Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6600 cluster # 6600       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6600#0 length = 1774 sequences # 2  
consensus_6600#1 length = 637 sequences # 1  
consensus_6600#2 length = 269 sequences # 1  

consensusID : consensus_6600#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1774
fasta sequence
                              [GCTCGTCTTCCCTCTCCCGACCCGCCACCCGCCTCCTCGCCGGTTTGATTTTTTTTTTCTTTTTGTTCACCCGGCCGGGCGGGGCGAGCTTGCGCTCTCTTTTCTTCCTTCCTTTTTCTTGGATTCTATTTCGGCTTTGGTTGTTCGGTCGGGGGGGGGGGGGGGGCGCAAGAATCGGAGTAGGAGGTCATGGTGGTTAGGGAAAAGCAAGGTGGCCGGATGGGGAAGGGGAAGGGGAAGGGGAAGGAGAAGGAGTGCGACATTAACTGCTTCGGGAGGAGCTTCTTCCGTGTGCTTCTCACCCTGCAATCTCTGGAGCGGATGAAAATCCCATCATCATTCAACCAATGCCTTCAGAATCAACCTACTGGGATGGTTTCTCTGGTTGATCGAAGTGGAAATAAATGGAGTGCAGAGCTGACTTCAGACTCTGAGGGATTCTTCTTTGTGCATGGATGGAAAGAATTTGTCAGAGATAACTCAATTCAGTGTGGTCAATTTTTAGTATTCACTTATGATAAACGGTCACAATTCTCAGTGACAGTCTTTGAACCTTCAGGCATTGACAAGATATCAACTTTCTCTGCTCACCCTTCCAAAAATGTGATCATTAAAACAGAAAGTGATGAAGGGGGCATGGTCACCGCAGCTATCACAACAGAGAAAATGGCTCCCGCCCTGAAGGAAAATAATGGAATCACAGGAAAGAGAACTAGAGATGTAGATTACCTTATGGAAGATAGGGTGGTTGTATTTAAGAAGTCATCTGAGGCTAATGTTTGCGAAAGTTCTAGGAGAAAACGTGCAGGAGCTTCCGCTGGCAAGTCCAAGGTAACATCGACAAGCCATAACAGTACCAGAGGTTCATCATGCAGCTCAGATGAAGATAATTCTTCTAGCAAGTCACCAAATCCACCATTCCTGATGCGCTTTCTGTCTGGTGAGGTGTCTCGGCGTGGTAGATGTGTTTCAAAGGGTCAAAGACAACTAACAGTAATATCACAGAGGCGTCCGGTAACTGAAGCAGAGAAGGACCATGCTCTTCAAAGGGCAAGAGAGTTTAAATCTAAGAATCCTTTTGCCGTGCAAATAATGATGGAGTCATATGTCTATGTTGGATTTTTCATGAATATCCCATGTGAATTTGTCCGTGAGTGTCTTCCCCATACCAACAAAAGGATCACACTCTGGGATCCACAAGGGAAGGCTTGGGAAGTTAACTATGTCTACTACAGTGATCGTTCTGTTGGTTCTTTCAGTGGTGGCTGGGGCAAATTTGCTGTTGGCAACAATCTGGAGAAGTTTGATGTGTGTGTCTTCGAGCTTGTCCAGAAGGATAACATAAAAGTGCACATCTACAGAGTTGTCCCAGAAATTACTCCGCACAAACTCCGTTCTGACCCGAAGTAACATTGCTATGTCGGCATGTTGGAGGCTTCAATTCCATTGATCTGAGGCTGTAGTTGGCAGTTAAAAAACTATTTATATGTTGGTTTCTATAAAAAAAAACAAAATAAGTGCCTAGTTCATAAGTGAACTATTGTTCCGGTTGGGTTGTTGAATGACTAGTTTAGACCTGGTTGTATTGGTTAAGGAGTGTACTATTGTTGCGGACGTGCAGCCATTGTAATGCTAAAATGTAACTTGCATTTTTTTTTGTGGCTGTATAATATTTTTACTGTTATGTTTCATGATATATGTCATAGATAGTTGATTTCATTCAGATTATCATCAAAGTATACTGGCCTGAGATCTGAAAACCAGATGGTGTGAT]

[+] EMBL AK067571             [GCTCGTCTTCCCTCTCCCGACCCGCCACCCGCCTCCTCGCCGGTTTGATTTTTTTTTTCTTTTTGTTCACCCGGCCGGGCGGGGCGAGCTTGCGCTCTCTTTTCTTCCTTCCTTTTTCTTGGATTCTATTTCGGCTTTGGTTGTTCGGTCGGGGGGGGGGGGGGGGCGCAAGAATCGGAGTAGGAGGTCATGGTGGTTAGGGAAAAGCAAGGTGGCCGGATGGGGAAGGGGAAGGGGAAGGGGAAGGAGAAGGAGTGCGACATTAACTGCTTCGGGAGGAGCTTCTTCCGTGTGCTTCTCACCCTGCAATCTCTGGAGCGGATGAAAATCCCATCATCATTCAACCAATGCCTTCAGAATCAACCTACTGGGATGGTTTCTCTGGTTGATCGAAGTGGAAATAAATGGAGTGCAGAGCTGACTTCAGACTCTGAGGGATTCTTCTTTGTGCATGGATGGAAAGAATTTGTCAGAGATAACTCAATTCAGTGTGGTCAATTTTTAGTATTCACTTATGATAAACGGTCACAATTCTCAGTGACAGTCTTTGAACCTTCAGGCATTGACAAGATATCAACTTTCTCTGCTCACCCTTCCAAAAATGTGATCATTAAAACAGAAAGTGATGAAGGGGGCATGGTCACCGCAGCTATCACAACAGAGAAAATGGCTCCCGCCCTGAAGGAAAATAATGGAATCACAGGAAAGAGAACTAGAGATGTAGATTACCTTATGGAAGATAGGGTGGTTGTATTTAAGAAGTCATCTGAGGCTAATGTTTGCGAAAGTTCTAGGAGAAAACGTGCAGGAGCTTCCGCTGGCAAGTCCAAGGTAACATCGACAAGCCATAACAGTACCAGAGGTTCATCATGCAGCTCAGATGAAGATAATTCTTCTAGCAAGTCACCAAATCCACCATTCCTGATGCGCTTTCTGTCTGGTGAGGTGTCTCGGCGTGGTAGATGTGTTTCAAAGGGTCAAAGACAACTAACAGTAATATCACAGAGGCGTCCGGTAACTGAAGCAGAGAAGGACCATGCTCTTCAAAGGGCAAGAGAGTTTAAATCTAAGAATCCTTTTGCCGTGCAAATAATGATGGAGTCATATGTCTATGTTGGATTTTTCATGAATATCCCATGTGAATTTGTCCGTGAGTGTCTTCCCCATACCAACAAAAGGATCACACTCTGGGATCCACAAGGGAAGGCTTGGGAAGTTAACTATGTCTACTACAGTGATCGTTCTGTTGGTTCTTTCAGTGGTGGCTGGGGCAAATTTGCTGTTGGCAACAATCTGGAGAAGTTTGATGTGTGTGTCTTCGAGCTTGTCCAGAAGGATAACATAAAAGTGCACATCTACAGAGTTGTCCCAGAAATTACTCCGCACAAACTCCGTTCTGACCCGAAGTAACATTGCTATGTCGGCATGTTGGAGGCTTCAATTCCATTGATCTGAGGCTGTAGTTGGCAGTTAAAAAACTATTTATATGTTGGTTTCTATAAAAAAAAACAAAATAAGTGCCTAGTTCATAAGTGAACTATTGTTCCGGTTGGGTTGTTGAATGACTAGTTTAGACCTGGTTGTATTGGTTAAGGAGTGTACTATTGTTGCGGACGTGCAGCCATTGTAATGCTAAAATGTAACTTGCATTTTTTTTTGTGGCTGTATAATATTTTTACTGTTATGTTTCATGATATATGTCATAGATAGTTGATTTCATTCAGATTATCATCAAAGTATACTGGCCTGAGATCTGAAAACCAGATGGTGTGAT]
[+] EMBL AK101941             [GCTCGTCTTCCCTCTCCCGACCCGCCACCCGCCTCCTCGCCGGTTTGATTTTTTTTTTCTTTTTGTTCACCCGGCCGGGCGGGGCGAGCTTGCGCTCTCTTTTCTTCCTTCCTTTTTCTTGGATTCTATTTCGGCTTTGGTTGTTCGGTCGGGGGGGGGGGGGGGGCGCAAGAATCGGAGTAGGAGGTCATGGTGGTTAGGGAAAAGCAAGGTGGCCGGATGGGGAAGGGGAAGGGGAAGGGGAAGGAGAAGGAGTGCGACATTAACTGCTTCGGGAGGAGCTTCTTCCGTGTGCTTCTCACCCTGCAATCTCTGGAGCGGATGAAAATCCCATCATCATTCAACCAATGCCTTCAGAATCAACCTACTGGGATGGTTTCTCTGGTTGATCGAAGTGGAAATAAATGGAGTGCAGAGCTGACTTCAGACTCTGAGGGATTCTTCTTTGTGCATGGATGGAAAGAATTTGTCAGAGATAACTCAATTCAGTGTGGTCAATTTTTAGTATTCACTTATGATAAACGGTCACAATTCTCAGTGACAGTCTTTGAACCTTCAGGCATTGACAAGATATCAACTTTCTCTGCTCACCCTTCCAAAAATGTGATCATTAAAACAGAAAGTGATGAAGGGGGCATGGTCACCGCAGCTATCACAACAGAGAAAATGGCTCCCGCCCTGAAGGAAAATAATGGAATCACAGGAAAGAGAACTAGAGATGTAGATTACCTTATGGAAGATAGGGTGGTTGTATTTAAGAAGTCATCTGAGGCTAATGTTTGCGAAAGTTCTAGGAGAAAACGTGCAGGAGCTTCTGCTGGCAAGTCCAAGGTAACATCGACAAGCCATAACAGTACCAGAGGTTCATCATGCAGCTCAGATGAAGATAATTCTTCTAGCAAGTCACCAAATCCACCATTCCTGATGCGCTTTCTGTCTGGTGAGGTGTCTCGGCGTGGTAGATGTGTTTCAAAGGGTCAAAGACAACTAACAGTAATATCACAGAGGCGTCCGGTAACTGAAGCAGAGAAGGACCATGCTCTTCAAAGGGCAAGAGAGTTTAAATCTAAGAATCCTTTTGCCGTGCAAATAATGATGGAGTCATATGTCTATGTTGGATTTTTCATGAATATCCCATGTGAATTTGTCCGTGAGTGTCTTCCCCATACCAACAAAAGGATCACACTCTGGGATCCACAAGGGAAGGCTTGGGAAGTTAACTATGTCTACTACAGTGATCGTTCTGTTGGTTCTTTCAGTGGTGGCTGGGGCAAATTTGCTGTTGGCAACAATCTGGAGAAGTTTGATGTGTGTGTCTTCGAGCTTGTCCAGAAGGATAACATAAAAGTGCACATCTACAGAGTTGTCCCAGAAATTACTCCGCACAAACTCCGTTCTGACCCGAAGTAACATTGCTATGTCGGCATGTTGGAGGCTTCAATTCCATTGATCTGAGGCTGTAGTTGGCAGTTAAAAAACTATTTATATGTTGGTTTCTATAAAAAAAAACAAAATAAGTGCCTAGTTCATAAGTGAACTATTGTTCCGGTTGGGTTGTTGAATGACTAGTTTAGACCTGGTTGTATTGGTTAAGGAGTGTACTATTGTTGCGGACGTGCAGCCATTGTAATGCTAAAATGTAACTTGCATTTTTTT                                                                                                                      ]


>consensus_6600#0 GCTCGTCTTCCCTCTCCCGACCCGCCACCCGCCTCCTCGCCGGTTTGATTTTTTTTTTCT TTTTGTTCACCCGGCCGGGCGGGGCGAGCTTGCGCTCTCTTTTCTTCCTTCCTTTTTCTT GGATTCTATTTCGGCTTTGGTTGTTCGGTCGGGGGGGGGGGGGGGGCGCAAGAATCGGAG TAGGAGGTCATGGTGGTTAGGGAAAAGCAAGGTGGCCGGATGGGGAAGGGGAAGGGGAAG GGGAAGGAGAAGGAGTGCGACATTAACTGCTTCGGGAGGAGCTTCTTCCGTGTGCTTCTC ACCCTGCAATCTCTGGAGCGGATGAAAATCCCATCATCATTCAACCAATGCCTTCAGAAT CAACCTACTGGGATGGTTTCTCTGGTTGATCGAAGTGGAAATAAATGGAGTGCAGAGCTG ACTTCAGACTCTGAGGGATTCTTCTTTGTGCATGGATGGAAAGAATTTGTCAGAGATAAC TCAATTCAGTGTGGTCAATTTTTAGTATTCACTTATGATAAACGGTCACAATTCTCAGTG ACAGTCTTTGAACCTTCAGGCATTGACAAGATATCAACTTTCTCTGCTCACCCTTCCAAA AATGTGATCATTAAAACAGAAAGTGATGAAGGGGGCATGGTCACCGCAGCTATCACAACA GAGAAAATGGCTCCCGCCCTGAAGGAAAATAATGGAATCACAGGAAAGAGAACTAGAGAT GTAGATTACCTTATGGAAGATAGGGTGGTTGTATTTAAGAAGTCATCTGAGGCTAATGTT TGCGAAAGTTCTAGGAGAAAACGTGCAGGAGCTTCCGCTGGCAAGTCCAAGGTAACATCG ACAAGCCATAACAGTACCAGAGGTTCATCATGCAGCTCAGATGAAGATAATTCTTCTAGC AAGTCACCAAATCCACCATTCCTGATGCGCTTTCTGTCTGGTGAGGTGTCTCGGCGTGGT AGATGTGTTTCAAAGGGTCAAAGACAACTAACAGTAATATCACAGAGGCGTCCGGTAACT GAAGCAGAGAAGGACCATGCTCTTCAAAGGGCAAGAGAGTTTAAATCTAAGAATCCTTTT GCCGTGCAAATAATGATGGAGTCATATGTCTATGTTGGATTTTTCATGAATATCCCATGT GAATTTGTCCGTGAGTGTCTTCCCCATACCAACAAAAGGATCACACTCTGGGATCCACAA GGGAAGGCTTGGGAAGTTAACTATGTCTACTACAGTGATCGTTCTGTTGGTTCTTTCAGT GGTGGCTGGGGCAAATTTGCTGTTGGCAACAATCTGGAGAAGTTTGATGTGTGTGTCTTC GAGCTTGTCCAGAAGGATAACATAAAAGTGCACATCTACAGAGTTGTCCCAGAAATTACT CCGCACAAACTCCGTTCTGACCCGAAGTAACATTGCTATGTCGGCATGTTGGAGGCTTCA ATTCCATTGATCTGAGGCTGTAGTTGGCAGTTAAAAAACTATTTATATGTTGGTTTCTAT AAAAAAAAACAAAATAAGTGCCTAGTTCATAAGTGAACTATTGTTCCGGTTGGGTTGTTG AATGACTAGTTTAGACCTGGTTGTATTGGTTAAGGAGTGTACTATTGTTGCGGACGTGCA GCCATTGTAATGCTAAAATGTAACTTGCATTTTTTTTTGTGGCTGTATAATATTTTTACT GTTATGTTTCATGATATATGTCATAGATAGTTGATTTCATTCAGATTATCATCAAAGTAT ACTGGCCTGAGATCTGAAAACCAGATGGTGTGAT



consensusID : consensus_6600#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 637
fasta sequence
                              [GCTCGTCTTCCCTCTCCCGACCCGCCACCCGCCTCCTCGCCGGTTTGATTTTTTTTTTCTTTTTGTTCACCCGGCCGGGCGGGGCGAGCTTGCGCTCTCTTTTCTTCCTTCCTTTTTCTTGGATTCTATTTCGGCTTTGGTTGTTCGGTCGGGGACCGATCTCAGCGATGTCGACTACCCTAGATGTAAGCATAATCGACAATTCCGTCCTGTAGAACTAAGAGAGTGTCGACTGCTGCGGAGAAGAATAGAATTCTCGAAGATTGGGAGATGGAACAGTGGACGCCGGGCATCGTCTAGTCATGATTCGCTATGAGTCAGGAGTTCATTACATCTGTAGCTCATATAGTAGCTCGCATGGACCGAGAGCCACTTAAGCGAGAGTGGACTGAAGTTGTTTGCTAGGAGCGTATGAAAATACACACAAGTGCATGTGATGAGCATATTCGGGGGGAAGACCGTGCTCCCACTACCATGTATTCGTGAGAACGTATGGGGATAGGAGCTAGGTAAGTGAAACGAGACCGCTCGCTTCAGTCGAACTAGCAGAGTTGGCCGGAGTTATGGAGGCGAACGGTGACGCGCATCATACACGGCATGATGTGATGATGAACGAAGTATTTATCTGCATGGGCGC]

[+] EMBL AW155303             [GCTCGTCTTCCCTCTCCCGACCCGCCACCCGCCTCCTCGCCGGTTTGATTTTTTTTTTCTTTTTGTTCACCCGGCCGGGCGGGGCGAGCTTGCGCTCTCTTTTCTTCCTTCCTTTTTCTTGGATTCTATTTCGGCTTTGGTTGTTCGGTCGGGGACCGATCTCAGCGATGTCGACTACCCTAGATGTAAGCATAATCGACAATTCCGTCCTGTAGAACTAAGAGAGTGTCGACTGCTGCGGAGAAGAATAGAATTCTCGAAGATTGGGAGATGGAACAGTGGACGCCGGGCATCGTCTAGTCATGATTCGCTATGAGTCAGGAGTTCATTACATCTGTAGCTCATATAGTAGCTCGCATGGACCGAGAGCCACTTAAGCGAGAGTGGACTGAAGTTGTTTGCTAGGAGCGTATGAAAATACACACAAGTGCATGTGATGAGCATATTCGGGGGGAAGACCGTGCTCCCACTACCATGTATTCGTGAGAACGTATGGGGATAGGAGCTAGGTAAGTGAAACGAGACCGCTCGCTTCAGTCGAACTAGCAGAGTTGGCCGGAGTTATGGAGGCGAACGGTGACGCGCATCATACACGGCATGATGTGATGATGAACGAAGTATTTATCTGCATGGGCGC]


>consensus_6600#1 GCTCGTCTTCCCTCTCCCGACCCGCCACCCGCCTCCTCGCCGGTTTGATTTTTTTTTTCT TTTTGTTCACCCGGCCGGGCGGGGCGAGCTTGCGCTCTCTTTTCTTCCTTCCTTTTTCTT GGATTCTATTTCGGCTTTGGTTGTTCGGTCGGGGACCGATCTCAGCGATGTCGACTACCC TAGATGTAAGCATAATCGACAATTCCGTCCTGTAGAACTAAGAGAGTGTCGACTGCTGCG GAGAAGAATAGAATTCTCGAAGATTGGGAGATGGAACAGTGGACGCCGGGCATCGTCTAG TCATGATTCGCTATGAGTCAGGAGTTCATTACATCTGTAGCTCATATAGTAGCTCGCATG GACCGAGAGCCACTTAAGCGAGAGTGGACTGAAGTTGTTTGCTAGGAGCGTATGAAAATA CACACAAGTGCATGTGATGAGCATATTCGGGGGGAAGACCGTGCTCCCACTACCATGTAT TCGTGAGAACGTATGGGGATAGGAGCTAGGTAAGTGAAACGAGACCGCTCGCTTCAGTCG AACTAGCAGAGTTGGCCGGAGTTATGGAGGCGAACGGTGACGCGCATCATACACGGCATG ATGTGATGATGAACGAAGTATTTATCTGCATGGGCGC



consensusID : consensus_6600#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 269
fasta sequence
                              [TTCTTCGGTAGTTCCCGCCGTAATTGTTTCCAGGTTCAAAGACACTACCAGTATTTCACAGGCTCCAGTAACTGAACCAGAGAAGGACCATGCTCTTCAAAGGCAAGAGAGTTTAAATCTAAGAATCCTTTTCCGTGCAAATAATGATGGGAGTCATATGGTCTATGGTTGGATTTGTGTCATGGAATGATCCCATGTGAATTTGTGCCGTGAGTGTCTTTCCCCGTACCACCAAAGGATCACCACTCTGGGAATCCCACCAAGGGAAG]

[+] EMBL BI800120             [TTCTTCGGTAGTTCCCGCCGTAATTGTTTCCAGGTTCAAAGACACTACCAGTATTTCACAGGCTCCAGTAACTGAACCAGAGAAGGACCATGCTCTTCAAAGGCAAGAGAGTTTAAATCTAAGAATCCTTTTCCGTGCAAATAATGATGGGAGTCATATGGTCTATGGTTGGATTTGTGTCATGGAATGATCCCATGTGAATTTGTGCCGTGAGTGTCTTTCCCCGTACCACCAAAGGATCACCACTCTGGGAATCCCACCAAGGGAAG]


>consensus_6600#2 TTCTTCGGTAGTTCCCGCCGTAATTGTTTCCAGGTTCAAAGACACTACCAGTATTTCACA GGCTCCAGTAACTGAACCAGAGAAGGACCATGCTCTTCAAAGGCAAGAGAGTTTAAATCT AAGAATCCTTTTCCGTGCAAATAATGATGGGAGTCATATGGTCTATGGTTGGATTTGTGT CATGGAATGATCCCATGTGAATTTGTGCCGTGAGTGTCTTTCCCCGTACCACCAAAGGAT CACCACTCTGGGAATCCCACCAAGGGAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6600#0      GCTCGTCTTCCCTCTCCCGACCCGCCACCCGCCTCCTCGCCGGTTTGATTTTTTTTTTCT 60
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      ------------------------------------------------------------
                                                                                  

consensus_6600#0      TTTTGTTCACCCGGCCGGGCGGGGCGAGCTTGCGCTCTCTTTTCTTCCTTCCTTTTTCTT 120
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      ------------------------------------------------------------
                                                                                  

consensus_6600#0      GGATTCTATTTCGGCTTTGGTTGTTCGGTCGGGGGGGGGGGGGGGGCGCAAGAATCGGAG 180
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      ------------------------------------------------------------
                                                                                  

consensus_6600#0      TAGGAGGTCATGGTGGTTAGGGAAAAGCAAGGTGGCCGGATGGGGAAGGGGAAGGGGAAG 240
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      ------------------------------------------------------------
                                                                                  

consensus_6600#0      GGGAAGGAGAAGGAGTGCGACATTAACTGCTTCGGGAGGAGCTTCTTCCGTGTGCTTCTC 300
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      ------------------------------------------------------------
                                                                                  

consensus_6600#0      ACCCTGCAATCTCTGGAGCGGATGAAAATCCCATCATCATTCAACCAATGCCTTCAGAAT 360
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      ------------------------------------------------------------
                                                                                  

consensus_6600#0      CAACCTACTGGGATGGTTTCTCTGGTTGATCGAAGTGGAAATAAATGGAGTGCAGAGCTG 420
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      ------------------------------------------------------------
                                                                                  

consensus_6600#0      ACTTCAGACTCTGAGGGATTCTTCTTTGTGCATGGATGGAAAGAATTTGTCAGAGATAAC 480
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      ------------------------------------------------------------
                                                                                  

consensus_6600#0      TCAATTCAGTGTGGTCAATTTTTAGTATTCACTTATGATAAACGGTCACAATTCTCAGTG 540
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      ------------------------------------------------------------
                                                                                  

consensus_6600#0      ACAGTCTTTGAACCTTCAGGCATTGACAAGATATCAACTTTCTCTGCTCACCCTTCCAAA 600
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      ------------------------------------------------------------
                                                                                  

consensus_6600#0      AATGTGATCATTAAAACAGAAAGTGATGAAGGGGGCATGGTCACCGCAGCTATCACAACA 660
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      ------------------------------------------------------------
                                                                                  

consensus_6600#0      GAGAAAATGGCTCCCGCCCTGAAGGAAAATAATGGAATCACAGGAAAGAGAACTAGAGAT 720
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      ------------------------------------------------------------
                                                                                  

consensus_6600#0      GTAGATTACCTTATGGAAGATAGGGTGGTTGTATTTAAGAAGTCATCTGAGGCTAATGTT 780
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      ------------------------------------------------------------
                                                                                  

consensus_6600#0      TGCGAAAGTTCTAGGAGAAAACGTGCAGGAGCTTCCGCTGGCAAGTCCAAGGTAACATCG 840
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      --------------------------GCTCGTCTTCCCTCTCCCGACCCGCCACCCGCCT 34
                                                                                  

consensus_6600#0      ACAAGCCATAACAGTACCAGAGGTTCATCATGCAGCTCAGATGAAGATAATTCTTCTAGC 900
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      CCTCGCCGGTTTGATTTTTTTTTTCTTTTTGTTCACCCGGCCGGGCGGGGCGAGCTTGCG 94
                                                                                  

consensus_6600#0      AAGTCACCAAATCCACCATTCCTGATGCGCTTTCTGTCTGGTGAGGTGTCTCGGCGTGGT 960
consensus_6600#2      ---------------------------------TTCTTCGGTAGT---TCCCGCCGTAAT 24
consensus_6600#1      CTCTCTTTTCTTCCTTCCTTTTTCTTGGATTCTATTTCGGCTTTGGTTGTTCGGTCGGGG 154
                                                        * *  * *         **       

consensus_6600#0      AGATGTGTTTCAAAGG-GTCAAAGACAACTAACAGTAATATCACAGAGGCGTCCGGTAAC 1019
consensus_6600#2      -----TGTTTCCA-GG-TTCAAAGACA-CTACCAG---TATTTCACAGGC-TCCAGTAAC 72
consensus_6600#1      A--CCGATCTCAGCGATGTCGACTACCCTAGATGTAAGCATAATCGACAATTCCGTCCTG 212
                             * **   *   ** *  **             **     *    ***      

consensus_6600#0      T-GAAGCAGAGAAGGACCATGCTCTTCAAAGGGCAAGAGAGTTTAAATCTAAGAATCCTT 1078
consensus_6600#2      T-GAACCAGAGAAGGACCATGCTCTTCAAAGG-CAAGAGAGTTTAAATCTAAGAATCCTT 130
consensus_6600#1      TAGAACTAAGAGAGTGTCGACTGCTGCGGAGAAGAATAGAATTC----TCGAAGATTGGG 268
                      * ***  *    **   *     ** *  **   ** *** **        *  **    

consensus_6600#0      TTGCCGTGCAAATAATGATGG-AGTCATATG-TCTATG-TTGGATTTTT--CATGAAT-- 1131
consensus_6600#2      TT-CCGTGCAAATAATGATGGGAGTCATATGGTCTATGGTTGGATTTGTGTCATGGAATG 189
consensus_6600#1      AGATGGAACAGTGGACGCCGGGCATCGTCTAGTC-ATGATTCGCTATGAGTCAGGAGTTC 327
                           *  **    * *  **   ** * *  ** *** ** * * *    ** *     

consensus_6600#0      ATCCCATGTG-AATTTGT-CCGTGAGTGTCTT---CCCCATACCAACAAAAGGATCACAC 1186
consensus_6600#2      ATCCCATGTG-AATTTGTGCCGTGAGTGTCTTT--CCCCGTACCACCAAAGGATCACCAC 246
consensus_6600#1      ATTACATCTGTAGCTCATATAGTAGCTCGCATGGACCGAGAGCCACTTAAGCGAGAGTGG 387
                      **  *** ** *  *  *   **   *  * *   **     ***   **          

consensus_6600#0      TCTGGGA--TCCACAAGGGAAGGCTTGGGAAGTTAACTATGTCTACTACAGTGATCGTTC 1244
consensus_6600#2      TCTGGGAATCCCACCAAGGGAAG------------------------------------- 269
consensus_6600#1      ACTGAAGTTGTTTGCTAGGAGCGTATGAAAATACACACAAGTGCA-TGTGATGAGCATAT 446
                       ***             **   *                                     

consensus_6600#0      TGTTGGTTCTTTCAGTGGTGGCTGGGGCAAATTTGCTGTTGGCAACAATCTGGAGAAGTT 1304
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      TCGGGGGGAAGACCGTGCTCCCACTACCATGTAT-TCGTGAGAACGTATGGGGATAGGAG 505
                                                                                  

consensus_6600#0      TGATGTGTGTGTCTTCGAGCTTGTCCAGAAGGATAACATAAAAGTGCACATCTACAGAGT 1364
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      CTAGGTAAGTGAAACGAGACCGCTCGCTTCAGTCGAACTAGCAGAGTTGGCCGGAGTTAT 565
                                                                                  

consensus_6600#0      TGTCCCAGAAATTACTCCGCACAAACTCCGTTCTGACCCGAAGTAACATTGCTATGTCGG 1424
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      GGAGGCGAACGGTGACGCGCATCATACACGGCATGATGTGATGATGAACGAAGTATTTAT 625
                                                                                  

consensus_6600#0      CATGTTGGAGGCTTCAATTCCATTGATCTGAGGCTGTAGTTGGCAGTTAAAAAACTATTT 1484
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      CTGCATGGGCGC------------------------------------------------ 637
                                                                                  

consensus_6600#0      ATATGTTGGTTTCTATAAAAAAAAACAAAATAAGTGCCTAGTTCATAAGTGAACTATTGT 1544
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      ------------------------------------------------------------
                                                                                  

consensus_6600#0      TCCGGTTGGGTTGTTGAATGACTAGTTTAGACCTGGTTGTATTGGTTAAGGAGTGTACTA 1604
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      ------------------------------------------------------------
                                                                                  

consensus_6600#0      TTGTTGCGGACGTGCAGCCATTGTAATGCTAAAATGTAACTTGCATTTTTTTTTGTGGCT 1664
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      ------------------------------------------------------------
                                                                                  

consensus_6600#0      GTATAATATTTTTACTGTTATGTTTCATGATATATGTCATAGATAGTTGATTTCATTCAG 1724
consensus_6600#2      ------------------------------------------------------------
consensus_6600#1      ------------------------------------------------------------
                                                                                  

consensus_6600#0      ATTATCATCAAAGTATACTGGCCTGAGATCTGAAAACCAGATGGTGTGAT 1774
consensus_6600#2      --------------------------------------------------
consensus_6600#1      --------------------------------------------------
                                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)