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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6591 cluster # 6591       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6591#0 length = 831 sequences # 4  

consensusID : consensus_6591#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 831
fasta sequence
                              [AGACAAATTAAAGCATACAGCAATTGATTCAGAGTAGTTAGCTTAACTAGCTCCTCTGCTTTAATTAGTTTGCCCCTTCCAGGTAGAGTATATATGGGTAGTATAGGAGGAGTAGCGGTGGTGCTGGTGGGCATGGCGGCGATGCTGGTGGGCATGGCGTCGGCGGCGACCTACAACGTGGGCGAGCCGGGCGGCGC-AT-GGGATCTCACCACCAACTACACAAACTGGGTCGCCCAAAAGAGGTTCCATCCAGGCGACCAGATAGTGTTCAAGTACTCTGCTCAGCGGCACGACGTGGTGGAGGTGAACAAGGCGGGTTACGACTCGTGCTCCACCTCCACCTCCATCGCCACCCACACCACCGGCAACGACGTCATCCCCCTCACCTCCACCGGCACCCGCTACTTCATCTGTGGCTTCCCCGGTCACTGCACCACCACCGGCACCGGCAACATGAAGATCCAGATCGACGTCGTGCAGGCAGATTCCTCCTCCGCCCCGGCGCCTGTGGCCACCACTACTCCCCCTTCGCCGCCCTCCTCCGCCGCCACCTCCCTCAAGGCCACCGCCGCAGCTGCCGTCCTACTCGCCGCCCTCCTCATCATGGCTTAATTAATTAATACTCCTAGCTGCTAGCTTATTTGTTTTCTTTTCCGATCCTGAGAGAGCCATGTATACTACCAGTCCCAGCTAGCTTTTTGCTTGTATCCTCATCCA-TCCGGATTGATTGTACTTATATGATTAGTATTTTAGTCTTTAGAGGAGGCATTTGATTATATATATGTCTAGTACTATGTTGATTATCTCTCATGCATTATTATTATTTAATTA]

[+] EMBL AK063784             [AGACAAATTAAAGCATACAGCAATTGATTCAGAGTAGTTAGCTTAACTAGCTCCTCTGCTTTAATTAGTTTGCCCCTTCCAGGTAGAGTATATATGGGTAGTATAGGAGGAGTAGCGGTGGTGCTGGTGGGCATGGCGGCGATGCTGGTGGGCATGGCGTCGGCGGCGACCTACAACGTGGGCGAGCCGGGCGGCGC AT GGGATCTCACCACCAACTACACAAACTGGGTCGCCCAAAAGAGGTTCCATCCAGGCGACCAGATAGTGTTCAAGTACTCTGCTCAGCGGCACGACGTGGTGGAGGTGAACAAGGCGGGTTACGACTCGTGCTCCACCTCCACCTCCATCGCCACCCACACCACCGGCAACGACGTCATCCCCCTCACCTCCACCGGCACCCGCTACTTCATCTGTGGCTTCCCCGGTCACTGCACCACCACCGGCACCGGCAACATGAAGATCCAGATCGACGTCGTGCAGGCAGATTCCTCCTCCGCCCCGGCGCCTGTGGCCACCACTACTCCCCCTTCGCCGCCCTCCTCCGCCGCCACCTCCCTCAAGGCCACCGCCGCAGCTGCCGTCCTACTCGCCGCCCTCCTCATCATGGCTTAATTAATTAATACTCCTAGCTGCTAGCTTATTTGTTTTCTTTTCCGATCCTGAGAGAGCCATGTATACTACCAGTCCCAGCTAGCTTTTTGCTTGTATCCTCATCCA TCCGGATTGATTGTACTTATATGATTAGTATTTTAGTCTTTAGAGGAGGCATTTGATTATATATATGTCTAGTACTATGTTGATTATCTCTCATGCATTATTATTATTTAATTA]
[+] EMBL C27612               [   CAAATTAAAGCATACAGCAATTGATTCAGAGTAGTTAGCTTAACTAGCTCCTCTGCTTTAATTAGTTTGCCCCTTCCAGGTAGAGTATATATGGGTAGTATAGGAGGAGTAGCGGTGGTGCTGGTGGGCATGGCGGCGATGCTGGTGGGCATGGCGTCGGCGGCGACCTACAACGTGGGCGAGCCNGGC GCNCAATGGGGNTCTCACCACCAACTACACAAACTGGGTCGCCCAAAAGAGGTTCCATCCAGGCGACCAGATAGTGTTCAAGTACTCTGCTCAGCGGCACGACGTGGTGGAGGTGAACAAGGCGGGTTACGACTCGTGCTCCACCTCCACCTCCATCGCCACCCACACCACCGGCAACGACGTCATCCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BU666941             [                                                                                                                                                                                                                                                                                                                                                                                                    tgCCACCGGCACCCGCTACTTCGTCTGTGGCTTCCCCGGCCACTGCACCACCACCGGCACCGGCAACATGAAGATCCAGATCGACGTCGTGCAGGCAGATTCCTCCTCCGCCCCGGCGCCTGTGGCCACCACTACTCCCCCTTCGCCGCCCTCCTCCGCCGCCACCTCCCTCAAGGCCACCGCCGCAGCTGCCGTCCTACTC CCGCCCTCCTCATCATGGCTTAATTAATTAATACTCCTAGCTGCTAGCTTATTTGTTTTCTTTTCCGATCCTGAGAGAGCCATGTATACTACCAGTCCCAGCTAGCTTTTTGCTTGTATCCTCATCCACTCCGGATTGATTGTACTTATATGATTAGTATTTTAGTCTTTAGAGGAGGCCTTTGATTATATATATGTCTAGTATTATGTTGATTAaaaaaaaaa                   ]
[-] EMBL AW070059             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               gccgaggtACTTCCCTCAAGGCCACCGCCGCAGCTGCCGTCCTACTCGCCGCCCTCCTCATCATGGCTTAATTAATTAATACTCCTAGCTGCTAGCTTATTTGTTTTCTTTTCCGATCCTGAGAGAGCCATGTATACTACCAGTCCCAGCTAGCTTTTTGCTTGTATCCTCATCCA TCCGGATTGATTGTACTTATATGATTAGTATTTTAGTCTTTAGAGGAGGCATTTGATTATATATA                                                 ]


>consensus_6591#0 AGACAAATTAAAGCATACAGCAATTGATTCAGAGTAGTTAGCTTAACTAGCTCCTCTGCT TTAATTAGTTTGCCCCTTCCAGGTAGAGTATATATGGGTAGTATAGGAGGAGTAGCGGTG GTGCTGGTGGGCATGGCGGCGATGCTGGTGGGCATGGCGTCGGCGGCGACCTACAACGTG GGCGAGCCGGGCGGCGCATGGGATCTCACCACCAACTACACAAACTGGGTCGCCCAAAAG AGGTTCCATCCAGGCGACCAGATAGTGTTCAAGTACTCTGCTCAGCGGCACGACGTGGTG GAGGTGAACAAGGCGGGTTACGACTCGTGCTCCACCTCCACCTCCATCGCCACCCACACC ACCGGCAACGACGTCATCCCCCTCACCTCCACCGGCACCCGCTACTTCATCTGTGGCTTC CCCGGTCACTGCACCACCACCGGCACCGGCAACATGAAGATCCAGATCGACGTCGTGCAG GCAGATTCCTCCTCCGCCCCGGCGCCTGTGGCCACCACTACTCCCCCTTCGCCGCCCTCC TCCGCCGCCACCTCCCTCAAGGCCACCGCCGCAGCTGCCGTCCTACTCGCCGCCCTCCTC ATCATGGCTTAATTAATTAATACTCCTAGCTGCTAGCTTATTTGTTTTCTTTTCCGATCC TGAGAGAGCCATGTATACTACCAGTCCCAGCTAGCTTTTTGCTTGTATCCTCATCCATCC GGATTGATTGTACTTATATGATTAGTATTTTAGTCTTTAGAGGAGGCATTTGATTATATA TATGTCTAGTACTATGTTGATTATCTCTCATGCATTATTATTATTTAATTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)