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Oryza sativa
cluster # 6560 cluster # 6560       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6560#0 length = 674 sequences # 4  

consensusID : consensus_6560#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 674
fasta sequence
                              [GCTCGGTTCGAGCGAGAAGTACCAGCTGATGCGCGGCGCGCGCAAGTGGTTCCCAAGGACGCCGACGGCCTCGACGAGCCGCAGAAGAAGCTGCTGCCGGAAATCTTCGCGAACAGCCAGAAGCTGCATACGTACTTCCAGCTGCGCCAGGATCTCGCCGCGATCTGGGATCGCTCGACCGCATCGCGCGAACAGCTTCTCGCGCAATTGCAGGATTGGTGCCATCGCGCAGAACAAAGCGGCATCAAGGCGCTGCAGGAATTCGCGACACGCCTGCGTCGCTACGCCTGATTCGAAATCGATTAGAATCTGAGGACGTCACAAACCCCGCGTTGGC-GGGGTTTTTTCATTTGGGCCGCCCGTTTTCGAGGGGGCGATCAGACGATCCGCAGGGCTGCGCCTTGCATGGGATTTGAGCCAGGCGCTGCGCGCCAACTCGGATCGACCGCAAAGCATGGGGTCCAGGCAAGCGCTGAAGCGCGAATTTGGGTCGACTGCAAAGCATGGGGCTCAGGCAAGCGCTAAAGCGCTAACTTGGGTCGACCGCAAAGCATGGGACCCAAGTAAGCGCTAAAGCGCCAACTTGGGCCGACCGCAAAGCATGGGACCCAAGTAAGCGCTAAAGCGCTAACTTGGGTCGACAGGAGATATGGAGATGCAATCGACGATCAAAC]

[+] EMBL CF339612             [GCTCGGTTCGAGCGAGAAGTACCAGCTGATGCGCGGCGCGCGCAAGTGGTTCCCAAGGACGCCGACGGCCTCGACGAGCCGCAGAAGAAGCTGCTGCCGGAAATCTTCGCGAACAGCCAGAAGCTGCATACGTACTTCCAGCTGCGCCAGGATCTCGCCGCGATCTGGGATCGCTCGACCGCATCGCGCGAACAGCTTCTCGCGCAATTGCAGGATTGGTGCCATCGCGCAGAACAAAGCGGCATCAAGGCGCTGCAGGAATTCGCGACACGCCTGCGTCGCTACGCCTGATTCGAAATCGATTAGAATCTGAGGACGTCACAAACCCCGCGTTGGC GGGGTTTTTTCATTTGGGCCGCCCGTTTTCGAGGGGGCGATCAGACGATCCGCAGGGCTGCGCCTTGCATGGGATTTGAGCCAGGCGCTGCGCGCCAACTCGGATCGACCGCAAAGCATGGGGTCCAGGCAAGCGCTGAAGCGCGAATTTGGGTCGACTGCAAAGCATGGGGCTCAGGCAAGCGCTAAAGCGCTAACTTGGGTCGACCGCAAAGCATGGGACCCAAGTAAGCGCTAAAGCGCCAACTTGGGCCGACCGCAAAGCATGGGACCCAAGTAAGCGCTAAAGCGCTAACTTGGGTCGACAGGAGATATGGAGATGCAATCGACGATCAAAC]
[+] EMBL CF339580             [ CTCGGTTCGAGCGAGAAGTACCAGCTGATGCGCGGCGCGCGCAAGTGGTTCCCAAGGACGCCGACGGCCTCGACGAGCCGCAGAAGAAGCTGCTGCCGGAAATCTTCGCGAACAGCCAGAAGCTGCATACGTACTTCCAGCTGCGCCAGGATCTCGCCGCGATCTGGGATCGCTCGACCGCATCGCGCGAACAGCTTCTCGCGCAATTGCAGGATTGGTGCCATCGCGCAGAACAAAGCGGCATCAAGGCGCTGCAGGAATTCGCGACACGCCTGCGTCGCTACGCCTGATTCGAAATCGATTAGAATCTGAGGACGTCACAAACCCCGCGTTGGCGGGGGTTTTTTCATTTGGGCCGCCCGTTTTCGAGGGGGCGATCAGACGATCCGCAGGGCTGCGCCTTGCATGGGATTTGAGCCAGGCGCTGCGCGCCAACTCGGATCGACCGCAAAGCATGGGGTCCAGGCAAGCGCTGAAGCGCGAATTTGGGTCGACTGCAAAGCATGGGGCTC                                                                                                                                                                  ]
[+] EMBL CF338908             [                                  GGCGCGCGCAAGTGGTTCCACAGGACGCCGACGGCCTCGACGAGCCGCAGAAGAAGCTGCTGCCGGAAATCTTCGCGAACAGCCAGAAGCTGCATACGTACTTCCAGCTGCGCCAGGATCTCGCCGCGATCTGGGATCGCTCGACCGCATCGCGCGAACAGCTTCTCGCGCAATTGCAGGATTGGTGCCATCGCGCAGAACAAAGCGGCATCAAGGCGCTGCAGGAATTCGCGACACGCCTGCGTCGCTACGCCTGATTCGAAATCGATTAGAATCTGAGGACGTCACAAACCCCGCGTTGGC GGGGTTTTTTCATTTGGGCCGCCCGTTTTCGAGGGGGCGATCAGACGATCCGCAGGGCTGCGCCTTGCATGGGATTTGAGCCAGGCGCTGCGCGCCAACTCGGATCGACCGCAAAGCATGGGGTCCAGGCAAGCGCTGAAGCGCGAATTTGGGTCGACTGCAAAGCATGGGGCTCAGGCAAGCGCTAAAGCGCTAACTTGGGTCGACCGCAAAGCATGGGACCCAAGTAAGCGCTAAAGCGCCAACTTGGGCCGACCGCAAAGCATGGGACCCAAGTAAGCGCTAAAGCGCTAACTTGGGTCGACAGGAGATATGGAGATGCAATCGACGATCAAA ]
[+] EMBL CF338634             [                                  GGCGCGCGCAAGTGGTTCCCTTTGACGCCGACGGCCTCGACGAGCCGCAGAAGAAGCTGCTGCCGGAAATCTTCGCGAACAGCCAGAAGCTGCATACGTACTTCCAGCTGCGCCAGGATCTCGCCGCGATCTGGGATCGCTCGACCGCATCGCGCGAACAGCTTCTCGCGCAATTGCAGGATTGGTGCCATCGCGCAGAACAAAGCGGCATCAAGGCGCTGCAGGAATTCGCGACACGCCTGCGTCGCTACGCCTGATTCGAAATCGATTAGAATCTGAGGACGTCACAAACCCCGCGTTGGCGGGGGTTTTTTCATTTGGGCCGCCCGTTTTCGAGGGGGCGATCAGACGATCCGCAGGGCTGCGCCTTGCATGGGATTTGAGCCAGGCGCTGCGCGCCAACTCGGATCGACCGCAAAGCATGGGGTCCAGGCAAGCGCTGAAGCGCGAATNTGGGTCGACTGCAAAGCATGGGGCTCAGGCAAGCGCTAAAGCGCTAACTTGGGTCGACCGCAAAGCATGGGACCCAAGTAAGCGCTA                                                                                                     ]


>consensus_6560#0 GCTCGGTTCGAGCGAGAAGTACCAGCTGATGCGCGGCGCGCGCAAGTGGTTCCCAAGGAC GCCGACGGCCTCGACGAGCCGCAGAAGAAGCTGCTGCCGGAAATCTTCGCGAACAGCCAG AAGCTGCATACGTACTTCCAGCTGCGCCAGGATCTCGCCGCGATCTGGGATCGCTCGACC GCATCGCGCGAACAGCTTCTCGCGCAATTGCAGGATTGGTGCCATCGCGCAGAACAAAGC GGCATCAAGGCGCTGCAGGAATTCGCGACACGCCTGCGTCGCTACGCCTGATTCGAAATC GATTAGAATCTGAGGACGTCACAAACCCCGCGTTGGCGGGGTTTTTTCATTTGGGCCGCC CGTTTTCGAGGGGGCGATCAGACGATCCGCAGGGCTGCGCCTTGCATGGGATTTGAGCCA GGCGCTGCGCGCCAACTCGGATCGACCGCAAAGCATGGGGTCCAGGCAAGCGCTGAAGCG CGAATTTGGGTCGACTGCAAAGCATGGGGCTCAGGCAAGCGCTAAAGCGCTAACTTGGGT CGACCGCAAAGCATGGGACCCAAGTAAGCGCTAAAGCGCCAACTTGGGCCGACCGCAAAG CATGGGACCCAAGTAAGCGCTAAAGCGCTAACTTGGGTCGACAGGAGATATGGAGATGCA ATCGACGATCAAAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)