Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 657 cluster # 657       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_657#0 length = 1618 sequences # 2  

consensusID : consensus_657#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1618
fasta sequence
                              [GCTTCTTCGCTTCGCCGCCTCCTCCCCCTCTCTCCGGCGCGTTCGCCGCTCGCGATCCTCCCGGCGCCGCCGCCGCCGCCGCGCGGGGGCCCTACTCGCGTCGACGCCGGGAGGGGGACGCCGTACTCCCTCCTCCTCGCGTCGCCCCGCCCCGCCGCCGAGTGCGACGCCGCTCTCTCTCTCTCTCTCCTCGCGAGAAACCCTAGCTGGAGTTGAAGTGAGGGGCTCACTGAAGTGAGCGGAGTGCGGGGGCGTGGATGCTGCCGCGCTCCTCCGGCCAGATCTAGCTAGCAGGCCATGGCGATGCGGGGGGTCGATTTCAAGTGGTACGATGGATTCTTCCTCTCCATGCTCGCCACCAGCCTAATCATTGTCTCCATCAACTGGAAGAGGTATCGTCTCTGCGCCCACCCGTTGCACATATGGATCGTGGTTGACTACACCACCGTCTTCATCTTCCGCCTTCTCATGTTCGTCGATAATGGCCTTGCCGCCGGCATGGGATTGGATCTTGGATGGCAACAGAGATATGCTCGTTTTTGTGGGAGAATTGTTGTCTTGTCGGTTCTTGTGCTTCTTCTCTATCCCTTTCTTTGGGTTTGGACTGTGATAGGAACATTGTGGTTTAGCACTGCAAGAGGCTGTTTACCCGAGGAAGGACAAAAATGGGGCTTCCTTATATGGCTGCTTTTCAGCTACTGTGGTCTCGCCTGTATTGCGTGTGTGGCTGTTGGAAAGTGGCTAAGCCGAAGGCATGCTCTCCAGCAGAGGGCACAACAGGGAATACCAGTCTCTGAATATGGGGTTTTGGTTGACATGATCCGTGTGCCTGATTGGGCATTTGAGGCCGTTGGCTTGGAAATGAGAGGAATGGGCCAAGATACTGCATATCATCCTGGTCTTTATTTAACAGCTGCCCAAAGAGAGGCAGTTGAGGCACTGATTCAAGAACTCCCGAAGTTCAGACTGAAAGCTGTTCCTACAGACTGCAGTGAGTGTCCAATCTGCCTGGAGGAATTCCATGTTGGCAACGAGGTCCGTGGGCTCCCGTGCGCGCACAATTTCCATGTGGAGTGCATCGACCAGTGGCTCCGGCTGAATGTCAAGTGCCCCCGTTGCCGGTGCTCCGTCTTCCCCAACCTCGACCTGAGCGCGCTCAACAACCTCCGGCCATCCTCCGAGCCGGACCGGCCGTCGGCCAGCGAGGTGACAGCGGCGACGATGGCGCGGTACGTGAGGTCGTCGCAGCCGGCTGGGCAGAGCTACCTGCTGCGGCTGCAGGGGCTGCTGCTGCGGCAGGTGGTGGTTCGGCACGGCGGCGGCGACGACATGGCGAGCGCCGAGAACGGCGCTTCTCATGTGGCCGCCGCGGTGACCGCGCCGGCGACCACCGGCGGCGTGGAGAGCGAGCTGCCTAGCATAGTGGTTGACGGTGGGCATCAGCTGCCGGATCGCTGAAGCGCCCGGTGGACGGCGTGATGTAGACTGATAGTTATATGTGTGGGGAAGGGGAGGATCGAAGCTATGCAGCAGCATGTTTTTTTTTTCTTTGATCTTATCTCCTGTGTGCAGAGTGTATAAATATTATGTAAAGGAGATCATTATTGCAAGCTTTTGT]

[+] EMBL AK073253             [GCTTCTTCGCTTCGCCGCCTCCTCCCCCTCTCTCCGGCGCGTTCGCCGCTCGCGATCCTCCCGGCGCCGCCGCCGCCGCCGCGCGGGGGCCCTACTCGCGTCGACGCCGGGAGGGGGACGCCGTACTCCCTCCTCCTCGCGTCGCCCCGCCCCGCCGCCGAGTGCGACGCCGCTCTCTCTCTCTCTCTCCTCGCGAGAAACCCTAGCTGGAGTTGAAGTGAGGGGCTCACTGAAGTGAGCGGAGTGCGGGGGCGTGGATGCTGCCGCGCTCCTCCGGCCAGATCTAGCTAGCAGGCCATGGCGATGCGGGGGGTCGATTTCAAGTGGTACGATGGATTCTTCCTCTCCATGCTCGCCACCAGCCTAATCATTGTCTCCATCAACTGGAAGAGGTATCGTCTCTGCGCCCACCCGTTGCACATATGGATCGTGGTTGACTACACCACCGTCTTCATCTTCCGCCTTCTCATGTTCGTCGATAATGGCCTTGCCGCCGGCATGGGATTGGATCTTGGATGGCAACAGAGATATGCTCGTTTTTGTGGGAGAATTGTTGTCTTGTCGGTTCTTGTGCTTCTTCTCTATCCCTTTCTTTGGGTTTGGACTGTGATAGGAACATTGTGGTTTAGCACTGCAAGAGGCTGTTTACCCGAGGAAGGACAAAAATGGGGCTTCCTTATATGGCTGCTTTTCAGCTACTGTGGTCTCGCCTGTATTGCGTGTGTGGCTGTTGGAAAGTGGCTAAGCCGAAGGCATGCTCTCCAGCAGAGGGCACAACAGGGAATACCAGTCTCTGAATATGGGGTTTTGGTTGACATGATCCGTGTGCCTGATTGGGCATTTGAGGCCGTTGGCTTGGAAATGAGAGGAATGGGCCAAGATACTGCATATCATCCTGGTCTTTATTTAACAGCTGCCCAAAGAGAGGCAGTTGAGGCACTGATTCAAGAACTCCCGAAGTTCAGACTGAAAGCTGTTCCTACAGACTGCAGTGAGTGTCCAATCTGCCTGGAGGAATTCCATGTTGGCAACGAGGTCCGTGGGCTCCCGTGCGCGCACAATTTCCATGTGGAGTGCATCGACCAGTGGCTCCGGCTGAATGTCAAGTGCCCCCGTTGCCGGTGCTCCGTCTTCCCCAACCTCGACCTGAGCGCGCTCAACAACCTCCGGCCATCCTCCGAGCCGGACCGGCCGTCGGCCAGCGAGGTGACAGCGGCGACGATGGCGCGGTACGTGAGGTCGTCGCAGCCGGCTGGGCAGAGCTACCTGCTGCGGCTGCAGGGGCTGCTGCTGCGGCAGGTGGTGGTTCGGCACGGCGGCGGCGACGACATGGCGAGCGCCGAGAACGGCGCTTCTCATGTGGCCGCCGCGGTGACCGCGCCGGCGACCACCGGCGGCGTGGAGAGCGAGCTGCCTAGCATAGTGGTTGACGGTGGGCATCAGCTGCCGGATCGCTGAAGCGCCCGGTGGACGGCGTGATGTAGACTGATAGTTATATGTGTGGGGAAGGGGAGGATCGAAGCTATGCAGCAGCATGTTTTTTTTTTCTTTGATCTTATCTCCTGTGTGCAGAGTGTATAAATATTATGTAAAGGAGATCATTATTGCAAGCTTTTGT]
[+] EMBL CA755222             [                                                 TCGCGATCCTCCCGGCGCCGCCGCCGCCGCCGCGCGGGGGCCCTACTCGCGTCGACGCCGGGAGGGGGACGCCGTACTCCCTCCTCCTCGCGTCGCCCCGCCCCGCCGCCGAGTGCGACGCCGCTCTCTCTCTCTCTCTCCTCGCGAGAAACCCTAGCTGGAGTTGAAGTGAGGGGCTCACTGAAGTGAGCGGAGTGCGGGGGCGTGGATGCTGCCGCGCTCCTCCGGCCAGATCTAGCTAGCAGGCCATGGCGATGCGGGGGGTCGATTTCAAGTGGTACGATGGATTCTTCCTCTCCATGCTCGCCACCAGCCTAATCATTGTCTCCATCAACTGGAAGAGGTATCGTCTCTGCGCCCACCCGTTGCACATATGGATCGTGGTTGACTACACCACCGTCTTCATCTTCCGCCTTCTCATGTTCGTCGATNATGGCCTTGCCGCCGGCATGGGATTGGATCTTGGATGGCAACAGAGATATGCTCGTTTTTGTGGGAG ATTGTTGTCTTGTCGGTTCTTGTGCTTCTTCTCTATCCCTTTCTTTGGGTTTGGACTGTGATAGGAACATTGTGGTTTAGCACTGCAAGAGGCTGTTTACCCGAGG AGGACAAAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]


>consensus_657#0 GCTTCTTCGCTTCGCCGCCTCCTCCCCCTCTCTCCGGCGCGTTCGCCGCTCGCGATCCTC CCGGCGCCGCCGCCGCCGCCGCGCGGGGGCCCTACTCGCGTCGACGCCGGGAGGGGGACG CCGTACTCCCTCCTCCTCGCGTCGCCCCGCCCCGCCGCCGAGTGCGACGCCGCTCTCTCT CTCTCTCTCCTCGCGAGAAACCCTAGCTGGAGTTGAAGTGAGGGGCTCACTGAAGTGAGC GGAGTGCGGGGGCGTGGATGCTGCCGCGCTCCTCCGGCCAGATCTAGCTAGCAGGCCATG GCGATGCGGGGGGTCGATTTCAAGTGGTACGATGGATTCTTCCTCTCCATGCTCGCCACC AGCCTAATCATTGTCTCCATCAACTGGAAGAGGTATCGTCTCTGCGCCCACCCGTTGCAC ATATGGATCGTGGTTGACTACACCACCGTCTTCATCTTCCGCCTTCTCATGTTCGTCGAT AATGGCCTTGCCGCCGGCATGGGATTGGATCTTGGATGGCAACAGAGATATGCTCGTTTT TGTGGGAGAATTGTTGTCTTGTCGGTTCTTGTGCTTCTTCTCTATCCCTTTCTTTGGGTT TGGACTGTGATAGGAACATTGTGGTTTAGCACTGCAAGAGGCTGTTTACCCGAGGAAGGA CAAAAATGGGGCTTCCTTATATGGCTGCTTTTCAGCTACTGTGGTCTCGCCTGTATTGCG TGTGTGGCTGTTGGAAAGTGGCTAAGCCGAAGGCATGCTCTCCAGCAGAGGGCACAACAG GGAATACCAGTCTCTGAATATGGGGTTTTGGTTGACATGATCCGTGTGCCTGATTGGGCA TTTGAGGCCGTTGGCTTGGAAATGAGAGGAATGGGCCAAGATACTGCATATCATCCTGGT CTTTATTTAACAGCTGCCCAAAGAGAGGCAGTTGAGGCACTGATTCAAGAACTCCCGAAG TTCAGACTGAAAGCTGTTCCTACAGACTGCAGTGAGTGTCCAATCTGCCTGGAGGAATTC CATGTTGGCAACGAGGTCCGTGGGCTCCCGTGCGCGCACAATTTCCATGTGGAGTGCATC GACCAGTGGCTCCGGCTGAATGTCAAGTGCCCCCGTTGCCGGTGCTCCGTCTTCCCCAAC CTCGACCTGAGCGCGCTCAACAACCTCCGGCCATCCTCCGAGCCGGACCGGCCGTCGGCC AGCGAGGTGACAGCGGCGACGATGGCGCGGTACGTGAGGTCGTCGCAGCCGGCTGGGCAG AGCTACCTGCTGCGGCTGCAGGGGCTGCTGCTGCGGCAGGTGGTGGTTCGGCACGGCGGC GGCGACGACATGGCGAGCGCCGAGAACGGCGCTTCTCATGTGGCCGCCGCGGTGACCGCG CCGGCGACCACCGGCGGCGTGGAGAGCGAGCTGCCTAGCATAGTGGTTGACGGTGGGCAT CAGCTGCCGGATCGCTGAAGCGCCCGGTGGACGGCGTGATGTAGACTGATAGTTATATGT GTGGGGAAGGGGAGGATCGAAGCTATGCAGCAGCATGTTTTTTTTTTCTTTGATCTTATC TCCTGTGTGCAGAGTGTATAAATATTATGTAAAGGAGATCATTATTGCAAGCTTTTGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)