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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6586#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3599 fasta sequence
[TCCTCCACTCTCTCTTCCCCTTTCCCATGGTCAGTGCGAGCTGCAGGTAGGCGTCGCCTCTGCGAGAAGGCGCAGGCGGCGGTGTGCACGGCGTCCTCCCCTTCCCGATTCCGCCCGTACCCTCCTCCTCCGTGGCCTGTGCGGCCTGGCGCCGGCGTGCGCACGGCCGGCGAGGAGGTTTGGTGGGGGATCGATCGACGCGGCCAACCTCCTTCCATCTGCCTCCGTCTCGGTTCGAATCGAAAAAAAAATTAGGGGTTCAGTTGAACCCCGGCAATCCACGTTAGGTTGTGGAAGAAGCAGCCATGGATCCCTCAGGGCTCAACCTGCAGGGGAATCCTGCTGAGAACCAGGAGAGCTGGACCTCCGGCGTGTCAGTTGGGAGGGGCACCCCAAATTTGGGTGTTGGGACGGCCGTGGCAGGCCGGAGCTGCCCGTCATCAACATTGTTCCCGGGGTCCTCCCTGTCGTCGACGGCGTTGCTGAATACCATGCACGAGGGCTCCTTTCCACAGACAGCCTTGGTGGCGGGTTCCGTGAGCAGCGCCGATGAGCAGCATGGTGCGCCCCCCGTACGGCCATCCTACAACCTTCCTGCAGGATGCACGCAGGTGCCGATAAGTATTCTGGTGTTCCACAGGAGGCTGACGGGGAGGGGATCCAGGTGCCGGTCGCCGCAATCTCGTAGCTTTATGCCTGCTCCTGCACTGTCCGGTGTCTCAGAGGCAGATGGAGCTTATGGGCCGATTCCTCAAAGTGATTTCTTGTCGCTTCGAGGTCCATCTGAAGTTTTTCCTGGTGATATGGCAATGAATCATTCAGAACCGGCCACTTCATATGGGTACAATTCAGAGTATGCACCTATGCATCTTCAGCCAAATGGCTTATACACTGAAGCTTCCAACACTGAAAGTGAAAGAGAAGCTAGCCAACTGCAACAATCAGCGGAAGCTGTTATCTGTGACAGCCTCAGTAAGTTGGAATCGGCTATGGAGAAAATTCAGGGTCAAAATCCTCAAGAATCAAGTGGCTTAGTTGCAGAGGGTTCCGCTGATGATAACATTCACAAGTACCATCAGAAAGCTAAAAGGGCCAGGACACAAATCACTCACAGTGACAAAATAGACTTACCAACACAAGCTGTATCTGCATGCAAGGAAAAAACAATAACTCAGATAGAGATGCAGATTGCAGATGCTGAGAGAACTGAAGCACTCAAGGGTGAGGATGCCCCAGCACAAAAGCTGAAGACTCGAAGGAGAAAGCACAGGCCCAAGGTAATCCGTGAGGACAGGCCAGCCAAAAAGCAAATGGCCACAACATCAGAAGAAAAACCTCTCAATCAGAAACCCAAAAGAAAATATGTGCGGAAGAATAGAAACCCCAGTTCTTTGGAGAAGTGCGCAGAACCTTTTAGTGACCATTCAATTTCTAGAGAATCCAGAACTACCGTTAGAAGCAGCATTGCATCAGTTCGAAGAAGGCTGCAATTTGAGTTCGGGGAGCACGGGGTGCAGAGGGACCAATCATCAATGACCAATTCATGGTACCAAAACCAGGAGAAACCTGTTAATGCTGAGAGTTCTTTGTGCTCAGTGACTAAATCGTCCGTGCAGGTTGAACATGGACAGGAATTACACATGGAAAATTCACCAGAAGGGTTGTTTTTTGGCATCAACTCCAAACTGAACAAAATTTTAGATGAGTACATACATTTGCCAGAAGCCGCACCAAAACCTTCAGAGCAAATCCCACTGGCTGCTTCTGGTCATGTTAGCGAGGAACTAGCAAGGAAACAATATGATGTGAGACACACTCATGATCCTGATTCTACAAGTTATAATATAGAAAGGAGTGGTCTGATCACAACGAAAGGGCACAAAAAGGACCTAGACCTGAACTATTCTAACACAAATGGTTTTCAGATGTATTGTTCGGCTAGTTTGTTACCAGAAATGGACTCCACAAAGGGCAGTATGACTAAGGTATCAAAAATGGACAAGAACAAAAAACGACATTATGGAGGTGAGTCCTCCCTAGCTGGCACACAGAGCTCCATTATCATGAGAACTGCAGCTGAGATGCTAGCAGTTTACCAAGCTTGTGGTATTAAAAAGAAGCGATCGGCCCGAGTCCGCAGGAATTCCTTTCTTTCTGTTATGGATCTTGAGAAGAATACTTCACAAGAATCAACAAGATTGCCGCGGTCATGCATGGAGGCCCTGTATGAGAGTTCCTACATAAAATTTATGACCAAGAAACGTTCACAGAAGGCACGGCTCAACTCTCCCAATTCCATTCAACCAAATATAGATCAGAAAAACAGGTTTTCATCTGAAACAGTTTTTTCTGGAGGATTCAATGGATTGAAAAGATCAGAGGAAACTTTCCAGAAAACTTTACCTCAGATTCCAGATGATAAGAGGATCAACCTTGACATTCATTGCAAAGTACCAGTAGAAAGCTCACCAAATACATCAACGCCACCATATATGGATTACCTTCAAGGAGTTACATCAAAGTTTAGATACTTTGATTTGAACACTGAGCAGGTGCATAAAACTGAGATGCATTTGTCTCAAACCATGCCCTCTCTTTCTTCTTTAGGAGCAACAAATTATCTACCGAATGCTCTAGTCCCATATGTTGGTGGGGCGGTGGTTCCATATCAGACACAGTTTCATTTAGTCAAGAAGCAACGCCCTCGAGCTAAGGTTGACTTGGATTTTGAAACAACGAGAGTTTGGAACCTTCTGATGGGTAAAGCAGCTGACCCTGTAGATGGAACTGATGTTGATAAAGAGAGATGGTGGAAACAAGAAAGAGAAGTTTTTCAAGGTCGTGCTAATTCATTCATAGCACGTATGCGCCTAGTTCAAGGTGACAGGCGCTTTTCTCCTTGGAAAGGATCAGTAGTGGACTCTGTAGTAGGAGTTTTCCTCACACAGAATGTAGCGGATCATCTTTCCAGCTCTGCATACATGGCCCTTGCCGCAAGTTTTCCTACAGGGTCACATGGCAATTGTAATGATGGCATTGCTGGTCAGGACAATGAAGAAATCATTAGCACGAGTGCAGTAGGAGACAGAGGCACATTTGAATTCTTTTATAATGGGTCAAGACCAGATATAGGATTAAATTTTGAGTTCTCAATGGCCTGTGAGAAGATCCACATGGAACCAAAGGACAATACTACAGTTAATGAGTTAACTAAAGGTGAAAATTATTCTCTTCATTGCAAAGAATCAGCTGGAAGTCTTTGTGACCACGAGACAGAAATAGATCATAAAGCAAAATCAATATCAGATTTCTCTGCAGTAGAATTAACAGCATGTATGAAAAATCTACATGCGACACAGTTCCAGAAGGAGATATCATTATCCCAAAGTGTTGTAACTTCAGAGTCAATTCTTCAACCAGGATTACTTTTGAGTTCTGGGATGGATCATGCTCGTAGAAATTTTGTTGGTAGCATTAGTGACACAGCTTCTCAGCAGGTGGGAAGCAATTTTGATGATGGAAAATCATTAACAGGAAATGATGTCACAGCCAATGAAACTGAGTACCATGGAATCAAAGCAGCAGCAACAAATAATTAT]
[+] EMBL AK070640 [TCCTCCACTCTCTCTTCCCCTTTCCCATGGTCAGTGCGAGCTGCAGGTAGGCGTCGCCTCTGCGAGAAGGCGCAGGCGGCGGTGTGCACGGCGTCCTCCCCTTCCCGATTCCGCCCGTACCCTCCTCCTCCGTGGCCTGTGCGGCCTGGCGCCGGCGTGCGCACGGCCGGCGAGGAGGTTTGGTGGGGGATCGATCGACGCGGCCAACCTCCTTCCATCTGCCTCCGTCTCGGTTCGAATCGAAAAAAAAATTAGGGGTTCAGTTGAACCCCGGCAATCCACGTTAGGTTGTGGAAGAAGCAGCCATGGATCCCTCAGGGCTCAACCTGCAGGGGAATCCTGCTGAGAACCAGGAGAGCTGGACCTCCGGCGTGTCAGTTGGGAGGGGCACCCCAAATTTGGGTGTTGGGACGGCCGTGGCAGGCCGGAGCTGCCCGTCATCAACATTGTTCCCGGGGTCCTCCCTGTCGTCGACGGCGTTGCTGAATACCATGCACGAGGGCTCCTTTCCACAGACAGCCTTGGTGGCGGGTTCCGTGAGCAGCGCCGATGAGCAGCATGGTGCGCCCCCCGTACGGCCATCCTACAACCTTCCTGCAGGATGCACGCAGGTGCCGATAAGTATTCTGGTGTTCCACAGGAGGCTGACGGGGAGGGGATCCAGGTGCCGGTCGCCGCAATCTCGTAGCTTTATGCCTGCTCCTGCACTGTCCGGTGTCTCAGAGGCAGATGGAGCTTATGGGCCGATTCCTCAAAGTGATTTCTTGTCGCTTCGAGGTCCATCTGAAGTTTTTCCTGGTGATATGGCAATGAATCATTCAGAACCGGCCACTTCATATGGGTACAATTCAGAGTATGCACCTATGCATCTTCAGCCAAATGGCTTATACACTGAAGCTTCCAACACTGAAAGTGAAAGAGAAGCTAGCCAACTGCAACAATCAGCGGAAGCTGTTATCTGTGACAGCCTCAGTAAGTTGGAATCGGCTATGGAGAAAATTCAGGGTCAAAATCCTCAAGAATCAAGTGGCTTAGTTGCAGAGGGTTCCGCTGATGATAACATTCACAAGTACCATCAGAAAGCTAAAAGGGCCAGGACACAAATCACTCACAGTGACAAAATAGACTTACCAACACAAGCTGTATCTGCATGCAAGGAAAAAACAATAACTCAGATAGAGATGCAGATTGCAGATGCTGAGAGAACTGAAGCACTCAAGGGTGAGGATGCCCCAGCACAAAAGCTGAAGACTCGAAGGAGAAAGCACAGGCCCAAGGTAATCCGTGAGGACAGGCCAGCCAAAAAGCAAATGGCCACAACATCAGAAGAAAAACCTCTCAATCAGAAACCCAAAAGAAAATATGTGCGGAAGAATAGAAACCCCAGTTCTTTGGAGAAGTGCGCAGAACCTTTTAGTGACCATTCAATTTCTAGAGAATCCAGAACTACCGTTAGAAGCAGCATTGCATCAGTTCGAAGAAGGCTGCAATTTGAGTTCGGGGAGCACGGGGTGCAGAGGGACCAATCATCAATGACCAATTCATGGTACCAAAACCAGGAGAAACCTGTTAATGCTGAGAGTTCTTTGTGCTCAGTGACTAAATCGTCCGTGCAGGTTGAACATGGACAGGAATTACACATGGAAAATTCACCAGAAGGGTTGTTTTTTGGCATCAACTCCAAACTGAACAAAATTTTAGATGAGTACATACATTTGCCAGAAGCCGCACCAAAACCTTCAGAGCAAATCCCACTGGCTGCTTCTGGTCATGTTAGCGAGGAACTAGCAAGGAAACAATATGATGTGAGACACACTCATGATCCTGATTCTACAAGTTATAATATAGAAAGGAGTGGTCTGATCACAACGAAAGGGCACAAAAAGGACCTAGACCTGAACTATTCTAACACAAATGGTTTTCAGATGTATTGTTCGGCTAGTTTGTTACCAGAAATGGACTCCACAAAGGGCAGTATGACTAAGGTATCAAAAATGGACAAGAACAAAAAACGACATTATGGAGGTGAGTCCTCCCTAGCTGGCACACAGAGCTCCATTATCATGAGAACTGCAGCTGAGATGCTAGCAGTTTACCAAGCTTGTGGTATTAAAAAGAAGCGATCGGCCCGAGTCCGCAGGAATTCCTTTCTTTCTGTTATGGATCTTGAGAAGAATACTTCACAAGAATCAACAAGATTGCCGCGGTCATGCATGGAGGCCCTGTATGAGAGTTCCTACATAAAATTTATGACCAAGAAACGTTCACAGAAGGCACGGCTCAACTCTCCCAATTCCATTCAACCAAATATAGATCAGAAAAACAGGTTTTCATCTGAAACAGTTTTTTCTGGAGGATTCAATGGATTGAAAAGATCAGAGGAAACTTTCCAGAAAACTTTACCTCAGATTCCAGATGATAAGAGGATCAACCTTGACATTCATTGCAAAGTACCAGTAGAAAGCTCACCAAATACATCAACGCCACCATATATGGATTACCTTCAAGGAGTTACATCAAAGTTTAGATACTTTGATTTGAACACTGAGCAGGTGCATAAAACTGAGATGCATTTGTCTCAAACCATGCCCTCTCTTTCTTCTTTAGGAGCAACAAATTATCTACCGAATGCTCTAGTCCCATATGTTGGTGGGGCGGTGGTTCCATATCAGACACAGTTTCATTTAGTCAAGAAGCAACGCCCTCGAGCTAAGGTTGACTTGGATTTTGAAACAACGAGAGTTTGGAACCTTCTGATGGGTAAAGCAGCTGACCCTGTAGATGGAACTGATGTTGATAAAGAGAGATGGTGGAAACAAGAAAGAGAAGTTTTTCAAGGTCGTGCTAATTCATTCATAGCACGTATGCGCCTAGTTCAAGGTGACAGGCGCTTTTCTCCTTGGAAAGGATCAGTAGTGGACTCTGTAGTAGGAGTTTTCCTCACACAGAATGTAGCGGATCATCTTTCCAGCTCTGCATACATGGCCCTTGCCGCAAGTTTTCCTACAGGGTCACATGGCAATTGTAATGATGGCATTGCTGGTCAGGACAATGAAGAAATCATTAGCACGAGTGCAGTAGGAGACAGAGGCACATTTGAATTCTTTTATAATGGGTCAAGACCAGATATAGGATTAAATTTTGAGTTCTCAATGGCCTGTGAGAAGATCCACATGGAACCAAAGGACAATACTACAGTTAATGAGTTAACTAAAGGTGAAAATTATTCTCTTCATTGCAAAGAATCAGCTGGAAGTCTTTGTGACCACGAGACAGAAATAGATCATAAAGCAAAATCAATATCAGATTTCTCTGCAGTAGAATTAACAGCATGTATGAAAAATCTACATGCGACACAGTTCCAGAAGGAGATATCATTATCCCAAAGTGTTGTAACTTCAGAGTCAATTCTTCAACCAGGATTACTTTTGAGTTCTGGGATGGATCATGCTCGTAGAAATTTTGTTGGTAGCATTAGTGACACAGCTTCTCAGCAGGTGGGAAGCAATTTTGATGATGGAAAATCATTAACAGGAAATGATGTCACAGCCAATGAAACTGAGTACCATGGAATCAAAGCAGCAGCAACAAATAATTAT]
consensusID : consensus_6586#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2485 fasta sequence
[TCAGTGCGAGCTGCAGGTAGGCGTCGCCTCGGCGAGAAGGCGCAGGCGGCGGTGTGTACGGCGTCCTCCCCTTCCCGATTCCGCCCGTAGCCTCCTCCTCCGTGGCCAGTGTGGCCTGGCGCCGGCGTGCGCACAGCCGGCGAGGAGGTTTGGTGGGGGATCGATCGACGCGGCCAACCTCCTTCCATCTGCCTCCGTTTCGGTTCGAATCGAAAAAAAATTTAGGGGTTCAGTTGAACCCCGGCAATCCACGTTAGGTTGTGGAAGAAGCAGCCATGGATCCCTCAGGGCTCAACCTGCAGGGGAATCCTGCTGAGAACCAGGAGAGCTGGACCTCCGGCGTGTCAGTTGGGAGGGGCACCCCAAATTTGGGTGTTGGGACGGCCGTGGCAGGCCGGAGCTGCCCGCCATTGACATTGTTCCCGGGATCCTCCCTGTCGTCGACGGCGTTGCTGAACGCCATGCACGAGGGCTCCTTTCCACAGGCAGCCCTGGTGGCGGGTTCCGGGAGCAGCGCCGATGAGCAGCATGGTGGGCCCCCCGTACGGCCATCCTACAACCTTCCTGCAGGATGCACGCAGGTGCCGATAAGTATCCTGGTGTTCCACAGGAGGCTGACGGGGAGGGGATCCAGGCGTCGGAGCTTTATGCCGGCTCCTGCACTGTCCGGTGTTTCAGAGGCAGATGGAGCTTCTGGGCCGATTCCTCAAAGTGATTTCTTGTCGCTTGGAGGTCCATCTGAAGTTTTTGCAGGTGATTTGGCAATGAATCATTCAGAACCGGCCATTTCATATGGGTACAATTCAGAGCATGCACCTATGCTTCTTCAGCCAAATGGTTTATACACTGAAGCTTCCAACACTGAAAGTGAAAGAGAAGCTAGCCAACTGCAACAATCAGCGGAAGCTGTTATCTGTGACAGCCACAGTAAGTTGGAATCGGTTATGGAGAAAATTCAGGGTCAAAATCCTCAAGAATCAATTGGCTTGGTTGCAGAGGGTTCCACTGATGATAACATTCACAAGTACCATCAGAAAGCTAAAAGGGCCAGGACACAAATCACTCACAGTGACAAAATGGACTTACCAACACAAGCTGTATCTGCATGCAAGGAAAAAACACTAACTCAGATAGAGATGCAGATTGCAGATGCTGAGAGAACTGAAGCATTCAAGAGTGAGGATGCCCCAGCACAAAAGCTGAAGACTCGAAGGAGAAAGCACAGGCCCAAGGTAATCCGTGAGGACAGGCCAGCCAAAAAGCAAATGTCCACGACATCAAAAGAAAAACCTCTCAATCAGAAACCCAAAAGAAAATATGTGTGGAAGAATAGAAACCCCAGTTCTTTGGAGAAGTGCGCAGAGCCTTTTAGTGACCATTCAATTTCTAGAGAATCCAGAACTACTGTTAGAAGCAGCATTGCATCAGTTCGAAGAAGGCTGCAATTTGAGTTCGGGGAGCATGGGGTGCAGAGGGACCAATCATCAAGGACCAATTCATGGTACCGAAACCAGGAGAAACCTGTAAATGCTGAGAGTTCTTTGTGCTCAGTGACTAAATCATCCGTGCAGGTTGAACATGGGCAGGAATTACACATGGAAAATTCACCAGAAGGGTTGTTTTTTGGCATCAACTCCAAACTGAACAAAATTTTAGATGAGTACATACATTTGCCAGAGGCCGCACCAAAACCTTCAGAGGAAATCCCACTGGCTACTTCTGGTCATGTTAGCGAGGAACTAGCAAGGAAACAAGATGATGTGAGACACATTCATGATC-ACAACGAAAGGAGTGGTCTGATCACAACGAAACAGAACAAAAAGGACTTAGACCTGAACTATTCTAACACAAATGGTTTTCAGATGTATTGCTCGGCTAGTTTGTTACCAGAAATGGACTCCACAAAGGGCCGTATGACTAAGGTA-TCAAAAA-TGGACAAGAACCAAAAACGACATTATGGAGGTGAGTCCTCCCTAGCTGGCACACAGAGCTCCATTATCATGAGAACTGCAGCTGAGATGCTAGCAGTTTACCAAGCTTGTGGTATTAAAAAGAAGCGATCGGCCCGAGTCCGCAGGAATTCCTTTCTTTCTGTTATGGATCTTGAGAAGAATACTTCACAAGAATCAACAAGATTGCCGCGGTCATGCATGGAAGCCCTGTACGAGAGTTCCT-ACATAAACAGATGATAAGAGGATCAACCTTGACATTCATTGCGAAGTACCAGTAGAAAACTCACCAAATACATCAACGCCACCATATATGGATTACCATGCCCTCTCTTTCTTCTTTAGGAGCAACAAATTATTTGCCGAATGCTCTAGTCCCATATGTTGGTGGGGCGGTGGTTCCTTATCAGACACAATTTCATTTAGTCAAGAAGCAACGCCCTCGAGCTAAGGTTGACTTGGATTTTGAAACAACGAGAGTTTGGAACCTTCTGATGGGTAAAGCAGCTGACCCTGTAGATGGAACTGATGTTGAT]
[+] EMBL AK068137 [TCAGTGCGAGCTGCAGGTAGGCGTCGCCTCGGCGAGAAGGCGCAGGCGGCGGTGTGTACGGCGTCCTCCCCTTCCCGATTCCGCCCGTAGCCTCCTCCTCCGTGGCCAGTGTGGCCTGGCGCCGGCGTGCGCACAGCCGGCGAGGAGGTTTGGTGGGGGATCGATCGACGCGGCCAACCTCCTTCCATCTGCCTCCGTTTCGGTTCGAATCGAAAAAAAATTTAGGGGTTCAGTTGAACCCCGGCAATCCACGTTAGGTTGTGGAAGAAGCAGCCATGGATCCCTCAGGGCTCAACCTGCAGGGGAATCCTGCTGAGAACCAGGAGAGCTGGACCTCCGGCGTGTCAGTTGGGAGGGGCACCCCAAATTTGGGTGTTGGGACGGCCGTGGCAGGCCGGAGCTGCCCGCCATTGACATTGTTCCCGGGATCCTCCCTGTCGTCGACGGCGTTGCTGAACGCCATGCACGAGGGCTCCTTTCCACAGGCAGCCCTGGTGGCGGGTTCCGGGAGCAGCGCCGATGAGCAGCATGGTGGGCCCCCCGTACGGCCATCCTACAACCTTCCTGCAGGATGCACGCAGGTGCCGATAAGTATCCTGGTGTTCCACAGGAGGCTGACGGGGAGGGGATCCAGGCGTCGGAGCTTTATGCCGGCTCCTGCACTGTCCGGTGTTTCAGAGGCAGATGGAGCTTCTGGGCCGATTCCTCAAAGTGATTTCTTGTCGCTTGGAGGTCCATCTGAAGTTTTTGCAGGTGATTTGGCAATGAATCATTCAGAACCGGCCATTTCATATGGGTACAATTCAGAGCATGCACCTATGCTTCTTCAGCCAAATGGTTTATACACTGAAGCTTCCAACACTGAAAGTGAAAGAGAAGCTAGCCAACTGCAACAATCAGCGGAAGCTGTTATCTGTGACAGCCACAGTAAGTTGGAATCGGTTATGGAGAAAATTCAGGGTCAAAATCCTCAAGAATCAATTGGCTTGGTTGCAGAGGGTTCCACTGATGATAACATTCACAAGTACCATCAGAAAGCTAAAAGGGCCAGGACACAAATCACTCACAGTGACAAAATGGACTTACCAACACAAGCTGTATCTGCATGCAAGGAAAAAACACTAACTCAGATAGAGATGCAGATTGCAGATGCTGAGAGAACTGAAGCATTCAAGAGTGAGGATGCCCCAGCACAAAAGCTGAAGACTCGAAGGAGAAAGCACAGGCCCAAGGTAATCCGTGAGGACAGGCCAGCCAAAAAGCAAATGTCCACGACATCAAAAGAAAAACCTCTCAATCAGAAACCCAAAAGAAAATATGTGTGGAAGAATAGAAACCCCAGTTCTTTGGAGAAGTGCGCAGAGCCTTTTAGTGACCATTCAATTTCTAGAGAATCCAGAACTACTGTTAGAAGCAGCATTGCATCAGTTCGAAGAAGGCTGCAATTTGAGTTCGGGGAGCATGGGGTGCAGAGGGACCAATCATCAAGGACCAATTCATGGTACCGAAACCAGGAGAAACCTGTAAATGCTGAGAGTTCTTTGTGCTCAGTGACTAAATCATCCGTGCAGGTTGAACATGGGCAGGAATTACACATGGAAAATTCACCAGAAGGGTTGTTTTTTGGCATCAACTCCAAACTGAACAAAATTTTAGATGAGTACATACATTTGCCAGAGGCCGCACCAAAACCTTCAGAGGAAATCCCACTGGCTACTTCTGGTCATGTTAGCGAGGAACTAGCAAGGAAACAAGATGATGTGAGACACATTCATGATC ACAACGAAAGGAGTGGTCTGATCACAACGAAACAGAACAAAAAGGACTTAGACCTGAACTATTCTAACACAAATGGTTTTCAGATGTATTGCTCGGCTAGTTTGTTACCAGAAATGGACTCCACAAAGGGCCGTATGACTAAGGTA TCAAAAA TGGACAAGAACCAAAAACGACATTATGGAGGTGAGTCCTCCCTAGCTGGCACACAGAGCTCCATTATCATGAGAACTGCAGCTGAGATGCTAGCAGTTTACCAAGCTTGTGGTATTAAAAAGAAGCGATCGGCCCGAGTCCGCAGGAATTCCTTTCTTTCTGTTATGGATCTTGAGAAGAATACTTCACAAGAATCAACAAGATTGCCGCGGTCATGCATGGAAGCCCTGTACGAGAGTTCCT ACATAAA ]
[-] EMBL BQ906433 [ ttttttTGAGACACATTCATGATCGACAACGAAAGGAGTGGTCTGATCACAACGAAACGGAACAAAAAGGACTTAGACCTGAACTATTCTAACACAAATGGTTTTCAGATGTATTGCTCGGCTAGTTTGTTACCAGAAATGGACTCCACAAAGGGCCGTATGACTAAGGTAGTCAAAAAGTGGACAAGAACCAAAAACGACATTATGGAGGTGAGTCCTCCCTAGCTGGCACACAGAGCTCCATTATCATGAGAACTGCAGCTGAGATGCTAGCAGTTTACCAAGCTTGTGGTATTAAAAAGAAGCGATCGGCCCGAGTCCGCAGGAATTCCTcgg ]
[+] EMBL CB635342 [ TATTGGTCGGCTAGTTTGTTACCAGAAATGGACTCCACAAAGGGCCGTATGACTAAGGTA TCAAAAA TGGACAAGAACCAAAAACGACATTATGGAGGTGAGTCCTCCCTAGCTGGCACACAGAGCTCCATTATCATGAGAACTGCAGCTGAGATGCTAGCAGTTTACCAAGCTTGTGGTATTAAAAAGAAGCGATCGGCCCGAGTCCGCAGGAATTCCTTTCTTTCTGTTATGGATCTTGAGAAGAATACTTCACAAGAATCAACAAGATTGCCGCGGTCATGCATGGAAGCCCTGTACGAGAGTTCCTCAGAT TCCAGATGATAAGAGGATCAACCTTGACATTCATTGCGAAGTACCAGTAGAAAACTCACCAAATACATCAACGCCACCATATATGGATTACCATGCCCTCTCTTTCTTCTTTAGGAGCAACAAATTATTTGCCGAATGCTCTAGTCCCATATGTTGGTGGGGCGGTGGTTCCTTATCAGACACAATTTCATTTAGTCAAGAAGCAACGCCCTCGAGCTAAGGTTGACTTGGATTTTGAAACAACGAGAGTTTGGAACCTTCTGATGGGTAAAGCAGCTGACCCTGTAGATGGAACTGATGTTGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6586#0 TCCTCCACTCTCTCTTCCCCTTTCCCATGGTCAGTGCGAGCTGCAGGTAGGCGTCGCCTC 60
consensus_6586#1 ------------------------------TCAGTGCGAGCTGCAGGTAGGCGTCGCCTC 30
******************************
consensus_6586#0 TGCGAGAAGGCGCAGGCGGCGGTGTGCACGGCGTCCTCCCCTTCCCGATTCCGCCCGTAC 120
consensus_6586#1 GGCGAGAAGGCGCAGGCGGCGGTGTGTACGGCGTCCTCCCCTTCCCGATTCCGCCCGTAG 90
************************* ********************************
consensus_6586#0 CCTCCTCCTCCGTGGCCTGTGCGGCCTGGCGCCGGCGTGCGCACGGCCGGCGAGGAGGTT 180
consensus_6586#1 CCTCCTCCTCCGTGGCCAGTGTGGCCTGGCGCCGGCGTGCGCACAGCCGGCGAGGAGGTT 150
***************** *** ********************** ***************
consensus_6586#0 TGGTGGGGGATCGATCGACGCGGCCAACCTCCTTCCATCTGCCTCCGTCTCGGTTCGAAT 240
consensus_6586#1 TGGTGGGGGATCGATCGACGCGGCCAACCTCCTTCCATCTGCCTCCGTTTCGGTTCGAAT 210
************************************************ ***********
consensus_6586#0 CGAAAAAAAAATTAGGGGTTCAGTTGAACCCCGGCAATCCACGTTAGGTTGTGGAAGAAG 300
consensus_6586#1 CGAAAAAAAATTTAGGGGTTCAGTTGAACCCCGGCAATCCACGTTAGGTTGTGGAAGAAG 270
********** *************************************************
consensus_6586#0 CAGCCATGGATCCCTCAGGGCTCAACCTGCAGGGGAATCCTGCTGAGAACCAGGAGAGCT 360
consensus_6586#1 CAGCCATGGATCCCTCAGGGCTCAACCTGCAGGGGAATCCTGCTGAGAACCAGGAGAGCT 330
************************************************************
consensus_6586#0 GGACCTCCGGCGTGTCAGTTGGGAGGGGCACCCCAAATTTGGGTGTTGGGACGGCCGTGG 420
consensus_6586#1 GGACCTCCGGCGTGTCAGTTGGGAGGGGCACCCCAAATTTGGGTGTTGGGACGGCCGTGG 390
************************************************************
consensus_6586#0 CAGGCCGGAGCTGCCCGTCATCAACATTGTTCCCGGGGTCCTCCCTGTCGTCGACGGCGT 480
consensus_6586#1 CAGGCCGGAGCTGCCCGCCATTGACATTGTTCCCGGGATCCTCCCTGTCGTCGACGGCGT 450
***************** *** ************** **********************
consensus_6586#0 TGCTGAATACCATGCACGAGGGCTCCTTTCCACAGACAGCCTTGGTGGCGGGTTCCGTGA 540
consensus_6586#1 TGCTGAACGCCATGCACGAGGGCTCCTTTCCACAGGCAGCCCTGGTGGCGGGTTCCGGGA 510
******* ************************** ***** *************** **
consensus_6586#0 GCAGCGCCGATGAGCAGCATGGTGCGCCCCCCGTACGGCCATCCTACAACCTTCCTGCAG 600
consensus_6586#1 GCAGCGCCGATGAGCAGCATGGTGGGCCCCCCGTACGGCCATCCTACAACCTTCCTGCAG 570
************************ ***********************************
consensus_6586#0 GATGCACGCAGGTGCCGATAAGTATTCTGGTGTTCCACAGGAGGCTGACGGGGAGGGGAT 660
consensus_6586#1 GATGCACGCAGGTGCCGATAAGTATCCTGGTGTTCCACAGGAGGCTGACGGGGAGGGGAT 630
************************* **********************************
consensus_6586#0 CCAGGTGCCGGTCGCCGCAATCTCGTAGCTTTATGCCTGCTCCTGCACTGTCCGGTGTCT 720
consensus_6586#1 CCAGGCGTCGG---------------AGCTTTATGCCGGCTCCTGCACTGTCCGGTGTTT 675
***** * *** *********** ******************** *
consensus_6586#0 CAGAGGCAGATGGAGCTTATGGGCCGATTCCTCAAAGTGATTTCTTGTCGCTTCGAGGTC 780
consensus_6586#1 CAGAGGCAGATGGAGCTTCTGGGCCGATTCCTCAAAGTGATTTCTTGTCGCTTGGAGGTC 735
****************** ********************************** ******
consensus_6586#0 CATCTGAAGTTTTTCCTGGTGATATGGCAATGAATCATTCAGAACCGGCCACTTCATATG 840
consensus_6586#1 CATCTGAAGTTTTTGCAGGTGATTTGGCAATGAATCATTCAGAACCGGCCATTTCATATG 795
************** * ****** *************************** ********
consensus_6586#0 GGTACAATTCAGAGTATGCACCTATGCATCTTCAGCCAAATGGCTTATACACTGAAGCTT 900
consensus_6586#1 GGTACAATTCAGAGCATGCACCTATGCTTCTTCAGCCAAATGGTTTATACACTGAAGCTT 855
************** ************ *************** ****************
consensus_6586#0 CCAACACTGAAAGTGAAAGAGAAGCTAGCCAACTGCAACAATCAGCGGAAGCTGTTATCT 960
consensus_6586#1 CCAACACTGAAAGTGAAAGAGAAGCTAGCCAACTGCAACAATCAGCGGAAGCTGTTATCT 915
************************************************************
consensus_6586#0 GTGACAGCCTCAGTAAGTTGGAATCGGCTATGGAGAAAATTCAGGGTCAAAATCCTCAAG 1020
consensus_6586#1 GTGACAGCCACAGTAAGTTGGAATCGGTTATGGAGAAAATTCAGGGTCAAAATCCTCAAG 975
********* ***************** ********************************
consensus_6586#0 AATCAAGTGGCTTAGTTGCAGAGGGTTCCGCTGATGATAACATTCACAAGTACCATCAGA 1080
consensus_6586#1 AATCAATTGGCTTGGTTGCAGAGGGTTCCACTGATGATAACATTCACAAGTACCATCAGA 1035
****** ****** *************** ******************************
consensus_6586#0 AAGCTAAAAGGGCCAGGACACAAATCACTCACAGTGACAAAATAGACTTACCAACACAAG 1140
consensus_6586#1 AAGCTAAAAGGGCCAGGACACAAATCACTCACAGTGACAAAATGGACTTACCAACACAAG 1095
******************************************* ****************
consensus_6586#0 CTGTATCTGCATGCAAGGAAAAAACAATAACTCAGATAGAGATGCAGATTGCAGATGCTG 1200
consensus_6586#1 CTGTATCTGCATGCAAGGAAAAAACACTAACTCAGATAGAGATGCAGATTGCAGATGCTG 1155
************************** *********************************
consensus_6586#0 AGAGAACTGAAGCACTCAAGGGTGAGGATGCCCCAGCACAAAAGCTGAAGACTCGAAGGA 1260
consensus_6586#1 AGAGAACTGAAGCATTCAAGAGTGAGGATGCCCCAGCACAAAAGCTGAAGACTCGAAGGA 1215
************** ***** ***************************************
consensus_6586#0 GAAAGCACAGGCCCAAGGTAATCCGTGAGGACAGGCCAGCCAAAAAGCAAATGGCCACAA 1320
consensus_6586#1 GAAAGCACAGGCCCAAGGTAATCCGTGAGGACAGGCCAGCCAAAAAGCAAATGTCCACGA 1275
***************************************************** **** *
consensus_6586#0 CATCAGAAGAAAAACCTCTCAATCAGAAACCCAAAAGAAAATATGTGCGGAAGAATAGAA 1380
consensus_6586#1 CATCAAAAGAAAAACCTCTCAATCAGAAACCCAAAAGAAAATATGTGTGGAAGAATAGAA 1335
***** ***************************************** ************
consensus_6586#0 ACCCCAGTTCTTTGGAGAAGTGCGCAGAACCTTTTAGTGACCATTCAATTTCTAGAGAAT 1440
consensus_6586#1 ACCCCAGTTCTTTGGAGAAGTGCGCAGAGCCTTTTAGTGACCATTCAATTTCTAGAGAAT 1395
**************************** *******************************
consensus_6586#0 CCAGAACTACCGTTAGAAGCAGCATTGCATCAGTTCGAAGAAGGCTGCAATTTGAGTTCG 1500
consensus_6586#1 CCAGAACTACTGTTAGAAGCAGCATTGCATCAGTTCGAAGAAGGCTGCAATTTGAGTTCG 1455
********** *************************************************
consensus_6586#0 GGGAGCACGGGGTGCAGAGGGACCAATCATCAATGACCAATTCATGGTACCAAAACCAGG 1560
consensus_6586#1 GGGAGCATGGGGTGCAGAGGGACCAATCATCAAGGACCAATTCATGGTACCGAAACCAGG 1515
******* ************************* ***************** ********
consensus_6586#0 AGAAACCTGTTAATGCTGAGAGTTCTTTGTGCTCAGTGACTAAATCGTCCGTGCAGGTTG 1620
consensus_6586#1 AGAAACCTGTAAATGCTGAGAGTTCTTTGTGCTCAGTGACTAAATCATCCGTGCAGGTTG 1575
********** *********************************** *************
consensus_6586#0 AACATGGACAGGAATTACACATGGAAAATTCACCAGAAGGGTTGTTTTTTGGCATCAACT 1680
consensus_6586#1 AACATGGGCAGGAATTACACATGGAAAATTCACCAGAAGGGTTGTTTTTTGGCATCAACT 1635
******* ****************************************************
consensus_6586#0 CCAAACTGAACAAAATTTTAGATGAGTACATACATTTGCCAGAAGCCGCACCAAAACCTT 1740
consensus_6586#1 CCAAACTGAACAAAATTTTAGATGAGTACATACATTTGCCAGAGGCCGCACCAAAACCTT 1695
******************************************* ****************
consensus_6586#0 CAGAGCAAATCCCACTGGCTGCTTCTGGTCATGTTAGCGAGGAACTAGCAAGGAAACAAT 1800
consensus_6586#1 CAGAGGAAATCCCACTGGCTACTTCTGGTCATGTTAGCGAGGAACTAGCAAGGAAACAAG 1755
***** ************** **************************************
consensus_6586#0 ATGATGTGAGACACACTCATGATCCTGATTCTACAAGTTATAATATAGAAAGGAGTGGTC 1860
consensus_6586#1 ATGATGTGAGACACATTCATGATCACAAC------------------GAAAGGAGTGGTC 1797
*************** ******** * *************
consensus_6586#0 TGATCACAACGAAAGGGCACAAAAAGGACCTAGACCTGAACTATTCTAACACAAATGGTT 1920
consensus_6586#1 TGATCACAACGAAACAGAACAAAAAGGACTTAGACCTGAACTATTCTAACACAAATGGTT 1857
************** * *********** ******************************
consensus_6586#0 TTCAGATGTATTGTTCGGCTAGTTTGTTACCAGAAATGGACTCCACAAAGGGCAGTATGA 1980
consensus_6586#1 TTCAGATGTATTGCTCGGCTAGTTTGTTACCAGAAATGGACTCCACAAAGGGCCGTATGA 1917
************* *************************************** ******
consensus_6586#0 CTAAGGTATCAAAAATGGACAAGAACAAAAAACGACATTATGGAGGTGAGTCCTCCCTAG 2040
consensus_6586#1 CTAAGGTATCAAAAATGGACAAGAACCAAAAACGACATTATGGAGGTGAGTCCTCCCTAG 1977
************************** *********************************
consensus_6586#0 CTGGCACACAGAGCTCCATTATCATGAGAACTGCAGCTGAGATGCTAGCAGTTTACCAAG 2100
consensus_6586#1 CTGGCACACAGAGCTCCATTATCATGAGAACTGCAGCTGAGATGCTAGCAGTTTACCAAG 2037
************************************************************
consensus_6586#0 CTTGTGGTATTAAAAAGAAGCGATCGGCCCGAGTCCGCAGGAATTCCTTTCTTTCTGTTA 2160
consensus_6586#1 CTTGTGGTATTAAAAAGAAGCGATCGGCCCGAGTCCGCAGGAATTCCTTTCTTTCTGTTA 2097
************************************************************
consensus_6586#0 TGGATCTTGAGAAGAATACTTCACAAGAATCAACAAGATTGCCGCGGTCATGCATGGAGG 2220
consensus_6586#1 TGGATCTTGAGAAGAATACTTCACAAGAATCAACAAGATTGCCGCGGTCATGCATGGAAG 2157
********************************************************** *
consensus_6586#0 CCCTGTATGAGAGTTCCTACATAAAATTTATGACCAAGAAACGTTCACAGAAGGCACGGC 2280
consensus_6586#1 CCCTGTACGAGAGTTCCTACATAAA----------------------------------- 2182
******* *****************
consensus_6586#0 TCAACTCTCCCAATTCCATTCAACCAAATATAGATCAGAAAAACAGGTTTTCATCTGAAA 2340
consensus_6586#1 ------------------------------------------------------------
consensus_6586#0 CAGTTTTTTCTGGAGGATTCAATGGATTGAAAAGATCAGAGGAAACTTTCCAGAAAACTT 2400
consensus_6586#1 ------------------------------------------------------------
consensus_6586#0 TACCTCAGATTCCAGATGATAAGAGGATCAACCTTGACATTCATTGCAAAGTACCAGTAG 2460
consensus_6586#1 ------------CAGATGATAAGAGGATCAACCTTGACATTCATTGCGAAGTACCAGTAG 2230
*********************************** ************
consensus_6586#0 AAAGCTCACCAAATACATCAACGCCACCATATATGGATTACCTTCAAGGAGTTACATCAA 2520
consensus_6586#1 AAAACTCACCAAATACATCAACGCCACCATATATGGATTACC------------------ 2272
*** **************************************
consensus_6586#0 AGTTTAGATACTTTGATTTGAACACTGAGCAGGTGCATAAAACTGAGATGCATTTGTCTC 2580
consensus_6586#1 ------------------------------------------------------------
consensus_6586#0 AAACCATGCCCTCTCTTTCTTCTTTAGGAGCAACAAATTATCTACCGAATGCTCTAGTCC 2640
consensus_6586#1 -----ATGCCCTCTCTTTCTTCTTTAGGAGCAACAAATTATTTGCCGAATGCTCTAGTCC 2327
************************************ * ****************
consensus_6586#0 CATATGTTGGTGGGGCGGTGGTTCCATATCAGACACAGTTTCATTTAGTCAAGAAGCAAC 2700
consensus_6586#1 CATATGTTGGTGGGGCGGTGGTTCCTTATCAGACACAATTTCATTTAGTCAAGAAGCAAC 2387
************************* *********** **********************
consensus_6586#0 GCCCTCGAGCTAAGGTTGACTTGGATTTTGAAACAACGAGAGTTTGGAACCTTCTGATGG 2760
consensus_6586#1 GCCCTCGAGCTAAGGTTGACTTGGATTTTGAAACAACGAGAGTTTGGAACCTTCTGATGG 2447
************************************************************
consensus_6586#0 GTAAAGCAGCTGACCCTGTAGATGGAACTGATGTTGATAAAGAGAGATGGTGGAAACAAG 2820
consensus_6586#1 GTAAAGCAGCTGACCCTGTAGATGGAACTGATGTTGAT---------------------- 2485
**************************************
consensus_6586#0 AAAGAGAAGTTTTTCAAGGTCGTGCTAATTCATTCATAGCACGTATGCGCCTAGTTCAAG 2880
consensus_6586#1 ------------------------------------------------------------
consensus_6586#0 GTGACAGGCGCTTTTCTCCTTGGAAAGGATCAGTAGTGGACTCTGTAGTAGGAGTTTTCC 2940
consensus_6586#1 ------------------------------------------------------------
consensus_6586#0 TCACACAGAATGTAGCGGATCATCTTTCCAGCTCTGCATACATGGCCCTTGCCGCAAGTT 3000
consensus_6586#1 ------------------------------------------------------------
consensus_6586#0 TTCCTACAGGGTCACATGGCAATTGTAATGATGGCATTGCTGGTCAGGACAATGAAGAAA 3060
consensus_6586#1 ------------------------------------------------------------
consensus_6586#0 TCATTAGCACGAGTGCAGTAGGAGACAGAGGCACATTTGAATTCTTTTATAATGGGTCAA 3120
consensus_6586#1 ------------------------------------------------------------
consensus_6586#0 GACCAGATATAGGATTAAATTTTGAGTTCTCAATGGCCTGTGAGAAGATCCACATGGAAC 3180
consensus_6586#1 ------------------------------------------------------------
consensus_6586#0 CAAAGGACAATACTACAGTTAATGAGTTAACTAAAGGTGAAAATTATTCTCTTCATTGCA 3240
consensus_6586#1 ------------------------------------------------------------
consensus_6586#0 AAGAATCAGCTGGAAGTCTTTGTGACCACGAGACAGAAATAGATCATAAAGCAAAATCAA 3300
consensus_6586#1 ------------------------------------------------------------
consensus_6586#0 TATCAGATTTCTCTGCAGTAGAATTAACAGCATGTATGAAAAATCTACATGCGACACAGT 3360
consensus_6586#1 ------------------------------------------------------------
consensus_6586#0 TCCAGAAGGAGATATCATTATCCCAAAGTGTTGTAACTTCAGAGTCAATTCTTCAACCAG 3420
consensus_6586#1 ------------------------------------------------------------
consensus_6586#0 GATTACTTTTGAGTTCTGGGATGGATCATGCTCGTAGAAATTTTGTTGGTAGCATTAGTG 3480
consensus_6586#1 ------------------------------------------------------------
consensus_6586#0 ACACAGCTTCTCAGCAGGTGGGAAGCAATTTTGATGATGGAAAATCATTAACAGGAAATG 3540
consensus_6586#1 ------------------------------------------------------------
consensus_6586#0 ATGTCACAGCCAATGAAACTGAGTACCATGGAATCAAAGCAGCAGCAACAAATAATTAT 3599
consensus_6586#1 -----------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||