Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 659 cluster # 659       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_659#0 length = 448 sequences # 2  

consensusID : consensus_659#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 448
fasta sequence
                              [GNGNACCGGT-GGGTTCGAATACCCAACCTCTAAATCCTGGGCCCGCCACTGGATCATAATCCAACGGCCAGGTCCAGGTGACTGAAATGTGCCTAGCGAATCCTAACATATTCGTTCTTTGGCCCCGGCGATGAGTAGCAAGTTTATTACTCTCTCCGTTTCAGGTTATAAAACATTTTGACTTTGGTCAAAGACAAACTGTTTCAAGTTTAACTAAGTTAGTTTCATCAAATCAATAATTGAATATATTTTTATAATAAATTTATCTTGGGGTGAAAATGGTACTACCTTTTTCTACAAACTTGATCCGGACTTAAAACAATTTGCCTTTAACCAAAGNCACCAAAGNCAAAACGGCTTATAACCTAAACGGGGGGAGGGAGGACATGCCAGGTGTTGGGATTCCCTGNGGNTAATTAAAGGCATCATCAGTAAATCTATATATTTT]

[+] EMBL AU063292             [GNGNACCGGT GGGTTCGAATACCCAACCTCTAAATCCTGGGCCCGCCACTGGATCATAATCCAACGGCCAGGTCCAGGTGACTGAAATGTGCCTAGCGAATCCTAACATATTCGTTCTTTGGCCCCGGCGATGAGTAGCAAGTTTATTACTCTCTCCGTTTCAGGTTATAAAACATTTTGACTTTGGTCAAAGACAAACTGTTTCAAGTTTAACTAAGTTAGTTTCATCAAATCAATAATTGAATATATTTTTATAATAAATTTATCTTGGGGTGAAAATGGTACTACCTTTTTCTACAAACTTGATCCGGACTTAAAACAATTTGCCTTTAACCAAAGNCACCAAAGNCAAAACGGCTTATAACCTAAACGGGGGGAGGGAGGACATGCCAGGTGTTGGGATTCCCTGNGGNTAATTAAAGGCATCATCAGTAAATCTATATATTTT]
[+] EMBL C28271               [GNGNATCGGTNGGGTTCGAATACCCAACCTCTAAATCCTGGGCCCGCCACTGGATCATAATCCAACGGCCAGGTCCAGGTGACTGAAATGTGCCTAGCGAATCCTAACATATTCGTTCTTTGGCCCCGGCGATGAGTAGCAAGTTTATTACTCTCTCCGTTTCAGGTTATAAAACATTTTGACTTTGGTCAAAGACAAACTGTTTCAAGTTTAACTAAGTTAGTTTCATCAAATCAATAATTGAATATATTTTTATAATAAATTTATCTTGGGTTGAAAATGNTACTACCTTTNTCT                                                                                                                                                        ]


>consensus_659#0 GNGNACCGGTGGGTTCGAATACCCAACCTCTAAATCCTGGGCCCGCCACTGGATCATAAT CCAACGGCCAGGTCCAGGTGACTGAAATGTGCCTAGCGAATCCTAACATATTCGTTCTTT GGCCCCGGCGATGAGTAGCAAGTTTATTACTCTCTCCGTTTCAGGTTATAAAACATTTTG ACTTTGGTCAAAGACAAACTGTTTCAAGTTTAACTAAGTTAGTTTCATCAAATCAATAAT TGAATATATTTTTATAATAAATTTATCTTGGGGTGAAAATGGTACTACCTTTTTCTACAA ACTTGATCCGGACTTAAAACAATTTGCCTTTAACCAAAGNCACCAAAGNCAAAACGGCTT ATAACCTAAACGGGGGGAGGGAGGACATGCCAGGTGTTGGGATTCCCTGNGGNTAATTAA AGGCATCATCAGTAAATCTATATATTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)