGTGCTGGAGGCCGACCAATTCGACCGGCTGCCGGA
CTCGCTTGTGCTGGTGATCCTCAACAATGTCGAGGATGTGCGCTCGCTCGGCCGGTGCTC
CGCCGTGTCAAAGCGGTTCTACGGGCTCGTGCCCCTCGTCCATGATGTCTATGTCAAGAT
CGACCGCGTCGTGACGGTCGACGGCGAAGCTGAGGACGCGCTTAACCTGTCCTCGCCGAA
GCCGAGGAACATCCTCTCGCATTTCCTCAAGATGATGCTGTTCACGATCATCAAGCCGTT
CCACAGCATGCGCGGCCCGAACGGTGCTGGGCGGCCGCTGTTCCCGCAGCTCGCGCAGCA
CTCGCCGGCGCAGGTGCTCCGGAACTTCACGCACATCCGGAATCTGCGGGTGGAGCTGCC
CTCGGGGGATGTGGGGACTGAGGAGGGAGTTCTCCTGAAATGGCGAGCGGAGTATGGGAG
TACGCTTCAGAATTGTGTGATTCTTGGGGGTACTCAGGTCGACCGCAAGCCTGTTGGTGC
AGAGCATGAGCTGTATTCGGAGGACAATGGAAGCATGCCGGAATCCTTCTATACCAATGG
AGGGTTGAAACTCCGCGTCGTGTGGACAATCAGCTCTCTGATTGCGGCATCAACGAGACA
TTATCTTCTTCGGTCAATTATCAAGGATCATCCCACTCTTACAAGCTTGGTACTGACCGA
TGCTGATGGCCAGGGCACATTGTCCATGGGAGCGGAGCAGCTTAAGGAATTTAGGGAGAA
CCAGTTGTCGGCCTCAGCATGTTCTAACAGGACTCAGGTTCCAGCATGCAACATGAAGCT
CAAATACGCTCCATATCTTGAGCTTCCTGGCGGCATTGCGTTGCAAGGTGCAACGTTGGT
CGCTATCAAGCCCTCACCCGAGGGAAGCAATGGCGGTCATACTAGCCGCAAGGAAACGGA
TGCATTTGTCTCCGGAGCATTTGATGGACCATTCAAGTTTGCTGTGAAGGCGCTGATGAA
GAGGCGAACTTACCTTCTGGAGATGAATGGCTTCTAGATATCTTGTGCTGTTACTGGGTA
CCTAGCTTGTTGGTCCAGGCAGTCATCTAGTTACTTTTAACTTCTGGTCTATGTAATAGG
TTGTGCTTTGCTCTCTGTTGTATTAGCTCTCTGTACAGTGGTGACATTCTGTTGGTTATA
TGGAAATCATATCAAGTTAGTGTATCTTTCTCATTGCTCTCCCAATGCCATGTCATGATT
TTATGCAACTAACATCATGCAAGCTGATTGTTTGC
clustalw multiple alignements is not computed in this case