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Oryza sativa
cluster # 6630 cluster # 6630       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6630#0 length = 1780 sequences # 4  

consensusID : consensus_6630#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1780
fasta sequence
                              [AACCCTAGCAAGAGGGGGAGAAAAAGAGGAGGAAGAGGGGAGGGAAGGGAGAAGAAAGTGGAGGAGATCAGCAGCAGCAGCAGCAGCCGCGGCCGCGGCCGCCGGAGGATGGCGCCGGTGAAGAAGTCCAAGAAAGGGAAGCGCAAGTCCAAGGACTCCGGCAAGCTCAAGATCGTCAAGTATGGCGGCGGCGCCCCTCCCCTCCCCCCCGAGCTCCGCGGCCTCGACACCGAGTGGTGGTACACCTTCCTCCACAAGCACTCCGAGCTAGGTCTGAGCGCGCCGTCAGATGAGGGGGAGGCGTTCAGGTATTTCTTCAGGACGTCGAGGAGGACGTTCGACTACATCTGCTCGATTGTGAGGGAGGATTTGATCTCTAGGCCGCCGTCAGGGCTGATCAACATCGAGGGGAGGCTGCTCAGTGTGGAGAAGCAGGTGGCGATTGCCATGAGGAGGCTGGCGTCGGGCGATTCGCAGGTGTCGGTGGGGGCGGCTTTTGGTGTCGGGCAGTCCACCGTCTCGCAGGTGACTTGGAGGTTCATCGAGTCGATGGAAGAGCGGGCTCGGCATCATCTGGTGTGGCCCGGGCAGGAGAGGATGGAGCAGATCAAGGCGAGGTTCGAGGCCGAGTCCGGTCTGCCGAATTGTTGCGGCGCCATCGATGCGACCCACATTATCATGACGCTTCCTGCTGTCGAGTCGTCTGAGGATTGGTGCGACCCGGCGAAGAATTACAGCATGTTCCTGCAGGGGATTGTTGATGATGAGATGAGGTTTATTGATATTGTCACTGGTTGGCCTGGCAGCATGATGTTTTCGCGGTTGCTGAAGTGCTCTGGGTTTTTCAAGCACTGCGATGCTGGGACTCGCTTGGATGGCCCTGTCATGGTTTCAGCAGAGAATGGAGAAATCAGGGAGTACATTGTTGGTAACAATTGTTATCCTTTACTCCCATGGCTTATGACTCCCTATGAAGGGGAGAGTCTGTCTGCTCCAATGGCCAGCTTTAATGCTAGGCAGAAGGCTGCAAGAACGCTTGGACCAAGAGCACTGTCACGGCTGAAGGGCTCCTGGAGGATCTTAAACAAAGTCATGTGGAGGCCTGATAAGAACAAGTTGCCGAGCATAATTCTTGTCTGCTGTTTGCTTCACAATATAATCATAGACTGTGAAGACGAACTGCTTCCAGATGTACAACTTCCAGATCGCCATGATACTGGTTATAGTGAAGAGAAGTGCGAGCAAGTGGATCCTAATGGCAAGATAATGAGAGATGTCATTACAGGATATCTTCAAATCTAAGAAGCTTCCCATTGAACTTAGCTAAGCTGACTGGCAGTACTCTGGAGTTGCAAGAAGGCATCTCTGTTCTTATGTTTTTCTCCTCAGTTGTCCTTGTTGTAATCAGACCTGCTGGTCTCCATTCGGTAAAGATTAGCAATGAAATAATTCAGTTAGGAATTAGCTAGCTCAGGAGCAAACTATCTCTTCCTTGAGTTAAGGAAAAAATGTTAATGTGTTCATGGTGATGACAATCTCCATCATTTTGAGGTACAAGATATATCAGTGGTCAATTGCTTTGAATGAAGGAAATCGCCTTTAAGGAGAGTAGCTATTCAACTTTGTTTTATAAATGTTTAGATTTGCATAATATAGTAAAACTCATGCTCGCATGTTATTAAAGCATATCCAAGAAAAATAGTAACCTATATATGACATGTTGAGTTGAGTGAACTAGTCTTGGATGTACATCATCTCATTTTCATTTTATTGCAAGGCT]

[+] EMBL AK064387             [AACCCTAGCAAGAGGGGGAGAAAAAGAGGAGGAAGAGGGGAGGGAAGGGAGAAGAAAGTGGAGGAGATCAGCAGCAGCAGCAGCAGCCGCGGCCGCGGCCGCCGGAGGATGGCGCCGGTGAAGAAGTCCAAGAAAGGGAAGCGCAAGTCCAAGGACTCCGGCAAGCTCAAGATCGTCAAGTATGGCGGCGGCGCCCCTCCCCTCCCCCCCGAGCTCCGCGGCCTCGACACCGAGTGGTGGTACACCTTCCTCCACAAGCACTCCGAGCTAGGTCTGAGCGCGCCGTCAGATGAGGGGGAGGCGTTCAGGTATTTCTTCAGGACGTCGAGGAGGACGTTCGACTACATCTGCTCGATTGTGAGGGAGGATTTGATCTCTAGGCCGCCGTCAGGGCTGATCAACATCGAGGGGAGGCTGCTCAGTGTGGAGAAGCAGGTGGCGATTGCCATGAGGAGGCTGGCGTCGGGCGATTCGCAGGTGTCGGTGGGGGCGGCTTTTGGTGTCGGGCAGTCCACCGTCTCGCAGGTGACTTGGAGGTTCATCGAGTCGATGGAAGAGCGGGCTCGGCATCATCTGGTGTGGCCCGGGCAGGAGAGGATGGAGCAGATCAAGGCGAGGTTCGAGGCCGAGTCCGGTCTGCCGAATTGTTGCGGCGCCATCGATGCGACCCACATTATCATGACGCTTCCTGCTGTCGAGTCGTCTGAGGATTGGTGCGACCCGGCGAAGAATTACAGCATGTTCCTGCAGGGGATTGTTGATGATGAGATGAGGTTTATTGATATTGTCACTGGTTGGCCTGGCAGCATGATGTTTTCGCGGTTGCTGAAGTGCTCTGGGTTTTTCAAGCACTGCGATGCTGGGACTCGCTTGGATGGCCCTGTCATGGTTTCAGCAGAGAATGGAGAAATCAGGGAGTACATTGTTGGTAACAATTGTTATCCTTTACTCCCATGGCTTATGACTCCCTATGAAGGGGAGAGTCTGTCTGCTCCAATGGCCAGCTTTAATGCTAGGCAGAAGGCTGCAAGAACGCTTGGACCAAGAGCACTGTCACGGCTGAAGGGCTCCTGGAGGATCTTAAACAAAGTCATGTGGAGGCCTGATAAGAACAAGTTGCCGAGCATAATTCTTGTCTGCTGTTTGCTTCACAATATAATCATAGACTGTGAAGACGAACTGCTTCCAGATGTACAACTTCCAGATCGCCATGATACTGGTTATAGTGAAGAGAAGTGCGAGCAAGTGGATCCTAATGGCAAGATAATGAGAGATGTCATTACAGGATATCTTCAAATCTAAGAAGCTTCCCATTGAACTTAGCTAAGCTGACTGGCAGTACTCTGGAGTTGCAAGAAGGCATCTCTGTTCTTATGTTTTTCTCCTCAGTTGTCCTTGTTGTAATCAGACCTGCTGGTCTCCATTCGGTAAAGATTAGCAATGAAATAATTCAGTTAGGAATTAGCTAGCTCAGGAGCAAACTATCTCTTCCTTGAGTTAAGGAAAAAATGTTAATGTGTTCATGGTGATGACAATCTCCATCATTTTGAGGTACAAGATATATCAGTGGTCAATTGCTTTGAATGAAGGAAATCGCCTTTAAGGAGAGTAGCTATTCAACTTTGTTTTATAAATGTTTAGATTTGCATAATATAGTAAAACTCATGCTCGCATGTTATTAAAGCATATCCAAGAAAAATAGTAACCTATATATGACATGTTGAGTTGAGTGAACTAGTCTTGGATGTACATCATCTCATTTTCATTTTATTGCAAGGCT]
[+] EMBL AK102660             [  CCCTAGCAAGAGGGGGAGAAAAAGAGGAGGAAGAGGGGAGGGAAGGGAGAAGAAAGTGGAGGAGATCAGCAGCAGCAGCAGCAGCCGCGGCCGCGGCCGCCGGAGGATGGCGCCGGTGAAGAAGTCCAAGAAAGGGAAGCGCAAGTCCAAGGACTCCGGCAAGCTCAAGATCGTCAAGTATGGCGGCGGCGCCCCTCCCCTCCCCCCCGAGCTCCGCGGCCTCGACACCGAGTGGTGGTACACCTTCCTCCACAAGCACTCCGAGCTAGGTCTGAGCGCGCCGTCAGATGAGGGGGAGGCGTTCAGGTATTTCTTCAGGACGTCGAGGAGGACGTTCGACTACATCTGCTCGATTGTGAGGGAGGATTTGATCTCTAGGCCGCCGTCAGGGCTGATCAACATCGAGGGGAGGCTGCTCAGTGTGGAGAAGCAGGTGGCGATTGCCATGAGGAGGCTGGCGTCGGGCGATTCGCAGGTGTCGGTGGGGGCGGCTTTTGGTGTCGGGCAGTCCACCGTCTCGCAGGTGACTTGGAGGTTCATCGAGTCGATGGAAGAGCGGGCTCGGCATCATCTGGTGTGGCCCGGGCAGGAGAGGATGGAGCAGATCAAGGCGAGGTTCGAGGCCGAGTCCGGTCTGCCGAATTGTTGCGGCGCCATCGATGCGACCCACATTATCATGACGCTTCCTGCTGTCGAGTCGTCTGAGGATTGGTGCGACCCGGCGAAGAATTACAGCATGTTCCTGCAGGGGATTGTTGATGATGAGATGAGGTTTATTGATATTGTCACTGGTTGGCCTGGCAGCATGATGTTTTCGCGGTTGCTGAAGTGCTCTGGGTTTTTCAAGCACTGCGATGCTGGGACTCGCTTGGATGGCCCTGTCATGGTTTCAGCAGAGAATGGAGAAATCAGGGAGTACATTGTTGGTAACAATTGTTATCCTTTACTCCCATGGCTTATGACTCCCTATGAAGGGGAGAGTCTGTCTGCTCCAATGGCCAGCTTTAATGCTAGGCAGAAGGCTGCAAGAACGCTTGGACCAAGAGCACTGTCACGGCTGAAGGGCTCCTGGAGGATCTTAAACAAAGTCATGTGGAGGCCTGATAAGAACAAGTTGCCGAGCATAATTCTTGTCTGCTGTTTGCTTCACAATATAATCATAGACTGTGAAGACGAACTGCTTCCAGATGTACAACTTCCAGATCACCATGATACTGGTTATAGTGAAGAGAAGTGCGAGCAAGTGGATCCTAATGGCAAGATAATGAGAGATGTCATTACAGGATATCTTCAAATCTAAGAAGCTTCCCATTGAACTTAGCTAAGCTGACTGGCAGTACTCTGGAGTTGCAAGAAGGCATCTCTGTTCTTATGTTTTTCTCCTCAGTTGTCCTTGTTGTAATCAGACCTGCTGGTCTCCATTCGGTAAAGATTAGCAATGAAATAATTCAGTTAGGAATTAGCTAGCTCAGGAGCAAACTATCTCTTCCTTGAGTTAAGGAAAAAATGTTAATGTGTTCATGGTGATGACAATCTCCATCATTTTGAGGTACAAGATATATCAGTGGTCAATT                                                                                                                                                                                                            ]
[+] EMBL CB638400             [                                                                      GCAGCAGCACCAGCAGCCGCGGCCGCAGCCGCCGGCAGATGGCGCCGGTGAATAAGTCCAACAAAGGGAAGCGCAAGTCCAAGGACTCCGGCAAGCTCAAGATCGTCAAGTATGGCGGCGGCGCCCCTCCCCTCCCCCCCGAGCTCCGCGGCCTCGACACCGAGTGGTGGTACACCTTCCTCCACAAGCACTCCGAGCTAGGTCTGAGCGCGCCGTCAGATGAGGGGGAGGCGTTCACGTATTTCTTCAGGACGTCGAGGAGGACGTTCGACTACATCTGCTCGATTGTGAGGGAGGATTTGATCTCTACGCCGCCGTCAGGGCTGATCAACATCGAGGGGAGGCTGCTCAGTGTGGAGAAGCACGTGGCGATTGCCATGAGGAGGCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA767546             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CGCGGTTGCTGAAGTGCTCTGGGTTTTT AAGCACTGCGATGCTGGGACTCGCTTGGACGGCCCTGTCATGGTTTCAGCAGAGAATGGAGAAATCAGGGAGTACATTGTTGGTAACAATTGTTATCCTTTACTCCCATGGCTTATGACTCCCTATGAAGGGGAGAGTCTGTCTGCTCCAATGGCCAGCTTTAATGCTAGGCAGAAGGCTGCAAGAACGCTTGGACCAAGAGCACTGTCACGGCTGAAGGGCTCCTGGAGGATCTTAAACAAAGTCATGTGGAGGCCTGATAAGAACAAGTTGCCGAGCATAATTCTTGTCTGCTGTTTGCTTCACAATATAATCATAGACTGTGAAGACGAACTGCTTCCAGATGTACAACTTCCAGATCGCCATGATACTGGTTATAGTGAAGAGAAGTGCGAGCAAGTGGATCCTAATGGCAAGATAATGAGAGATGTCATTACAGGATATCTTCAAATCTAAGAAGCTTCCCATTGAACTTAGCTAAGCTGACTGGCAGTACTCTGGAGTTGCAAGAAGGCATCTCTGTTCTTATGTTTTTCTCCTCAGTTGTCCTTGNTGTAATCAGACCTGCTGGTCTNCATTCGGTAAAGATTAGCAATGAAATAATTCAGTTAGGAATTAGCTAGCTCANGGGCAAACTATCTCTTNCTTGAGTTAAGGAAAAntgg                                                                                                                                                                                                                                                                             ]


>consensus_6630#0 AACCCTAGCAAGAGGGGGAGAAAAAGAGGAGGAAGAGGGGAGGGAAGGGAGAAGAAAGTG GAGGAGATCAGCAGCAGCAGCAGCAGCCGCGGCCGCGGCCGCCGGAGGATGGCGCCGGTG AAGAAGTCCAAGAAAGGGAAGCGCAAGTCCAAGGACTCCGGCAAGCTCAAGATCGTCAAG TATGGCGGCGGCGCCCCTCCCCTCCCCCCCGAGCTCCGCGGCCTCGACACCGAGTGGTGG TACACCTTCCTCCACAAGCACTCCGAGCTAGGTCTGAGCGCGCCGTCAGATGAGGGGGAG GCGTTCAGGTATTTCTTCAGGACGTCGAGGAGGACGTTCGACTACATCTGCTCGATTGTG AGGGAGGATTTGATCTCTAGGCCGCCGTCAGGGCTGATCAACATCGAGGGGAGGCTGCTC AGTGTGGAGAAGCAGGTGGCGATTGCCATGAGGAGGCTGGCGTCGGGCGATTCGCAGGTG TCGGTGGGGGCGGCTTTTGGTGTCGGGCAGTCCACCGTCTCGCAGGTGACTTGGAGGTTC ATCGAGTCGATGGAAGAGCGGGCTCGGCATCATCTGGTGTGGCCCGGGCAGGAGAGGATG GAGCAGATCAAGGCGAGGTTCGAGGCCGAGTCCGGTCTGCCGAATTGTTGCGGCGCCATC GATGCGACCCACATTATCATGACGCTTCCTGCTGTCGAGTCGTCTGAGGATTGGTGCGAC CCGGCGAAGAATTACAGCATGTTCCTGCAGGGGATTGTTGATGATGAGATGAGGTTTATT GATATTGTCACTGGTTGGCCTGGCAGCATGATGTTTTCGCGGTTGCTGAAGTGCTCTGGG TTTTTCAAGCACTGCGATGCTGGGACTCGCTTGGATGGCCCTGTCATGGTTTCAGCAGAG AATGGAGAAATCAGGGAGTACATTGTTGGTAACAATTGTTATCCTTTACTCCCATGGCTT ATGACTCCCTATGAAGGGGAGAGTCTGTCTGCTCCAATGGCCAGCTTTAATGCTAGGCAG AAGGCTGCAAGAACGCTTGGACCAAGAGCACTGTCACGGCTGAAGGGCTCCTGGAGGATC TTAAACAAAGTCATGTGGAGGCCTGATAAGAACAAGTTGCCGAGCATAATTCTTGTCTGC TGTTTGCTTCACAATATAATCATAGACTGTGAAGACGAACTGCTTCCAGATGTACAACTT CCAGATCGCCATGATACTGGTTATAGTGAAGAGAAGTGCGAGCAAGTGGATCCTAATGGC AAGATAATGAGAGATGTCATTACAGGATATCTTCAAATCTAAGAAGCTTCCCATTGAACT TAGCTAAGCTGACTGGCAGTACTCTGGAGTTGCAAGAAGGCATCTCTGTTCTTATGTTTT TCTCCTCAGTTGTCCTTGTTGTAATCAGACCTGCTGGTCTCCATTCGGTAAAGATTAGCA ATGAAATAATTCAGTTAGGAATTAGCTAGCTCAGGAGCAAACTATCTCTTCCTTGAGTTA AGGAAAAAATGTTAATGTGTTCATGGTGATGACAATCTCCATCATTTTGAGGTACAAGAT ATATCAGTGGTCAATTGCTTTGAATGAAGGAAATCGCCTTTAAGGAGAGTAGCTATTCAA CTTTGTTTTATAAATGTTTAGATTTGCATAATATAGTAAAACTCATGCTCGCATGTTATT AAAGCATATCCAAGAAAAATAGTAACCTATATATGACATGTTGAGTTGAGTGAACTAGTC TTGGATGTACATCATCTCATTTTCATTTTATTGCAAGGCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)